Cucumis melo (muskmelon): 103485406
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Entry
103485406 CDS
T03195
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A isoform X1
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103485406
Membrane trafficking [BR:
cmo04131
]
Protein recycling
Others
EARP complex
103485406
Endosome - Golgi transport
Tethering complex
GARP complex
103485406
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Sec23_trunk
Motif
Other DBs
NCBI-GeneID:
103485406
NCBI-ProteinID:
XP_050937929
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All DBs
Position
3:695460..716763
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AA seq
746 aa
AA seq
DB search
MMISTCRFAVLRCQLYPTRRTNCSKIEHSCSNQRSFPKCFPFFVQIGASLTHLSSVSYQL
TITRIHIHHPDLSPWVSPICCRVCSRSVSGSSHLHSTSWVVTNILSKGVKLREYTKGVEN
NLRQVELDSIQEYIKESDNLVSLHEQIRDCDNILSQMETLLSGFQAEIGSISADIKVLQE
KSMDMGLKLKNRKVAESKLAKFVEEIIVPPRMIDIIVDGEVNDEYLRTLEILSKKLVVAE
VDPMIKNSKALKDVQPELEKLRQKAVSKVYDFLVQKLHALRKPKTNIQILQQSVLLKYKY
VISFLKDHSKEVYSEVRTAYIDTMNKVLSAHFRAYIQALEKLQLDIATSSDLIGVEARSS
GLFLRGREPLKNRSAVFALGDRIKILKEVDEPALIPHIAEASSIKYPYEVLFRSLHKLLM
DTATSEYNFCDDFFGEESMFYDIFAGPFAVIDEHFSSILPNSYDAIGLMLMILIIHQHQL
IMSRRRIPCLDSYLDKVNIALWPRFKMVFDMHLSSLRNANVKTLWEDDVHPHYVMRRYAE
FTASLIHLNVEYGDGQLDLNLERLRMAIDDLLIKLAKTFSKAKSQTVFLINNYDMTISVL
KEAGPEGGKILVHFENLLKSNTALFVAKLLAEHFSQLIKFVKTRGSEDLSSNPDRPITVA
EVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDCIKRIV
GGSALNKDLVSISSIMYEIRKYSRTF
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
atgatgatatccacgtgtagattcgccgttctccggtgccaactctacccaactcgccgt
acgaactgcagcaaaatcgagcattcttgttcaaaccaacgctcttttccaaagtgtttt
ccattttttgtccagattggtgcgtctttgacccatctgtcgtccgtttcatatcagctc
accatcactcgaatccatatccaccatccagatctgtctccatgggtttctccaatatgc
tgccgagtttgctccagatctgtctcggggagttcacacctccattcgacatcatgggtt
gttacaaacatactttctaaaggtgtaaaactaagggagtacacaaagggagttgaaaac
aatttgcggcaggttgagctggattccatacaggaatatattaaagaaagtgataactta
gtctcgcttcatgaacaaattcgcgactgcgataacattttatcacagatggaaactctt
ctcagtggtttccaggccgaaattggttctattagtgcagacattaaagtcctgcaggag
aagtcaatggatatgggtctgaagctcaagaatcgcaaggtggcagaatcaaaattggca
aagtttgtcgaagagatcattgtccctccaaggatgatagacataattgttgatggagag
gttaatgatgaatatttgagaactcttgagattctaagtaagaaactggtggtcgcggaa
gtggatccaatgataaaaaattccaaagcactaaaggatgtacagcctgagcttgaaaaa
ctccgacagaaagccgtgtctaaggtctatgacttccttgtccagaaactccatgctttg
agaaaacctaagacaaatattcagatccttcaacagagtgttcttttgaagtacaagtat
gttatttctttcctcaaggatcatagcaaagaagtttacagtgaggttcggacggcatat
attgatacaatgaacaaggttttgagtgcacattttcgtgcctacatacaggcactagag
aaattacagttagacatagcgacatctagtgatctgattggggttgaggctagaagttca
ggtcttttcttgagaggcagggaaccactgaagaaccgatctgccgtttttgcacttggt
gatagaataaagatattaaaggaagttgacgaacctgcactgattccacatatagctgaa
gccagttcaattaagtatccttacgaagttctctttaggagcttgcataagcttctaatg
gacactgccacttctgagtataatttctgtgatgatttttttggggaagaatctatgttt
tatgacatctttgcgggtccctttgctgtcattgacgaacacttcagttcaattctccca
aacagttatgatgcaattggtctaatgctcatgattttgatcattcatcagcatcagctc
atcatgtcacgacggcgtataccttgcttggattcatatttagacaaggttaatattgct
ctttggcctcgttttaagatggtatttgacatgcacctcagcagtctgaggaatgcaaat
gtaaagacgttgtgggaagatgacgtgcatcctcactatgtcatgagacgatacgctgag
tttacagcttcacttatccatctaaatgtcgaatatggagatggacagcttgatttgaat
ttggagcggctaagaatggcaattgacgatttgcttataaagcttgccaaaaccttttca
aaagctaaatcacagacagtttttcttataaataactatgatatgacaatttccgtcttg
aaggaagctggtccggagggtgggaaaattctggtgcacttcgagaatctgctgaagagc
aacacagccttgtttgtggcaaaactcttggcagagcattttagccaacttatcaagttt
gttaaaacccgtggctcggaggacctaagttcgaatcctgaccgaccaattactgtggct
gaagtagagccccttgtaaaggattttgcgagcagatggaaagctgcaatcgagttgatg
cacaaagatgtcatcacttctttcagtaatttcctgtgtggaatggaaatcctaagggcg
gctttgactcaactgctcctttattacacaagactctcggactgtataaagcggattgtt
ggtggctcagctctaaacaaggatctagtgtccatttcttcaattatgtatgaaattagg
aaatattcaagaactttttaa
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