Cucumis melo (muskmelon): 103486130
Help
Entry
103486130 CDS
T03195
Name
(RefSeq) rRNA biogenesis protein RRP5
KO
K14792
rRNA biogenesis protein RRP5
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmo03009
]
103486130
Ribosome biogenesis [BR:
cmo03009
]
Eukaryotic type
90S particles
Other 90S particles
103486130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
OB_RRP5_4th
OB_RRP5
Spt6_S1
HAT_PRP39_C
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
NRDE-2
Motif
Other DBs
NCBI-GeneID:
103486130
NCBI-ProteinID:
XP_008442208
UniProt:
A0A1S3B5U4
A0A9I9CV33
LinkDB
All DBs
Position
8:complement(19787119..19828328)
Genome browser
AA seq
1918 aa
AA seq
DB search
MAPPSRKSQDGSKNKHSKKPFKSKKKTSETAKPETVSLQIEDDVPDFPRGGGGYISQNKG
EKVRAQGDKEFQNDDLQMTKKRGKKRRKHPSNGDDLESLLNNGVVGNLPKYANKITLKNI
NPRMKFWGVVAEVNKKDLVISLPGGLRGLVSAADAFDPILQNEIEDTEHDLLPVMFHVGQ
LVPCVVLQVDDDKKESGKRKIWLSLRLSILYKDFTLDLLQEGMVLTSYVKSIEDHGYILH
FGLTSFTGFLPKTKQSDQSGNEVHVGQLLQCVVRSIDKTRKVVYFSSDQDIVSSSVAKDL
KGISIDLLIPGMMVSARVQSTLENGILLSFLTYFNGTVDMFHLQNSFHSSNWKDSYNQNM
KMNARILFIDPSTRAVGLTLIPHLVRNKAAPPHVRIGDIYDSAKVVRVDRGSGLLLEVAS
SPESTPTFVSVSDMAEEVVKKIGKKFKEGSRVRVRILGFRHLEGFAIGTLKASAFEGPVF
SYSDVKPGTLIRAKVIVVDDFGAIVQFPGGLKALCPLSHMSEFEIAKPRKKFKVGAELIF
RVLGCKSKRITVTHKKTLVKSKLEVLSSYADATAGLVTHGWITKIEKHGCFVRFYNGVQG
FAPRFELGIEPGSDPSSTYHIGQVIKCRITSSTPSSKRISLSFVMKPARVSEDTKVDLGC
IVTGVVDEITETHVTLYINRTGYSRGRISTEHLSDHQAHASLMKAVLKPGYQFDQLLVLD
IEGESLILSAKQSLIKLAHMLPSDSSHVHPDSIIHGFICNIIEVGCFVRFLGRLTGFSPR
NKAMEDQKLDLREAYYIGQSVRSKIVDVSGETGRITLSLKQSTCFSTDASFIQEFFSTEE
KIAKLQSLDESNWAEGFAIGSVVEGEVQEVKDIGVTISFEKYHDVFGFIALHGLSGSTVE
TGSTIQAAVLDVSKTERLVDLSLKPELVGKWMGKSSSRQTNRKKRMAEALTHLEMNQAVH
TVVEAVKENYLVLSLPEFGYAIGYASMYDYNTQRIHQKQFTVGQSVVATVVALPCPSTFG
RLLLLLKSISETIVTPGSKRSRKNSSCEVGSLVHAEIIDVQPLEMRLKFGVGLRGRIHVT
EVSNTPDEASEAPFSNFRVGQTVVARVVDHSANKGKGYLWELSVKPEVLKDFSGVGGEIV
NEDLGFSIGQRVTAYVSNVNGDWAWLAVTRQVTAQLFILDSSSEPIELQEFSKRFYVGRA
VSGYISNIIGEKKILRLVLHHLSAIPSGKSDQENLKISNLPTDVCKKIICHLNEGDIVGG
RISKILPGVGGLLVQIGPHLFGRVHYTELTDHLVPDPLCGYKEGQFVKCKVIEITHAVKG
TTHIDLSLRSSAGILCQKNVECNNHENIASGRVKIEDIHSHMEVQGYVKNVSPKGCFILL
SRGLEAKILLSNLSDGYIDNPEKEFPTGKLVRGRILSVEPLSKRVEVTLKSVTETGGLRE
SNNDLRSFSAGDIISGRIKRVESFGLFISIDNTDVVGLCHISEVSDNSIENLDFRYHAGD
TVKAKVLKVDEKRHRIALGMKRSYIGERSELCTNMEEEHEDAADGDSFIGEARLSMDPDS
SSTKFKDMDDDFNNVEPEQPLRLAESRALVPSLEVTLDDIDETDMVTLQSENKELTSGKD
SKEKNDRREKKKAKEEREKEVRAAEERLLQNSSPTTVDEFEKLVRSSPNSSFVWIKYMDF
FKADAEKARSIAERALRTINIREENEKLNVWLAYFNLENEYGNPKEDAVTKIFQRALQCN
DPKKVHLALLGMYERTKQDKLADELLDKMIKRFKHSCKVWLRRMENLLKKKQDEIQSIVN
RALLCLPKRKHIKFISQTAILEFKCGVADRGRSMFEGILREYPKRTDLWSIYLDQEIRLG
DKDMIRALFERATSLSLAPKKMKFLFKKYLEFEKSAGDEERIESVKQKALEYVENTLA
NT seq
5757 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgccttcaagaaaatcacaggatggctcaaagaacaagcattccaaaaagcca
ttcaagtcgaagaagaaaacgagtgaaacagctaaacccgaaacggtatcgctgcagatt
gaagatgacgttcctgacttccctagagggggaggaggttatataagccaaaacaaaggg
