Cucumis melo (muskmelon): 103485582
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Entry
103485582 CDS
T03195
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04142
Lysosome
cmo04144
Endocytosis
cmo05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103485582
04142 Lysosome
103485582
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103485582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103485582
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmo04147
]
103485582
Membrane trafficking [BR:
cmo04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103485582
Exosome [BR:
cmo04147
]
Exosomal proteins
Proteins found in most exosomes
103485582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
103485582
NCBI-ProteinID:
XP_008441473
UniProt:
A0A1S3B3K2
LinkDB
All DBs
Position
3:3664461..3676894
Genome browser
AA seq
1733 aa
AA seq
DB search
MAAASAPITMKEAITLPSIGINPQFITFTHVTMESDKFICVRETAPQNSVVIIDMNMPMQ
PLRRPITADSALMNPNSRILALKAQVQGSTQDHLQIFNIEQKSKMKSHLMPEQVVFWKWI
TPKTLGLVTQTSVYHWSTDGESEPVKVFERTANLASNQIINYRCDPSEKWLVLIGIAPGS
PERPQLVKGNMQLFSVDQQRSQALEAHAAAFAQFKLPGNENPSTLISFATKTLNAGQITS
KLHVIELGAQPGKPSFTKKQADLFFPPDFADDFPVAMQISHKYSLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAEASSVGGFYAINRRGQVLLATVNEQTIISFVSGQLNNLEL
AVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQ
TGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLGDDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTFPNVADAILANGMFSHYDRPRIAQLCEKAGLYVRALQHYTELPDIKRVIVNTHAI
EPQVCLVCTCPPYHVAGLCIFNLTYGFLQSLVEFFGTLSREWALECMKDLLLVNLRGNLQ
IIVQVAKEYCEQLGVDACIKLFEQFKSYEGLYFFLGSYLSSSEDPDIHFKYIESAAKTGQ
IKEVERVTRESNFYDAEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYI
EGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQ
FLEHLVSEGSQDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVA
YRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWEKVLNPENEYRRQLIDQVVSTALP
ESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRV
MDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNIQSIERAVEFAF
RVEEDAVWSQVAKAQLREGLVSDAIESFIRADDATQFLEVIRAAEDANVYHDLVRYLLMV
REKAKEPKVDSELIYAYAKIDRLAEIEEFILMPNVANLQNVGDRLYDEALYEAAKIIFAF
ISNWAKLAVTLVKLKQFQGAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNIIIQV
DDLEEVSEYYQNRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRHEKLMEHIKLFS
TRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAATTIMNHSPEAWDHMQFKDVAVKVAN
VELYYKAVHFYLQEHPDLINDLLNVLALRVDHTRVVDIMRKAGHLLLVKPYMVAVQSNNV
SAVNEALNGIYVEEEDYDRLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGR
WKQSIALSKKDNLYKDAMETASQSGDRELAEELLVYFIEQGKKECFASCLFVCYDLIRAD
VALELAWINNMVDFAFPYLLQFIREYTGKVDELVKDKIEAAKEVKAKEQEEKDVIAQQNM
YAQLLPLALPAPPMPGMGGGPGMPGFAPGPPQMGGLGMPPMPPFGMPPMGSSY
