Cucumis melo (muskmelon): 103485130
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Entry
103485130 CDS
T03195
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103485130
Enzymes [BR:
cmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
103485130
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
103485130
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
103485130
NCBI-ProteinID:
XP_016899320
UniProt:
A0A1S4DUC2
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Position
8:6113327..6120895
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AA seq
613 aa
AA seq
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MKIVTYNVNGLRPRIAQFGSLLKLLDSFDADIICIQETKLRRQELRADLVIADGYETFVS
CTRTSEKGRTGYSGVATFCRVKSAFSSNEVALPVRAEEGFTGLLESSQDGKRTMGAVAEG
LEEFSKEELLQLDSEGRCIVTDHGHFVLFNIYGPRAESDDSDRVLFKLKFYNVLQKRWEH
LLHMGKRVFVVGDLNIAPTSMDRCDAGPDFENNEFRRWLRSLLVACGGRFIDVFRAKHPD
RRDAYTCWPQSTGAEVFNYGTRIDHILCAGPCLHHDNSLPGHNIVACHVMECDILSQYKR
WKDGNSFRWKGEQSVKLEGSDHAPVSASLLEIPDTPQHSTPSLSARYNPKIHGLQQTLVS
MLLKRQAAEDSAPCKKSNSSSRGNIILGNCSQGFNGSFNNGDQPGVLPSESCSLTNLETE
DSLLKTGECAGGSYAEEAACNTLISHESLHAKALPENETRKRVKRCSQMSLKSFFQKNSV
VSNDANSSNADSPISKAETSESNPIEIPRSNTQSDSGRQLEAYQDQSQINASPVEKEKSG
VALLEWRRIQQVMQNSIPLCKGHKETCVARVVKKQGPNNGRRFYVCARAEGPASNPEANC
GYFKWAASKSRHK
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacttacaacgtgaatggtctaaggccacgcatcgcacaatttggttca
cttcttaaattgctcgattccttcgatgccgatatcatttgcattcaggaaacgaaatta
agaaggcaggaattgcgagcggatttagtcatagccgatggttacgaaacattcgtttct
tgcactcgtacctctgagaaaggtcgaaccggttactcaggggttgctacattttgccgt
gttaagtcagcattttcgagtaatgaagtagcattgccggttcgtgcggaggaaggtttc
acaggtcttctagaaagttcacaggatggaaaacgcacaatgggtgcagttgcagaagga
cttgaggaattttcgaaagaggagctccttcaattagacagcgaggggcgttgtatagtc
acagatcatggccattttgttctcttcaacatttatgggcctcgagctgaaagtgatgat
tcagacagggtgctgttcaagttaaaattttacaatgtgctacagaaaagatgggagcat
cttctgcatatgggaaaaagggtatttgtcgttggtgatcttaatattgcacctacttca
atggatcgctgtgatgcaggaccagattttgagaataatgagtttcggagatggctgaga
tctttgctggtggcatgtggtggccgtttcatcgacgtttttagagcaaaacatcctgat
cgaagagatgcatatacatgctggcctcaaagtacaggtgcggaagtattcaattatggg
acaaggatcgaccatatattgtgtgcaggaccatgcttacatcacgacaacagcctgccg
ggccataatattgtagcttgtcatgttatggaatgtgacatactgtcacagtacaaacgc
tggaaagatggaaattcttttaggtggaagggagagcagtctgttaaattagaaggttct
gatcatgcaccggtttctgcaagtctactggaaatccctgatactcctcaacatagtact
ccatctttgtctgcaagatacaaccccaagattcacgggcttcagcaaactcttgtgtca
atgcttctaaaaagacaagctgctgaagattcagcaccgtgcaaaaaatcaaactcatct
tcacgtgggaacatcattttagggaattgttctcaaggatttaatggatcatttaataat
ggtgaccaaccgggtgttcttccaagtgaatcttgttctttgacaaacctagaaacagaa
gattctctattaaaaacaggtgagtgtgctggtggaagttatgccgaggaggctgcatgc
aacactttaatttcgcacgagtctctacatgcgaaagcattacctgagaatgaaactagg
aaaagagttaaaaggtgttcccagatgtcattaaagtcattcttccagaaaaattcagtt
gttagcaacgatgctaacagctctaatgcagattctccaatcagcaaagcagagacctcc
gagtctaatcctattgaaattcctagatcaaatactcaaagcgactcaggtcgacagtta
gaagcatatcaggatcagtctcaaattaatgcctctcctgtagagaaagaaaagagtggt
gttgccttgctggaatggcggaggatacaacaggttatgcagaatagcattcccctttgc
aagggccataaggagacttgtgttgctcgagtagttaagaaacaaggtcctaataatggc
cgcagattttatgtttgtgctcgtgcggagggtcccgcatctaatcctgaagcaaattgt
ggttactttaaatgggcggcttccaaatctcggcataaataa
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