gaaaaagtacgtgcccaaggagataaggagtttcagaatgatgatctgcagatgacaaaa
aaaaggggaaagaagagaagaaagcatccgtcaaatggggatgatttggaatccttgttg
aacaatggtgtggtgggaaaccttcctaaatatgcaaataaaattactttaaagaatata
aatccaagaatgaaattttggggagttgttgccgaagttaataagaaggatcttgttatt
agtctaccagggggcctacgcggattagtgtccgctgctgatgcttttgatccaattttg
caaaatgaaattgaggatacagagcatgatttacttcctgtcatgttccatgttgggcaa
ctggttccatgtgttgtgctacaagttgatgatgacaagaaagaatcggggaagagaaag
atttggctttctttacgcttgtctatattgtacaaagatttcacattggatcttcttcaa
gaaggaatggttctgacatcatatgtgaaaagcattgaagatcatggctacatccttcat
tttggtttgacttccttcactgggtttttgccaaagaccaagcaatctgatcaatctggg
aatgaagtgcatgttggacaacttcttcaatgtgttgttagaagcattgacaaaactcgc
aaagtggtttattttagttctgatcaagatattgtgtccagcagtgtggcgaaggatctg
aaaggtatttcaattgaccttctcatccctggcatgatggttagcgcacgagtacaatca
acccttgaaaatgggatcttgctatcctttctcacttattttaatggaactgttgatatg
tttcacttgcaaaatagttttcattcttcaaattggaaagattcttacaaccagaacatg
aagatgaatgctcggatattatttatcgatccttcaactagagctgtggggttgacattg
attccacatctcgttcgtaacaaggctgcacctccacatgtgagaattggtgatatctat
gattctgcaaaagttgttagggttgatagaggttccggcttgcttcttgaagtagcttct
tctccggagtcaactccaacatttgttagtgtatcggatatggctgaagaggtcgtgaaa
aagatcggaaagaagtttaaagaggggagtcgtgttcgtgttcgtatacttggctttaga
catttggaaggatttgcaattgggactttgaaggccagtgcctttgaaggtccagtgttt
tcctactcagatgtgaagcctgggacgttgatacgtgctaaagttatagttgtcgatgat
tttggtgctattgtgcaatttcctggtggtcttaaagctctgtgtccccttagtcacatg
tctgagtttgaaattgctaagcctcgaaaaaaattcaaggttggagctgaattaattttc
cgtgtgcttggttgcaagtccaagagaataactgttacacacaagaagacacttgtaaaa
tcaaaattggaggttcttagttcatatgctgatgctactgcagggttagtgacccatggc
tggataacgaagattgaaaaacatggttgctttgtcaggttttacaatggggttcaaggt
tttgctcctagatttgagctgggaatagaacctggttctgatccaagttcaacgtatcat
attgggcaagttatcaaatgtagaataacaagctctactccctcctccaagcgaattagc
cttagttttgtaatgaagcctgcaagggtttctgaagacacaaaggttgacttgggttgt
attgtaacgggtgtggttgatgaaataactgagacccatgtaacattgtatataaataga
accggttattcaaggggaagaatatccacagaacatctgtcagatcatcaggcgcacgct
tctttgatgaaggccgtgttgaagcctggatatcaatttgatcaactccttgtactagat
attgaaggtgaaagtttaatcctctctgcaaaacaatctctaatcaaattggctcatatg
cttccatctgattcgagccatgtacatccagattctattatccatggattcatttgtaat
ataatagaagtaggttgttttgttcgcttcctaggacgtttaactggcttttctccacga
aataaggctatggaagaccaaaaattggatctacgtgaagcatattacattggacaatct
gttcgcagtaaaatagttgatgttagtggtgaaacaggtagaatcacactttctttgaag
cagtctacttgcttttcaaccgatgcttcctttattcaggaattcttttctacagaagag
aagattgcaaagctccaatcattggatgaatcaaactgggcagaaggatttgcaattggt
agtgtggttgagggagaagttcaagaggtcaaggatattggagttactattagctttgaa
aaataccatgacgtttttggttttattgcactacatggattgagtgggtccacagtggaa
acgggttctaccattcaggctgccgttcttgatgtctctaaaactgaacggcttgttgat
ttatccttaaaacctgaattagttggtaaatggatgggaaaaagttctagccgacaaact
aataggaagaaaaggatggcagaggcattgacgcacttagagatgaatcaggctgtgcat
actgtagtggaagctgtgaaggagaactatctggtcctttcactgccagagtttggttat
gctattggttatgcatcaatgtatgattacaatacccaaaggatccatcagaagcaattt
