Cucumis melo (muskmelon): 103485257
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Entry
103485257 CDS
T03195
Name
(RefSeq) autophagy-related protein 13b isoform X1
KO
K08331
autophagy-related protein 13
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103485257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103485257
03029 Mitochondrial biogenesis [BR:
cmo03029
]
103485257
Membrane trafficking [BR:
cmo04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103485257
Atg1 complex
103485257
Mitochondrial biogenesis [BR:
cmo03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103485257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103485257
NCBI-ProteinID:
XP_008441017
UniProt:
A0A1S3B2G3
LinkDB
All DBs
Position
8:7161769..7169610
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AA seq
644 aa
AA seq
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MASSHNTHSETAKVEQILTEFFPKTLQIILESRAPCISSRNFSGEQVLSSPSSSSSSSSS
MRPRDKWFNLALRECSATLENIDLWRPNYHEPMVVDVILVQRQFGLDSVNASPRKDLVRH
LSLKEKYPLSFNSDKDEFGSQTKSEKVVERWMVHYESRKNRDSNSGSRRSSNSTAHTYKK
TILLLRSLYAFVRLLPAYKVFQDISSSGQIHPFTLAHRVSSFVEPFTRREEAEMQRFVFT
PVDTSCGRLCLSVLYRSSLSDINSEPSTPMSPQVIPEYVGSPLADPLKRFPTLPVTIAPS
HGSPSSLPFSRRHSWSYDRFRPSPPSVSFSPSPTHSESHALISNPAFPRLPPSSLPSQLP
EMVIGHKDNMNYDEYYPSPVFSQSPSLSPPIRIPVKRLPNGLLQSESAPPSAPIAKLPHS
PALSSKPNLPPSPPLKASGAIISRINRDVGPLPAGSAIGKSSSLGRDESRRISGWRVSSN
NSPISRSSSRSFPDDLDDPEFPCPFDVDEDEMTDRGSRPESFDQKGNLCDMLEPGGFFPL
RKSQDAAVGALVRMLQKAPPLRQDFTNSTADLGQPPTPDSPSRNIQLGNQISESLASKSR
YAPSSSIAASGLFVPKTTADALEELQSYREMKNLLLRQAGKTHT
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcataatactcattccgagacggcaaaagttgagcaaattttaactgaa
ttctttcccaaaacgctacaaattatactggaatcgagggccccttgtatttcatcgcgt
aattttagtggtgaacaagttctgtcttctccatcttcctcctcctcgtcttcctcgagt
atgaggccaagggacaaatggtttaatttggctcttcgtgaatgctctgcaacgttagag
aatattgatctctggcgtccgaattatcatgaacctatggttgttgatgttattttggtg
cagaggcaatttggtttagactctgttaatgcttctcctaggaaagatcttgtcaggcat
ttgtctctgaaagagaaatatccactctctttcaattctgataaggatgagtttggaagt
cagaccaagagtgagaaggttgtagagagatggatggtgcattatgagagtaggaaaaac
cgggatagtaattctggtagcagaaggtccagtaatagtactgcacacacctacaagaaa
accattttactcttaaggtctttatatgcctttgtgagacttttacctgcctataaggtt
tttcaagatatcagttcatctggtcagattcacccttttactcttgctcatcgcgtgtct
tcctttgttgagcctttcaccaggagggaagaggccgaaatgcagcgctttgtgttcact
cctgtcgacacttcttgtggtagactatgcctctcggtgttataccgttcatccctttct
gacataaactctgaaccatcaactcctatgtctcctcaagttattcctgaatatgttggg
agtccattggcagatccattgaaaaggtttcctacgctccctgtaacgatagcaccatct
catggatctccatcgtcgttgccattctcaagacgtcatagttggagttacgaccgtttt
agaccctccccaccttcagtctccttttcaccttcaccaacacattcagagtctcatgct
ttaatttcaaatccagcctttccccgtttacctccttcaagcttaccttcacaactgcct
gaaatggttataggacataaagataatatgaactacgatgaatattacccttctcctgtc
ttttcccaatcaccctcactgtcaccaccaattcgcattcctgtaaagcgcttgccaaat
ggtctattgcagtctgaaagtgctcctccaagtgcacctattgcaaagcttcctcattcc
cctgcattgtcaagcaaaccgaatttgccgccatcccctccacttaaagcttctggagca
attatttctaggattaatagagatgttggtccattgccggctggctctgcaattggaaag
tcatcttctcttggaagagatgaaagccgaagaatttcaggctggagggtatcatccaat
aactcaccaatttcaagaagctccagtagatcttttccagatgatttagatgatccagag
tttccatgcccctttgatgtggatgaggatgagatgacagatagaggtagcagacctgaa
tccttcgaccaaaaaggaaacctttgcgacatgctggaacctgggggatttttcccactc
cgtaaatctcaagatgctgctgttggcgccctagtacgtatgcttcaaaaagctccacca
cttcgccaagacttcaccaattccactgcagatcttggacaaccccctacacctgattct
ccaagcagaaatatccaactgggaaatcaaatatctgagtcattggcttcaaagagtcgc
tatgctccctcctctagtatcgcagcctcaggtctttttgtgcctaaaactacagctgat
gcattggaagaactacaaagctatagagagatgaaaaatttgttgctaaggcaagctggg
aaaactcatacatga
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