Cucumis melo (muskmelon): 103485842
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Entry
103485842 CDS
T03195
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmo03000
]
103485842
03036 Chromosome and associated proteins [BR:
cmo03036
]
103485842
Transcription factors [BR:
cmo03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
103485842
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103485842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_34
ADD_ATRX
Lsr2
Lyase_aromatic
Motif
Other DBs
NCBI-GeneID:
103485842
NCBI-ProteinID:
XP_008441780
UniProt:
A0A1S3B4Z9
LinkDB
All DBs
Position
5:complement(17570387..17643849)
Genome browser
AA seq
1490 aa
AA seq
DB search
MEEKHEDVDDVGSASGDSFIDDSEDDGPSTSGKDDQLHLEEPLTEQEIEDLVAEFLEVES
KVSYYSLLQEAQEALEKESLAKVEKEVREELALTLNGDDLETAIANEMATFVEEWEIVLD
ELEIESAHLLEQLDGAGIELPSLYKLIESQASNGCFTEAWKKRIHWVGSQVTGDLLASVS
DAEKTLQIERPVRRRHGKLLEEGASGYLQKKFSTNQIEGIGTEKLEVDWSSLNKVFSEGS
KDSDMLFGSKNWASVYLASTPQQAAEMGLEFPGVDEVEEIDDVDGSSCDPFVAAAIENEK
ELDLSEEQKKKFRKVKEEDDAIFDRKLQIHLKQKRYQKRCKQVSQKDVSPRDEEQPVSLV
HCLNPVSDDKVDGCGMGLSDDENGDVKIKVDIPNGSDASSDIDMERSMEHTASVLPSTSS
NFVEPLGSKRLNDMEEFTTQTKKSRTNGVHNDESSPMEEHSALLNTICNTEKNDYGADSH
PSACPNEKIHCTACDQVVIKVYAHPFLRVIVCADCKSMMDDKKNVKEPDCSECYCGWCGH
NADLVSCKSCKTLFCTGCIRRNLGVECLLKAQASGWHCCCCRPSLLLPLTTQLEEALGSE
ESTGSSSDSDSDNPNADINVTISSKRKRKKKIRRILDDTELGEDTKKKIAIEKERQERLK
SLQVQFSSNSKIMSSAGFCGNLSEGASVEVLGDASTGYIVNVVREKGEEAVRIPPSISSK
LKTHQISGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSADLG
LRTALIVTPVNVLHNWRQEFFKWKPSELKPLRIFMLEDVPRERRAVLLAKWRAKGGVFLI
GYSAFRNLSLGKHVKDRHMAREICYILQDGPDILVCDEAHMIKNTKADITQALKQVKCQR
RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTLDDVKIMNQ
RSHILYEQLKGFVQRMDMTVVKKDLPPKTVFVISVKLSPLQRKLYKRFLDVHGFNNGKDS
SEQLRKRSFFAGYQALAQIWNHPGILQLTKEDKYYVKREDAIENFLAGDSSSDENIDSNI
GIGDKPVNANGNHQDKFVSGFFVKDWSNGLLHANSYKEVDYGGKMVLLLEILTMCSELGD
KALVFSQSIPTLDLIEFYLSRLPRRGKRGKFWKKGKDWYRLDGRTESSERQKIVERFNEP
LNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRF
LAHGTMEEKIYKRQVTKEGLAARVVDRQQVYRTISREEMLHLFEFGDDESLEASTELDQG
NGHTSHQIMTGHQGNVLKQKGPLSHGNCSSDKLMETLLGKHHPRWVANYHEHETLLQENE
EEKLSKEEQDMAWEVYRKSLEWEEVQKVSPGDFISEQKLTTSNNAHPAPETIDLAQSRAR
NRFVSRKCTNLSHLLTLRSQGTKVGCSTVCGECAQEISWEDLNRDAKLGK
NT seq
4473 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaagcacgaggacgtggatgatgttggaagcgcgtccggtgattcttttatc
gatgattctgaagacgatgggccatcaacttctgggaaggacgatcagttgcatctcgag
gaaccattgactgaacaagagattgaggatttggtggctgagttcttggaagttgagagt
aaggtgtcatactactctttgcttcaagaggctcaagaagcacttgaaaaggagtctctt
gccaaagtggagaaagaagttcgagaagaacttgcattgactcttaatggtgatgatttg
gaaacagccattgcaaatgaaatggctactttcgtagaggagtgggagattgtgctcgat
gagcttgagattgagagtgctcatttgttggagcaacttgatggtgctggtattgagctg
ccaagtctctacaagctaattgaaagtcaagcttcgaatggttgctttactgaagcttgg
aaaaagaggatacactgggtagggtctcaggtaactggtgatcttcttgcatctgtatct
gacgcagagaagaccctccaaatcgaaaggcctgtaaggagacgacatgggaaactgttg
gaggagggagcaagtggatatctgcagaagaaattttccactaaccagattgagggaatc
ggaacagaaaaattggaagttgattggagctctcttaataaggttttttcagaaggctca
aaggacagtgacatgttgtttggcagcaagaactgggcttctgtttacttggctagcact
ccgcaacaagctgcagaaatgggactcgaatttcctggagttgatgaggtagaggagata
gatgacgtggatggaagttcttgtgatccatttgttgcagctgccattgaaaatgaaaag
gagttggatctttctgaagaacagaaaaaaaagttcagaaaggtcaaagaagaagatgat
gccatttttgacagaaaactccaaatacatctgaaacaaaagcgatatcagaaaagatgt
aaacaggtctcccaaaaagatgtttccccaagagatgaagagcagcccgtatctctggtt
cactgtttgaaccctgtttcagatgataaagttgatggatgtggaatggggttatctgat