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccagcgctccgatcaccatgaaggaagccataacgcttccgagcattgga
attaatccgcaattcattacgttcacgcacgtgactatggaatcagataaatttatttgt
gttcgagaaacggcgccgcagaatagtgttgtgattatcgatatgaacatgccaatgcag
ccattgaggaggcctataactgcggactcagcacttatgaatcctaattctagaatattg
gccttgaaagctcaagtccaggggtcaactcaagaccacctacaaatattcaacattgag
cagaagtcaaaaatgaaatcacatttgatgcccgaacaggttgtcttttggaagtggata
acccccaagacattgggcttagttactcaaacttcagtgtatcattggtctactgatggc
gagtctgaacctgtgaaagtgtttgagagaacagccaatctggctagcaatcagattata
aactataggtgtgatccttcggaaaagtggttggttttgattgggattgcacctggttca
cctgagaggccacaacttgtgaagggcaacatgcaactcttctctgtggatcagcagaga
agtcaagctcttgaagcacatgctgcggcatttgctcaatttaaacttcctggaaatgag
aacccttcaactcttatatcctttgccacaaagacacttaatgctggacaaatcacgtcc
aagttacatgtcattgaacttggtgcccagccaggaaaaccatcatttacaaagaagcaa
gcagatctcttttttccacctgattttgctgatgactttcctgtggcaatgcagatatcg
cacaaatatagtttgatctatgtgatcaccaagctggggctgttatttgtatatgactta
gagacagctgctgctgtatatagaaataggatcagcccagatcctatatttttgactgca
gaggcttcttcggtgggaggattttacgctataaataggaggggtcaggtgttactggct
accgtcaatgaacaaacaattatctcctttgtcagtggccagttgaacaatttagagctt
gctgtcaatcttgctaaaagaggaaatcttcctggtgctgagaatctggttgtccagcgt
ttccaagaactttttgctcaaacaaagtacaaagaagctgctgaattggctgctgagtct
cctcaaggaatcctccgcacaccagatactgttgcaaaatttcagagtgtaccggtgcaa
actggtcaaacaccgcctctacttcagtattttggaactttgttaacaagaggaaagctg
aacgcatttgagtcattggagttgtctcgtttagttgttaaccagaataagaagaacctc
ttggagaactggttgggtgatgacaagttggaatgcagcgaggaactaggagatcttgtg
aagactgtggacaacgacctggcgttgaaaatctatataaaagccagagcaacaccgaag
gtagttgctgcctttgctgagcgaagggaatttgacaagatccttatatattcaaagcag
gttggatacacaccggactacttattccttttgcaaacaattctccgaacggatccccag
ggagcagttaacttcgcattgatgatgtcacaaatggaaggaggttgccctgttgactac
aacacgataactgatctttttcttcagaggaatttgattcgtgaggctactgctttcctg
ttagacgttttgaagccaaatctacctgagcatgctttcctccagacaaaggtcctagaa
atcaatctggtaacttttccaaatgtagccgatgccatattggctaatggaatgtttagt
cattacgatagacctcgaatcgcccaactttgtgagaaggctgggctttacgtgcgagct
ttgcagcattatacggagctaccagatattaaacgagtcatcgtgaacacacatgctatc
gaaccacaggtttgtctagtttgcacttgtcccccttatcatgtagctgggttgtgtata
ttcaatcttacatatggttttctgcagtcacttgtagagttttttggtaccttgtctcgt
gagtgggctttggagtgtatgaaggaccttttgcttgtgaatctcagaggcaaccttcag
attattgtgcaggttgcaaaggaatattgtgaacagttgggggttgatgcatgcattaaa
ctttttgaacaatttaagtcatacgagggcttgtactttttcttggggtcatatttgagt
tcgagtgaggatcctgacattcacttcaagtacatcgagtctgctgctaaaacaggacag
attaaggaggttgaacgtgtaacaagagaatcaaacttctatgacgcagagaaaaccaag
aactttttaatggaagctaagcttccggatgctcgtcctttaattaatgtgtgtgacagg
tttggatttgttccagatctcacacattacctttatacaaataacatgctccgctacatt
gaaggatatgttcaaaaggtgaaccccgggaatgctcctctagttgtgggccagctgctg
gatgatgagtgtcctgaagatttcattaaaggtttgattctctctgtccgttccttgctt
