Cucumis melo (muskmelon): 103486259
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Entry
103486259 CDS
T03195
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B isoform X1
KO
K08775
breast cancer 2 susceptibility protein
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03440
Homologous recombination
cmo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103486259
03460 Fanconi anemia pathway
103486259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmo04121
]
103486259
03036 Chromosome and associated proteins [BR:
cmo03036
]
103486259
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103486259
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
103486259
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
103486259
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
103486259
FA (Fanconi anemia) pathway
Downstream FA components
103486259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Indigoidine_A
Motif
Other DBs
NCBI-GeneID:
103486259
NCBI-ProteinID:
XP_008442370
UniProt:
A0A1S3B6B4
LinkDB
All DBs
Position
4:complement(34610012..34616578)
Genome browser
AA seq
1108 aa
AA seq
DB search
MSSWQIFSDSGNNFRWELSGQRLEGKSECERNGSLSRSNSTTSVARLPSMADLLLCSRFM
QNSEDAGAGPSMFRTGLGKSVSVKQSSIDKALSLLSDDNAPDIGQLRNGGNFSNSLFQTG
TGKSVNVSSEGLLRAKTLLGLEEDDTCSNFQNFGQAISPYDVKGGFSESKGVCSMEDMSG
APVSISPLVSNTCFSRSSLENQASPSFRQIELPNKAPKAPPIKFHTAGGRSLSVSSDALQ
RARSLLGDPELGSFLDDGDRVCYKRNMGDATPSNGEHTFQTPSSNKVESTTEHTSKSFVS
PLRSSSRVMQSSFKSKSILGSNLMKKFDAAEEESISRFDDNKSRSTETIGSQPNEPCTIV
ENALENGIRSGIHLADRSFGEPLNDISNIVDSRSRSGRASNNEKRKLWGTSSISPFKRPR
NAKFSTPLNKNASLVTTSLSTSSSNNLSCKRRVSTRYPHQTSRMYIKEYFGRPPSHHDKL
DYLSDEVRSIKAENAEKYKVPDNSGTNCIGVEAFRHMLAECGASLQHVSELWVTNHYKWI
VWKLACYERQSLVKSNRKFLGVSNVLEELKYRYEREVNQGHRSAIKRILEGEAPPSVLLT
LCISAIRSKCKSRAQVCSSMISESNYGEGAKVELTDGWYSIDALLDGPLSKQLLMGKLFV
GQKLRIWGARLCGWIGPVSPLEMPETVNLTLHINGTFRAHWADRLGFCKNAGVPLSFKCI
KSSGGPVPWTLVGVSRKYPVLYKERLSDGASIVRTERMEMKIRQLYEQRRTAIIDGIVSE
FQRGTKSNIYNESDSEEGAKLFKILETAAEPELLMAEMSPEQLTSFASYQAKIEAIRQSD
MEKSIEKALADAGLSGRDVTPFMRVRVVGLTSKSSQRKIHGKEGLITIWNPSEKQQLELV
EGQAYAIGGLVPINCDADILYLQTKGSTTKWQSLSPQSMKCFEPFYNPRKSVLLSNLGEV
PLSSEFDVVAIIVHVGEVFAAAQQKKQWIFVADGYVSEPHSEGISNSLLAISFCSQYADD
ESFVPMNINLTGSTAGFCNLIKRPKDQINHLWVAEATENTSYFLNFDSTDCSHMKNAAVS
AKRWAENSTSIIENLREKILFMIDDRKD
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtggcagattttttccgattccggcaacaatttccgctgggaactttccggt
cagcgtctcgaaggcaaatccgaatgcgaacgaaatggttctctttctcgaagtaacagc
accacctccgtcgcccgtctcccatccatggctgacctcttgctttgctcaaggttcatg
caaaattccgaggatgcaggtgcgggcccttcgatgtttcgaaccggattgggaaaatcg
gtttctgtaaaacagtcttcaatcgataaggctttatctctgctctccgacgataacgct
ccagatataggtcaattgcgtaatggaggtaatttctccaattctctctttcaaacgggc
accgggaaatcggtcaacgtatcttctgaaggtcttctcagagccaagacattgttggga
ctggaagaagatgatacatgttccaattttcaaaacttcggacaagctatcagcccatac
gatgtgaaagggggattttcagaatcaaaaggtgtgtgtagtatggaggacatgagcggt