gatgagaatggagatgttaaaatcaaggttgacatacccaacggttctgatgcttcaagt
gatattgacatggaaaggtctatggagcatacagcttctgtgcttccatcgacttcgtct
aatttcgtggaacctttaggttccaagcgtttaaatgatatggaagaatttaccactcaa
actaaaaagagtcgaactaatggtgtacataatgatgaaagttccccaatggaggagcat
tctgctttgttgaataccatatgcaacacggaaaaaaatgactatggtgctgattctcat
ccgtcagcgtgtccgaatgagaagatccattgtactgcttgtgatcaagtggttattaaa
gtgtatgcacatcctttcctgagagtaattgtttgtgcagattgcaaaagcatgatggat
gacaagaagaatgtaaaggaacctgattgctctgaatgctattgcggatggtgtggccac
aatgctgacttagtaagttgtaaatcatgtaaaacactcttctgtactggttgcataagg
aggaaccttggcgtcgagtgcttgctcaaggcccaggcttctgggtggcattgctgttgt
tgtcgcccaagtcttttgctacccttaaccacacagttggaggaagccttaggatctgaa
gagtcgacaggttcaagctctgatagcgattcagacaacccaaatgcagatataaatgta
accatcagctcaaagagaaagcggaagaaaaagatacggcggatacttgatgacactgaa
ttaggagaagatactaaaaagaaaattgccatagagaaggaacgccaagaacgtctaaaa
tcattacaagttcagttttcgtccaattctaaaataatgagctctgctggcttttgtgga
aatctatctgaaggtgccagtgtcgaagtccttggtgatgcctcaacgggatatatagtg
aatgttgtgcgggagaaaggggaagaggccgtcagaattccaccaagcatttcatcgaag
ttgaaaacccatcagatttctggaataagatttatgtgggaaaatatcattcaatcgata
cggaaagtgaagtctggggataaaggacttggatgcattcttgctcatacaatgggtctt
ggtaaaacttttcaggttatagcattcttatacactgcaatgagaagtgcggacttgggt
ttacgaacagcacttattgttacccctgttaatgtgttgcataattggcggcaagaattc
ttcaagtggaagccttcagaattaaagcctcttcgcattttcatgctagaagatgtacca
agggagagaagggccgtgttgcttgctaagtggagagccaagggtggtgtctttttaatt
ggttatagtgctttccgaaatttatcacttggtaaacatgtcaaggacagacacatggct
agagaaatttgctatatcttgcaggatggaccagatattcttgtatgtgacgaggcccac
atgattaagaataccaaggctgatataacacaggcattgaaacaagtgaaatgccagagg
aggattgcgctgactggatcaccgctacagaacaatctcatggagtactattgtatggtt
gattttgtgagagaaggtttcctgggaagtagccatgaatttaggaatcgcttccagaac
cccatagagaatgggcagcatactaattcaactctggatgatgttaaaataatgaaccag
aggtctcatatcctatatgaacagttgaaagggtttgttcaaagaatggacatgaccgtg
gtgaagaaggacttgccacctaaaactgtctttgtgatatctgtaaaactctctccctta
cagaggaagttatacaaaagatttcttgacgtgcatggatttaataatggcaaggattct
agtgaacagttaaggaaacggagcttttttgctgggtaccaagcactggcccagatctgg
aatcatcctggaatcctgcaattgaccaaagaagacaaatattatgtgaagcgtgaagat
gctattgaaaattttcttgcaggcgattcctccagtgatgaaaacatagattctaatatt
ggcattggagataagccagtgaatgccaatgggaatcatcaggataaatttgttagtggc
ttttttgttaaggattggtcaaatggtctgcttcatgcaaatagttacaaggaggtggat
tacggggggaaaatggttttactgctagagatcttgaccatgtgctctgaattgggcgat
aaggcattggtattcagccagagcattcctacgcttgatctaattgaattctatctttca
agattgcctagacgaggaaagagaggaaaattttggaaaaagggtaaagattggtatagg
ctagatggaagaactgagagttccgaaagacagaagattgttgagaggtttaatgagcct
ctaaataagagggtaaaatgtaccctgatatcaactagagctggatcattgggcatcaat
cttcattctgctaaccgtgtcattatagtggatggttcttggaatccaacttatgatctt
caggctatttatcgagcttggagatatggccaaacaaaaccggtgtttgcttaccgattt
ttggcgcatggaacaatggaagaaaaaatttataagcgtcaggtaacgaaggagggactg
gctgctagagttgttgatcgccaacaggtatatcgaactatttctcgggaagaaatgttg
catctttttgaatttggtgatgatgagagtcttgaggcttccactgagttggaccaagga
aatgggcatacatcccaccagattatgactgggcatcaaggaaacgtgctgaagcagaaa
gggcctctttcccatggcaattgttcatccgacaagttaatggaaactttacttgggaaa
caccatccaaggtgggttgccaattaccacgagcacgaaacgctactccaagagaatgaa
gaggagaaactatccaaggaggagcaagatatggcatgggaagtgtacagaaaatcatta
gaatgggaggaagtgcagaaagtttcaccaggagattttatatctgagcaaaagttaacc
acttcaaataatgcccatcctgcaccggagactattgatctggcacagtcaagggccagg
aaccgatttgtttcccgtaaatgcacaaatctttctcatttgctgacactcagaagtcag
gggacaaaggttggttgtagtacagtatgcggggaatgtgcacaggagataagctgggaa
gaccttaacagagatgccaagttagggaagtga
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integrated database retrieval system
