Cucumis melo (muskmelon): 103485906
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Entry
103485906 CDS
T03195
Name
(RefSeq) sister chromatid cohesion 1 protein 4 isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103485906
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
103485906
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CENP-B_dimeris
CNDH2_N
Motif
Other DBs
NCBI-GeneID:
103485906
NCBI-ProteinID:
XP_008441908
UniProt:
A0A1S3B551
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Position
5:20237686..20250259
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AA seq
1177 aa
AA seq
DB search
MFYSQFILAKKGPLGTIWIAAHLERKLRKNQVADTDIGVSVDSILFPDVPIALRLSSHLL
LGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAVDLPPEESTAPYHSITLPETFDLDDFE
LPDNEIYQGNYVDHHVSSREQITLQDTMEGVVYTTSQFGLDERFGDGDASQIGLDLEEEL
FVEKITVKDHDNISDNDPPTPSQSTFLKDKDEDMEEHVETFATVQDPSSTVRQVHECNLS
SIQDCDVSLKMEDHGTDLEAIGIENNESRKSDIYRGTTDDLDWSSHNDLDYETTRSMQPE
ENGHLSSDPENKDGKLEQFSLPTDEAMEKIKGDALGGPSTGEELNNGVVINNEPEMTFLD
HVDAEYDRSQSTLDATMMSPSRSGVTPDMEDLGHKAPSDAMHATASEGGLIGDQLSSNPT
DNLVEVLSPEKVAPDRTYQEESPGRPEVIDAESKEFQEPKDTEAQNSFNGEEITSMEKSV
LQPCNSHAMEPDRSSLEGESYQGTDAVTQNLESSEKAGTEVSEDGQAGFRDSDKPLDCAL
SNDICTEISNRSPTSDFPAPEKFLSVPEGLTEMHVDNLPLDSSLDKGNLIEDDGGVSGTN
LISGKKRSFTESTLTAQSLNSAESVGVHPSKKVTESIPDDDDLLSSILVGRRSSVLKLKP
SPPVHETISLKRPRSALRVGTSKKKVLMDDVMVLHGDTIRQQLTNTEDIRRVRKKAPCTR
SEISMIQRQFLEDEIFSESIYSGISKELFSLHVEAFDLSEIRVYEKGPFSASTEAGNDIE
SAVRPNTTEESATETNPEAVVDKNDLESQPAEAAVQNETELAQDLTLECPDLDVQDQQQV
TSTKNAGLEPMGEMEKIDSEAGNVGGAVNSFDIPELELPSLAIGDKYDDPNASLQMDICF
SSEKILESQPGVEDTLTVETGNVGLDSVNTNNCTEIRDNVDDEKSDHNVSLVTSPRENGE
SNYLTPENCDKPVKLGEIDVDGVNTTDFVCDEKDAASLCLIDGAQVDSHFSSGFDMDFKS
TSFNEVVNPEYPEEVDLLNIVDTELNILDHPMEDRGDFEDATVANDIEFLNEDDDDEEDE
DNMQFGGDPSFLENSGWSSRTRAVARYLQNLFDRDTVHGRKVLHMDSLLVNKTRKEASRM
FFETLVLKTKDYLHVEQERPFDNISIKPRINLMKSSF
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgttctattctcaattcatattggccaagaaagggccgcttgggacaatatggatagcg
gcacatttggagaggaagctgcggaaaaatcaagtggcggacactgatatcggggtctca
gttgattcaattcttttccctgatgtgccaattgcattgcgattgtccagccatcttctt
cttggggtggtgaggatatattctagaaaggtgaattacctatttgacgattgtagcgaa
gctttgcttaagataaagcaggcattccgttctactgctgttgatttaccccctgaagaa
tctactgctccatatcattctatcactttgcccgagacttttgatcttgatgattttgag
cttccagacaatgaaatttatcaaggtaattatgttgatcatcacgttagttctcgagag
caaattacacttcaagatactatggagggtgtagtctacaccacttctcaatttggcttg
gatgagcgatttggtgatggtgatgcttcacaaattggtttagatcttgaagaggaactc
tttgtggagaagatcactgttaaggaccatgataatatttcagataatgatcctccaacg
ccttctcaatcaaccttcttgaaagacaaggatgaagatatggaggaacatgtagaaact
tttgcaacagtgcaggatccatcatctactgtgagacaagtgcatgaatgcaacttgtca
agcatacaggattgtgacgtttctttgaaaatggaagatcatggtacagacctggaagcc
attggaattgaaaataatgaatccaggaaatcagatatttatcgtggtactactgacgat