gcaccagtttcaatctctccattggtctctaatacttgcttttcaagaagttcattagag
aatcaagctagcccgtcgttcagacaaattgaattgcctaataaggctcccaaggctcct
ccaataaagtttcatacagctgggggaagatccttatctgtttcaagcgatgcactacaa
cgtgcaagaagtctccttggtgacccagagttgggaagtttcttggatgatggggacagg
gtttgctataagaggaatatgggagatgcaacaccgtcaaatggggaacatacttttcag
actccttcatccaacaaggtagagtcaactactgaacacacatccaaaagctttgtttcc
ccattaagatcatcttcaagagttatgcaatcttcattcaagtcaaagagtatattaggt
agtaatttgatgaagaaatttgatgcagccgaagaagaaagtattagtaggtttgacgac
aataaatcccgttcaacagaaactataggcagccagcctaatgagccatgtactatagtg
gagaatgctcttgaaaatggaattagatcagggattcatttggctgatcggtcatttggt
gaaccactaaatgacatttcgaatattgttgactcaagaagtagaagtggtagagctagt
aataacgagaagaggaagctttggggtacaagttccatatctccattcaaaaggcctcgg
aatgccaagttttccactcccttgaataagaatgcatcacttgttactacaagcttatca
acttcatcgtcgaataacctcagttgcaaaagaagggtttccactcggtatccacatcaa
acttcaaggatgtacatcaaggagtattttggaagacctccatcacaccatgacaagttg
gattacttgtcagatgaagtcagaagtatcaaagcagaaaatgcagagaaatacaaagtt
cctgacaactctggcacaaattgtattggagtagaagcttttcgtcatatgttagctgag
tgtggagcttccctgcaacatgtttctgaattgtgggtcacaaatcactacaagtggatt
gtttggaaactggcttgctatgagaggcaaagtctggtcaaatcaaatagaaaatttttg
ggagtttccaatgttctggaggaattgaaatataggtacgaaagagaagtgaatcaaggt
caccgttcggcaataaagagaatactggaaggagaagcaccgccatctgtgttgttaact
ttatgtatttcagctattcgctcaaaatgtaaatcaagggcccaagtttgttcatctatg
atcagcgagtctaattatggtgaaggggcaaaagttgaactgactgatggatggtattcc
attgatgctcttttggatgggccactgtcaaagcaacttcttatgggaaaactgtttgtg
ggacagaaacttcggatatggggagcaagattgtgtggttggatcgggcctgtttcacct
cttgagatgccagagactgttaatttgacgttgcatataaatggaacttttagagctcat
tgggcggatagactgggattctgcaaaaatgctggtgtcccattatcctttaagtgcatc
aagagcagtgggggtccagttccttggactttggttggagtctcacggaaataccccgtt
ctttataaggagaggttaagtgatggggcatccatagtaagaactgagaggatggagatg
aagatcaggcaattatatgagcagaggcgcacagctattatagatggtattgtttctgaa
ttccagagaggcacaaagagtaatatctacaatgagagtgatagtgaagaaggggcaaaa
ctctttaagatccttgagacagcggccgaacctgaacttttgatggcagagatgagtcct
gaacagttgacttcttttgcgagctaccaagctaaaatagaggcaatcaggcaatcagac
atggaaaaatcaattgagaaagcactggcagatgctggattaagtggtagagatgtcact
ccatttatgagagttagagtggttggacttacaagcaaaagcagccaaagaaaaattcat
gggaaggagggcttgattacaatctggaatccatcagaaaagcagcaacttgagctggtt
gagggccaggcatatgctattggaggacttgtgccaataaattgtgatgcggatattctt
tacttgcaaacaaaaggatcaaccaccaaatggcagtctttatctccccagtccatgaaa
tgctttgagcccttttataacccccggaaatctgttttgttatcaaatttgggggaagtt
cctctatccagtgaatttgatgttgttgcaattattgtacatgttggggaagtttttgct
gctgctcaacagaagaaacagtggatatttgtggcagatggttatgtatctgagccacat
tcagaaggcatatccaattcgctcctagctattagtttctgctcacagtatgctgatgat
gagtcatttgtgccaatgaacatcaaccttaccggttccaccgcaggtttctgcaatctt
ataaagagaccaaaggatcaaataaatcatctctgggtagcagaagcaacggagaatact
tcgtactttttgaacttcgattctacggattgttctcacatgaagaatgctgcagtttct
gctaaaagatgggcagagaattctacctcaattattgagaatctcagggagaagatttta
tttatgattgatgatcgtaaagactag
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