acagttggacaaagcgtcgttgccacggttgtggctcttccatgtccttcaacttttggg
agactgctactgcttctgaagtcaataagtgaaaccattgttacacctggttcaaaacgg
tctaggaagaactcttcatgtgaagtgggatctctggttcatgcagagatcattgatgtt
caaccccttgaaatgagattgaaatttggagttggattacgtggtcgaattcatgtgaca
gaggttagcaatacgcctgatgaagcttcagaagctccatttagtaactttagggttggg
caaaccgtagttgcaagggttgttgatcattcagctaataaagggaagggctatctatgg
gagttgtctgtaaaacctgaagttcttaaagatttcagtggcgtgggaggtgagattgta
aatgaagatttggggttttcaattggacaacgtgtcactgcttatgtaagcaatgtaaat
ggtgactgggcatggttagctgttactcggcaagtgactgcccaactatttattctcgat
agttcttcagagcctattgagcttcaggagttctccaagcgcttctatgttggaagggct
gtttctggatacatatctaacattattggcgagaaaaaaatcttacggttggttttgcat
catttatctgccatcccgtctggaaaaagtgaccaagaaaatttgaaaattagtaatttg
ccaactgatgtttgcaagaaaattatatgtcatttaaatgaaggagatattgttggggga
agaatatcaaaaatacttccaggcgttggtggactgctcgtgcaaattggtccccatttg
tttggcagggttcactatacagaacttacagatcatttggtgcctgatccattgtgtgga
tataaagaaggacaatttgtcaagtgcaaggttatagaaattacccatgcagtcaaaggt
acaacacacattgatttgtcactgcggtcttcagctggcatcctatgtcagaaaaatgtt
gaatgcaacaaccatgaaaacattgcttctggacgagtgaagatagaagatattcattct
catatggaggtccagggttatgtgaaaaatgtatcgcccaaaggatgcttcattttgcta
tcacggggcttggaggcaaaaattctcctgtctaatctatccgatggatatattgataat
cctgaaaaagagttccccacagggaaacttgttcgtggaaggatattatccgtcgagccc
ttgtcaaagagagttgaagtcaccctgaagtctgtgactgaaactggtggattgagagaa
agtaataacgacttaagaagtttttctgctggagatataatatctggacggattaagcgg
gtggaatcatttggtctattcatcagcattgataatacggatgtggttggcctatgtcat
atatcagaagtttccgacaattctattgagaacctagacttcagataccatgccggggac
acggtgaaagcaaaagtattaaaggtggatgaaaaaaggcatcgtattgctctgggaatg
aagaggtcttacattggagaaagaagtgaactttgtacaaatatggaagaagagcatgaa
gatgcggctgatggtgacagtttcattggtgaggctagattgtcaatggatccagacagc
agttcaaccaagttcaaggatatggatgatgacttcaacaatgttgaaccagaacagcca
cttaggctggcagaatcaagagctttggttccctcacttgaggtcactcttgatgatata
gatgaaactgacatggttactttgcagtctgaaaataaagagctgactagtggcaaagac
tctaaggaaaagaatgatagacgagagaagaaaaaggctaaagaagaaagggaaaaggaa
gtgagggccgctgaggaaagactgttgcagaatagttcaccaactactgttgatgaattt
gaaaaattggttcgaagctctcctaatagtagttttgtttggattaagtatatggatttc
tttaaggcagacgcagagaaagcccgttcaatagctgagagggctttgaggacaatcaat
attcgggaagagaatgaaaagctcaatgtctggttggcttacttcaatcttgaaaatgaa
tatggaaatcctaaagaggatgctgtgactaaaatctttcaacgagcgttgcagtgcaat
gatcccaagaaggttcatttagcattgctgggtatgtatgagagaacgaagcaagataag
ttggctgatgagctcctggacaaaatgataaagaggttcaagcattcctgcaaggtttgg
ttgaggcggatggaaaatttgctaaagaagaaacaagatgaaattcaatcaattgtgaac
cgtgcccttctttgccttccaaagcgtaagcacattaaatttatctcacaaacagctatc
cttgaattcaaatgtggggtggcagatcgaggtcggtcaatgtttgaaggaattcttcga
gagtatccaaagagaactgacttgtggagcatctatcttgatcaagaaattcgtcttggt
gataaagatatgattcgtgccctttttgaaagggcaactagtttatctcttgctcccaag
aagatgaagttcttatttaaaaaatatttggaattcgaaaagtctgctggtgatgaagaa
cgaattgaatcagtgaaacagaaggcattggagtacgtcgagaatacgttagcctaa
DBGET
integrated database retrieval system
