Cucumis melo (muskmelon): 103486735
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Entry
103486735 CDS
T03195
Name
(RefSeq) pre-mRNA-splicing factor RSE1 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103486735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103486735
03041 Spliceosome [BR:
cmo03041
]
103486735
03036 Chromosome and associated proteins [BR:
cmo03036
]
103486735
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103486735
Spliceosome [BR:
cmo03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
103486735
Complex B
103486735
Complex C
U2 SnRNP specific factors
103486735
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
103486735
TFTC complex
103486735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
103486735
NCBI-ProteinID:
XP_008443005
UniProt:
A0A1S3B741
LinkDB
All DBs
Position
4:complement(31523183..31539060)
Genome browser
AA seq
1376 aa
AA seq
DB search
MAVSEEECSSAKSRSSSSTSSSTYYLAKCVLRGSVVLQVLYGHIRSPSSLDVVFGKETSI
ELVVIGEDGVVQSVCEQAVFGTIKDMAILPWNERFRPSYTQTLGKDLLIVISDSGKLSFL
SFCNKMHRFLPMTHIQLSNPGNSRNQIGRMLASDSSGCFIAASAYENCLALFSTSISAGS
DIVDKRITYPPDSEGDSVAPRSMQKASICGTIWSMCFISKDRGHLTQDNNPILAVLLNRR
GAILNELLLLGWNVREQTIHVVCQFLEDGPLAYEVVEVPQSYGFALLFRVGDALLMDLRD
AHSPCCVYRIGLHFPPNVEQNFIEESYRVQDADDEGLFNVAACALLELRDYDPMCIDSDD
GSLNTNQNHVCSWSWEPGNNRNRRMIFCMDTGDLFMIEMNFDSDGLKVNQSACLYKGQPY
KALLWVEGGYLAALVEMGDGMVLKLENGRLTYANPIQNIAPILDMSVVDKHDEKQDQMFA
CCGMAPEGSLRIIRNGISVENLLRTSPIYQGITSIWTIKMKLSDAYHSYLVLSFVEETRV
LSVGLSFIDVTDSVGFQSDTCTLACGLLDDGLLVQIYQNAVRVCLPTKIAHSEGIELSSP
ACTSWFPDNIGISLGAVGHNVIVVSTSNPCFLFILGVRKVSGYDYQIYEKQYLRLQNELS
CISIPEKHFAKRESNFPMNSVENSIMSALLNEVSCDTIIVIGTHRPSVEILSFVPSIGLT
VLASGTISLMNILGNAVSGCIPQDVRLVLVDRFYILTGLRNGMLLRFEWPHTTMMNSSDI
PHTAVPFLLSCSDSFSKEFHNADILEKHEDEIPSSLQLIAIRRIGITPVFLVPLTDRLDS
DIIALSDRPWLLHSARHSLSYTSISFQPSTHVTPVCSADCPSGLLFVAESSLHLVEMVHT
KRLNVQKFHLGGTPRKVLYHSESKLLLVMRTQLINDTSSSDICCVDPLSGSILSSYKLEI
GETGKSMELVRNGNEQVLVVGTSLSSGPAIMPSGEAESTKGRMIVFCLEHVQNSDTGSMT
FCSKAGLSSLQASPFREIVGYATEQLSSSSLCSSPDDASSDGIKLEETEAWHLRVVYSTS
LPGMVLAICPYLDRYFLASAGNAFYVCGFPSDSFQRVKRFAVGRTRFMITSLTAHVNRIA
VGDCRDGILFFSYQEDAKKLEQIYSDPSQRLVADCTLLDVDTAVVSDRKGSIAILSCSDR
LEDNASPECNLTLNCAYYMGEIAMTLRKGSFSYKLPADDLLRGCAGPGSDFDSSHNTIIA
STLLGSIVIFTPLSRDEYELLEAVQAKLAVHPLTSPILGNDHYEYRSRENPIGVPKILDG
DILTQFLELTSMQQELVLSSSVGPLSAVKPSSKSMPASIPINQVVQLLERIHYALN
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcggtttctgaggaggaatgttcatctgcgaaatcgcgatcttcatcttccacttct
agttccacgtattacttggctaagtgcgtcctcagaggcagtgtcgttctccaggttctt
tacggtcatatacgctctccgagctctctcgatgtcgtctttggcaaggagacatccata
gagttggtggttataggcgaagatggcgttgtacaatctgtatgtgagcaggccgtgttt
ggcactattaaagatatggccatcctaccatggaatgagaggtttcgaccgtcatataca
cagacgctgggcaaggatcttctcattgtaatttccgattctggaaagctttcatttctc
tcattttgcaataaaatgcacaggtttcttcctatgacacatattcaactttccaatcct
ggaaattcaaggaatcagatagggagaatgctggcctcagattcgagtggatgctttatt
gctgctagtgcatatgaaaattgtttggctttattctccacttcaatatctgctggtagt
gacatcgttgataagagaataacttatcctcctgatagtgaaggagattcagttgctcct
cgaagcatgcagaaagccagtatatgtggtaccatatggagtatgtgctttatttcaaaa
gatcgtgggcaccttacacaggacaacaatcctatactagctgttcttcttaataggaga
ggagcgattttgaatgaactgctattattgggatggaatgttagggaacagactatccat
gttgtctgtcaatttttggaagatggacccctggcgtatgaggttgttgaagttcctcaa
tcttatggatttgcacttctatttagggttggtgatgctctcttgatggatcttagagac
gctcacagtccctgttgtgtttatagaattggcttacatttccctcccaacgtggaacaa