ttggattggtcttcccataatgatttggattatgagactacaagaagcatgcagcctgaa
gagaatggccatctttctagtgacccagaaaacaaagatggaaaacttgaacagttttct
ttgccaactgatgaggcaatggaaaagatcaaaggagatgcattgggtggcccaagcaca
ggggaagaattgaacaatggagttgtaataaacaatgagcctgaaatgacctttcttgat
cacgttgatgcagaatatgaccgcagccaatctacattagatgcaactatgatgtctcct
agccggtccggtgtcacacctgatatggaggacttgggtcataaagctccttcagatgcc
atgcatgcaacagcatcagaaggtggtttgattggtgatcaactatcctcaaatcccacg
gacaacttggttgaagtgctctcacctgaaaaagttgctccagatagaacgtaccaagaa
gaatctcctggtaggcctgaggttattgatgctgaatctaaggaatttcaggagccaaaa
gacactgaggctcagaattctttcaatggtgaggaaattacatccatggagaagtctgtg
cttcagccatgcaattcccatgcaatggaacctgataggtcatctcttgaaggtgaaagc
taccagggaaccgatgctgttacccaaaatttggaatcaagtgagaaagctggtacagaa
gtttctgaagacggacaagctggtttcagggattctgacaaacctttggattgtgcatta
tctaatgatatttgcacagagatttctaataggtctcccacctcggacttccctgcacct
gagaagtttctttctgtaccagagggccttaccgaaatgcatgttgacaacttaccattg
gattcttcattggacaaaggaaatttaattgaagatgatggaggtgtttctggaactaat
cttatatcgggaaagaagcgaagctttactgaaagtactttaacagcccagagtttgaac
tcagctgagtcagttggggtgcatccttctaaaaaggttacagaatccattcctgatgat
gatgatttgttatcatctattttagttggaagaagatcttcagttttgaaactgaaaccg
tcacctcctgtgcacgagacaatatccctgaaacgcccaagatctgcacttcgagttggc
acctcaaagaagaaggtgcttatggatgatgtgatggttttgcatggagacacaatacgt
caacaacttacaaacactgaagacatacgtcgtgttcggaaaaaggcaccttgtactcgt
tctgaaatttcaatgattcagagacaattcttagaagatgaaattttcagtgaatccata
tattcaggcatctccaaggagctgttctcattgcatgtagaagcatttgaccttagtgaa
atcagggtttatgagaagggtccattcagtgcttctactgaggcaggaaacgatattgag
tctgctgtcaggccaaacaccactgaagaaagtgctacagaaacaaaccctgaagcagtg
gttgacaaaaatgatctcgaatctcagcctgctgaggctgctgttcagaatgaaactgag
ttagcccaagacttaacattggagtgtcctgatcttgatgttcaagatcagcagcaagtg
acttcaaccaagaatgctggactggaacccatgggagagatggaaaaaatagattctgaa
gcgggaaatgttggtggtgcagtcaatagctttgacattccggagttagagttgccatcc
ttagccattggggataaatatgatgatccaaatgcttctttgcagatggatatttgtttt
tcttcagagaaaattttggaatcgcagcctggtgttgaagatactcttacagtggagaca
gggaatgtaggtcttgacagtgttaatactaataattgcactgaaatcagagataatgtt
gacgatgaaaaatctgatcacaatgtttcccttgtaacctcacctcgagaaaatggtgaa
tccaattatctgacacccgaaaattgtgacaaacctgttaagttaggggaaattgatgtg
gatggagtaaatacgacagactttgtttgtgatgaaaaggatgcggcttctctttgttta
attgatggagctcaggtggattctcacttttcatcgggatttgatatggattttaaaagt
acctccttcaatgaagttgtaaatccggagtatcctgaagaagttgatttgctcaatatt
gtggacacagaattgaatattcttgaccatcctatggaagaccgtggtgacttcgaggat
gctacagtggcgaatgatatagaatttttgaatgaagatgatgacgatgaagaagacgag
gacaacatgcaatttggtggagatcctagctttcttgaaaacagtggatggtcttcccgc
accagggctgttgccagatatcttcaaaatctctttgatagggacactgtacatgggaga
aaggttcttcacatggatagtttactcgttaacaaaactcggaaggaagcatcaagaatg
ttttttgagacattggttctcaagacaaaggattacctccatgtagaacaggaaagaccc
tttgacaacattagtataaagccaagaataaacctcatgaagtcaagtttctga
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