cctgtggagcccctagtggatgaatgtgaaaagagaaatcgattgcggttacttactcaa
tttttggagcatctggtgagtgagggaagtcaagatgtacatgtacataatgctctgggt
aaaattattatagatagcaataataatccagaacacttcctcaccaccaatccgtactat
gattctcgtgttgtgggcaaatattgtgaaaaacgtgatcccactttagctgttgtggcc
tatcgacgtggacagtgtgatgatgagcttattaatgttacaaacaaaaattctttgttc
aaactgcaagcaagatatgtggttgagaggatggatggtgatctttgggagaaggttctt
aaccctgaaaatgaatatagaaggcagctcatcgaccaagttgtgtcaacagccttgcca
gaaagcaagagcccggagcaagtttcggctgctgttaaggcttttatgacagcagatctg
ccacatgagttgattgaacttcttgaaaagatcgtcctgcagaactctgcctttagtgga
aactttaatctgcagaatctgcttatattgacagctatcaaggccgatccatccagagtt
atggactacattaacaggctagataattttgatggacctgcagtcggggaagtggctgtg
gaggcacagctgtatgaagaggcatttgccattttcaagaagttcaacttgaatgttcag
gctgtcaatgtcctgttggataacattcaaagtattgaaagagctgtagaatttgcattc
cgggttgaagaagatgcagtttggagccaggtggcaaaggctcaactgagggaaggattg
gtgagcgatgctattgagtcctttattcgtgcagatgatgccactcaatttctggaagtc
attcgtgctgctgaggatgcaaatgtgtatcatgacttagttaggtaccttttgatggtt
agggagaaggccaaagagcccaaggtggacagcgagctgatttatgcctatgctaaaatt
gatcggttggctgagatcgaagagtttattctcatgccaaatgtggctaatcttcaaaac
gttggggatcgcctctatgatgaagccttatatgaggctgctaaaattatatttgccttc
atatctaactgggccaagctggctgtcactcttgtaaaactgaagcagttccaaggcgct
gttgatgctgcaagaaaagctaacagtgcaaagacatggaaggaagtgtgctttgcttgt
gttgatgctgaagaattccgcctggcacaaatttgtggtcttaacattatcatccaggtg
gatgatctggaggaggtcagtgaatattatcagaatagaggatgcttcaatgaattaatt
tctctcatggagagtggactgggacttgaacgtgctcatatgggtatcttcactgagttg
ggagtgttgtatgctagataccgccacgaaaagcttatggaacatatcaaactgttctca
acccggcttaatattcccaagcttatacgagcttgtgatgaacagcaacattggaaggaa
ctcacatatttgtatatccagtacgatgaatttgataatgctgcaactacaatcatgaat
cattctcctgaagcgtgggatcacatgcaatttaaagatgttgcagtcaaagttgctaat
gtggagttatattacaaggctgtacatttttatttgcaagagcatcctgatcttattaat
gatcttctcaatgtgcttgcacttcgtgtagatcacacacgagttgttgatattatgagg
aaggctggtcacttgctgcttgtgaagccatacatggttgcagttcagagcaacaacgtg
tctgctgtgaatgaggccttgaatggaatttatgttgaagaggaagactatgatagactg
cgtgaatcgattgatttgcacgacaattttgatcaaataggccttgcacagaagattgag
aagcatgagctacttgaaatgagacgggttgcagcctacatctacaagaaagccggaaga
tggaagcaatccattgccttgtcaaagaaagacaatctctacaaagatgcaatggagaca
gcatcacaatctggtgaccgtgaacttgctgaggagttgcttgtttacttcattgaacag
ggaaagaaggaatgttttgcttcatgcctctttgtttgttatgacttaatccgggctgac
gttgctcttgaacttgcctggatcaacaacatggtcgactttgctttcccatacctgttg
cagtttatccgagaatatacaggaaaggttgatgaactagtgaaggacaagattgaagct
gcaaaagaagtgaaggctaaagagcaggaagagaaggacgttattgctcagcagaacatg
tatgctcagttgctgcctcttgctctgcctgcaccgcctatgccgggtatgggaggagga
ccaggaatgccagggtttgctcctggaccaccacaaatgggtggattggggatgcctcca
atgccacctttcggcatgccaccaatgggtagcagctattaa
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integrated database retrieval system