aactttattgaagagtcatatagagtacaagatgcagatgacgaaggactatttaatgta
gctgcatgtgcgctgctggaactaagggattatgatcccatgtgcattgacagcgatgat
ggcagtttgaatacaaaccagaatcatgtgtgctcttggagttgggaaccgggcaataat
agaaaccgtaggatgattttctgtatggatacaggagatctcttcatgatagaaatgaat
tttgactctgatggcctgaaagtgaatcagtctgcttgtctttacaaaggtcaaccatac
aaggctcttctgtgggttgaaggtggatatttggctgcattagtggaaatgggagatgga
atggtcctgaaattagaaaatggaagactgacatatgcaaatcccatccagaacattgcc
ccaattttggatatgtcagttgttgacaagcatgatgagaaacaagaccaaatgtttgca
tgctgtggaatggcacctgaagggtctttaaggattattcgaaatggtatcagtgtagaa
aatttgttgaggacgtctccaatttaccaaggtataacgagtatatggaccattaaaatg
aaactaagcgatgcttatcattcatatttggtactgtcatttgttgaagagacccgagtt
ctatcagttggcttgagttttattgatgtcactgattcagttggtttccagtctgacacc
tgtactttggcatgtggtcttttagatgatggtttattggttcaaatatatcaaaatgca
gtaagggtatgtttacccaccaagatcgcccattctgaaggcattgaattatcttctcca
gcatgcacatcttggtttccagataatattggtataagcttgggagcagttggacataat
gtgattgttgtttccacttctaacccttgcttcttatttatccttggagttcgaaaggtt
tctggatatgactatcaaatatatgaaaagcaatacttgagattgcagaatgaattgtca
tgcatttcaattccggaaaaacattttgctaaaagagaatcaaattttcctatgaactca
gttgaaaatagcattatgtctgcccttctgaatgaggtgagttgtgatactattattgtt
ataggcacccataggccttccgtggagattttatcttttgttccctctataggtcttaca
gtccttgcttcaggaactatttcattgatgaatatattagggaatgctgttagtggatgc
attccccaagatgtaagacttgttttagttgacaggttttatattcttacggggctcagg
aatggaatgttgcttcgttttgagtggcctcatactactatgatgaactcatctgatata
cctcacactgctgttccctttttattgtcttgttccgattctttcagcaaggaatttcat
aatgctgatatattggagaagcacgaggatgaaattccttctagtcttcaattgattgct
attcgtcgtatagggatcactcctgtttttctggttcctttgacggataggctggattcg
gatataattgctctaagtgataggccatggttattacatagtgctagacacagtctttca
tatacttccatatcatttcaaccgtcaacacatgtaactcctgtgtgttctgctgactgc
cctagtggactactatttgttgcggaaagcagtctacatttggtagagatggtgcatacc
aagagactgaatgtgcagaaatttcaccttgggggcaccccaaggaaggtcctatatcac
agtgagagcaaattactgcttgtgatgaggactcaattgattaatgatacatcgtcatct
gacatatgctgtgtagaccctcttagtgggtcaattttatcatcttacaagcttgaaatt
ggagagacaggaaaatccatggagttggtgaggaatggaaacgaacaagttctcgtggtt
ggaacaagcttgtcttctggtcctgccataatgcccagtggtgaagctgaaagtaccaag
ggtcggatgattgtcttctgccttgaacacgttcaaaactcagatactggctcaatgact
ttttgttcaaaggcaggattgtcatctctacaagcctcaccatttcgtgaaattgttgga
tatgctacagaacagttatcaagcagtagtctttgtagcagtccagatgatgcaagctct
gatggtataaaacttgaggaaacagaagcatggcacttacgggtggtttattcaacttca
ttgccaggaatggttcttgctatctgcccttatcttgatcgatatttcttggcatctgct
ggtaatgctttttatgtatgtggtttcccaagtgatagtttccaaagagtgaaaaggttt
gcagttgggaggacacgttttatgataacatctcttacggctcatgttaatagaattgct
gtcggcgattgtcgtgatggtattctatttttctcttatcaagaggatgctaaaaagctg
gagcaaatttactctgatccttcacagaggctagttgctgattgtactcttttggatgtt
gacactgctgttgtttcagatcgtaagggaagcattgctatcttatcatgttctgatcgt
ttagaagataatgcaagtccggaatgcaacttaacgctgaactgtgcttattacatgggt
gaaattgctatgaccttgaggaaaggatctttttcatacaaacttccagctgatgatttg
ttgagaggttgtgctggccctggctctgattttgactcatcacacaacactattattgcc
agtacactattagggagcattgtaatcttcactcctttatcgagggatgagtacgaactt
ttggaagctgtccaggctaaacttgcagttcatccactaacttccccaattttggggaat
gatcattatgagtatcgtagccgtgaaaatcctattggagtaccaaagatacttgatggt
gatatcctaactcagttcttggaacttacaagcatgcaacaagagttggtattatcgtca
tctgttggcccactaagtgcagttaaaccgagctcaaagtcgatgccggcatctatcccc
atcaatcaggttgtgcagctgcttgaaagaattcactatgcactcaattag
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integrated database retrieval system
