Cucumis melo (muskmelon): 103486077
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Entry
103486077 CDS
T03195
Name
(RefSeq) GTPase LSG1-2-like
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103486077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmo03009
]
103486077
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
Pre-60S particles
GTPases
103486077
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
Nre_N
Dynamin_N
AIG1
Motif
Other DBs
NCBI-GeneID:
103486077
NCBI-ProteinID:
XP_008442123
UniProt:
A0A1S3B5Q9
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Position
8:22139486..22151797
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AA seq
586 aa
AA seq
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MGKNDKMGLGRALVKQHNQMIQQSKEKGRFYKSQQKKVLESVTEVSDIDAVIQQADEAER
LFSINNPTPNFLINLDGSSSISEMTPAERREQQKIEEALHASSLRVPRRPPWNSKMSAEE
LDDNERQSFLIWRRSLARLEENENLVLTPFEKNLDIWRQLWRVVERCDLLVMVVDARDPL
FYRCPDLEAYAREVDQHKRTMLLVNKADLLSYSVRKKWAEFFSQHEILYLFWSAKAASAA
LDGKKLSTQWNTNEPQNGVDDPDMKIYARDELLARLQYEAEQIVERRTSSTNSTSRSDNL
SVGGKMNEKSPGSVMVGFVGYPNVGKSSTINALVGQKRAGVTSTPGKTKHFQTLIISDKL
TLCDCPGLVFPSFSSSRYEMIAYGVLPIDRMTEHREAIQVVANRVPRHVIEDVYKIKLPK
PKPYEPQSQPPLASELLKAYCVSRGYVASSGLPDETRASRQILKDYVDGKIPHHELPPGI
SNEDHIQEEDAETQKLSATMHDSDSDDGEKGHGVEQVADYLDSFDLANGLAKPNISEKKA
KASSHKRHKKPERKKDRSWRMGNDGGDGMPAVRVLQKPINSGPLKG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaacgacaagatggggctaggtcgggctcttgtgaagcaacataaccaaatg
atccagcagtctaaggagaaaggtagattctacaaatctcagcagaagaaggttttggag
tcggtcactgaggtcagtgacattgatgctgttatccaacaagcagatgaggccgagcgc
ctcttctctatcaataaccctactcccaactttcttatcaacttggatggaagttcgagt
attagtgaaatgactcctgcagaaagaagagagcagcaaaaaatagaggaggctttgcac
gccagcagtctacgagttccacgtaggcccccctggaattcaaagatgtctgcagaggag
cttgatgataatgagagacaatctttcttaatatggcgtcgaagccttgcgaggcttgag
gagaatgaaaatcttgttcttactccatttgagaaaaacctagatatttggagacagctt
tggcgggttgtcgagcgatgtgatttgcttgtgatggttgttgatgctcgagaccctttg
ttctaccgctgccctgacctggaggcatatgcaagagaagttgatcaacataaaaggaca
atgcttcttgtgaacaaggcagatctgctgtcttattcagtcaggaagaaatgggcagaa
tttttcagtcagcacgaaatattatatctgttttggtcagctaaagctgcctctgccgct
ctggatgggaaaaaacttagcacccagtggaacaccaatgaaccccagaatggtgtggat
gatcctgatatgaaaatatatgctcgagacgagcttctggctcgtttgcagtatgaggct
gagcagattgttgaaaggagaacatcaagcactaactctacaagccgatcagataatctt
tctgtaggaggaaaaatgaatgaaaaatcaccaggtagcgtcatggtgggattcgttggg
tatccaaatgttggaaagagctcgacaattaatgctttagttggccagaaacgggcagga
gtcacctctactcctgggaagacaaagcacttccaaacattgattatttccgacaagctt
acactatgtgattgccctggtttagtttttccttcattttcaagctcaagatacgaaatg
attgcttatggagtattgcctattgatcgaatgacggagcacagggaggctattcaagtc
gttgccaatcgagtcccaaggcatgtgattgaggatgtgtacaagattaaattgccgaaa
ccaaaaccttatgagccacaatctcaaccacccctagcatcagaacttttgaaagcatat
tgcgtctcccgaggttatgttgcatctagtggattgccggacgaaactagagcttcccgc
caaattttgaaggattacgttgatggaaagattccccaccatgaattgcccccaggaata
tccaatgaggatcatattcaggaagaagatgctgagactcaaaagctctccgctacaatg
cacgattcagactcggatgatggtgaaaaaggccacggtgttgaacaggtggctgattat
cttgattcatttgatctagctaatggacttgccaagccaaacattagcgaaaagaaggct
aaggcatcttctcataaacgccacaagaagccagagagaaaaaaggatcgatcgtggcgg
atgggaaacgatggtggggatgggatgcctgcagtgagagtgttgcagaagccaataaac
tcaggccccttgaaaggttag
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