Cucumis melo (muskmelon): 103486773
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Entry
103486773 CDS
T03195
Name
(RefSeq) protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 isoform X1
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103486773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103486773
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
103486773
SWR1 complex
103486773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
Myb_DNA-bind_6
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
103486773
NCBI-ProteinID:
XP_016899687
UniProt:
A0A1S4DUM1
LinkDB
All DBs
Position
4:31227828..31243253
Genome browser
AA seq
2117 aa
AA seq
DB search
MTSKGPRSKLDHESRAKRQKALEASREPSRPKTHWDHVLEEMVWLSKDFESERKWKLAQA
KRVALRASKGMVDQATREERKLKEEEQRLRKLALNISKDVKKFWMKIEKLVLYKHQIELD
EKKKKALDKHLEFLLGQTERYSTMLAENLVETYKPSQVNSTNEPHNFHVQEIDESKAVEP
TELNVEHESDSVEFDEEFDVHSEDESEDNEQTIDEDEALITKEERQEELEALQNEVDLPL
EELLKRYSGEKDDLEVTPETSTGGAEETEVEDHGKGNECSTSRKVHEIGSLTFTGRRCNE
SNGESSKIENRTKRETRETKNLSTLPMAFPKDNVFYDFTEEREDGDYDFTGGEDKDDETT
LSEEEKLDKVDSNNGKDEILMLQNESEIPIEELLARYGKDHYNDYDSDFDTEDTSASSDD
LTDSPSHEEIEPMGLDVSVDKNIEPGKSHSSASSPPEGKGSLKSFEVRENKDETFDAARS
VQPPGNTFSTTTVRSKSPGLDSPSHEGIEPVRLDFCVDDNIDPSKSHSASSPPEMKGSFE
NSGERESEDRIFDAAAAARSAQPTGNTFSTTKVRTKFPFLLKHSLREYQHIGLDWLVTMY
EKRLNGILADEMGLGKTIMTIALLAHLACEKGIWGPHLIVVPTSVMLNWETEFLKWCPAF
KILTYFGSAKERKVKRQGWMKPNSFHVCITTYRLVIQDSKVFKRKKWKYLILDEAHLIKN
WKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWSLMHFLMPHIFQSHQEFKDWFCNPISG
MVEGQEKVNKEVLDRLHNVLRPFILRRLKRDVEKQLPKKYEHVINCRLSRRQRQLYEDYI
ASSETQATLASGNFFSMINVIMQLRKVCNHPDLFEGRPIISSFDMAGIVMQLSSSVCSAL
SPGLFSRVDLKGLGFLFTHLDFSMTSWEGDEVRAIATPSSLIKGSTNVNKSEEIGSGFRY
RKRLHGSSIFADIQNAIMEERVRQAMERAEAMAWWNSLRCDKKPIYSTSLRALVTIRHPV
YDICHEKSDPSSYCYSSKISDIVLSPVERFQMMMGLVESFTFAIPAARAPAPLCWYSRSR
SDVFLDPSYEQNCSRFLFPLLTPIRSAIIRRQVYFPDRRLIQFDCGKLQELAILLRKLKS
EGHRALIFTQMTKMLDILEAFINLYGYTYMRLDGSTQPEERQTLMQRFNTNPKIFLFILS
TRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENIL
KKANQKRALDNLVIQSGSYNTEFFQKLDPMELFSGHRSLAIKNMQKEKNHCTNANEVSVS
NADVEAALKIVEDEADYMALKKVEEEEAVDNQEFTEEVIGRMEDDEFMNDDEMKLDEGGD
QISGMIISNKDNEAIIHGANDLNEERAVIVASKEDDVDMLADVKQMAAAAAATGQTISSI
DDQLRPIDRYAIRFLELWDPVHDKAAMESDVQFEETEWELDRLEKYKEEMEAEIDEDEEP
LVYESWDAEFATEAYRQQVEILAQHQLMEDLEFEAKRKEAEEAENCDPTRNATHSELKPK
AKKKSKKAKFKSLKKASLSSELKAVKKEASVEFLSTDDEDICSEDVLESLSSQSSLQKKR
KRAELSLDSESGKSLKKKSKKLKKNIVDTFPQDHPNVPGVQYDEAMEVKPRENGVDLEHK
VVGRNRMGGKISITSMPVKRVLMIKPEKLKKGNIWSRDCVPSPDFWLPQEDAILCAMVHE
YGTHWSMISSTLYSMTAGGFYRGRYRHPVHCCERYRELVQRYVISAPDNPNSEKMTNASS
GKALLKITEENIRVLLDLAAEQPDREYLLQKHFTALLSTVWKARIRGNRLDSSLSWNGFY
SGARYFSTGNHMTRYFGRETTGKLKFGNTGHNFKLLAAALNDVCSTRMDDKKSQSYHGER
ASVTTDQLELTLEFQGENDLIVPFPSSVDLIVSDSVYLPLVNLDTCESSGARKRTRVAEM
RFRDAARACKEDFHGWASSVFPINDLKSRSASKSQSLGKHKLGVADSSKFAKSKHRKTGP
DNGESSHHLITDHQMPSLVQEDNHNLYSLSSPILTDYSFPFGMDEYPFPHEEPGSLEMIP
HDYIPGLISGLDIPKEI
NT seq
6354 nt
NT seq
+upstream
nt +downstream
nt
atgacatctaaaggtcccaggtctaaacttgatcatgagtcaagagctaagcgccaaaag
gcacttgaagcttcaagagaacccagtcgacctaaaacacattgggatcatgttttagaa
gaaatggtttggctatcaaaggactttgagtctgagcggaaatggaaattagctcaggca
aaaagggttgctctaagagctagcaaaggcatggtagatcaagcaacaagggaagaaagg
aagttgaaggaggaggagcaacgattgagaaaacttgctctcaatatttcaaaggatgta
aagaagttctggatgaaaatagaaaagctggtgctttacaaacatcaaattgagcttgac
gagaaaaagaaaaaggctcttgacaaacatcttgagtttcttctagggcaaacagaaagg
tactcgacaatgctggcagaaaatcttgtggaaacttataaaccatcgcaggtgaattct
acaaatgagccacacaattttcatgtccaagagattgacgaaagcaaggctgttgaacct
acagagttaaatgttgaacacgagtcagattctgtggagttcgatgaagaattcgatgta
cactctgaagatgaatctgaagataatgagcagaccatagatgaagatgaagctttaata
actaaagaagaaaggcaagaagaattggaagctttacaaaatgaagtggatcttcctctt
gaagagcttcttaaaagatatagtggagagaaagatgatttagaagttacccctgaaaca
agtaccggcggggcagaagagacagaagtagaagatcatggaaaagggaatgagtgttct
acgtcacgtaaggttcatgaaattggctcacttactttcaccggtcgtcgttgtaatgaa
agcaatggggaatcatcaaagatagaaaaccgtacaaagagagagactcgtgaaacaaaa
aatttgtccacgctacccatggcttttcccaaggacaatgtattttatgattttactgaa
gaacgtgaagatggtgactatgattttactggtggagaagataaggatgatgaaacaact
ttatctgaggaggagaaactggacaaagtggattcaaataatggcaaggatgagatttta
atgctacagaatgagagtgaaatacctatagaagaactgcttgcaaggtatggaaaggat
cactacaacgattacgattcagattttgacactgaagatacttctgctagttcagacgac
cttacggattctccatctcatgaagaaattgagccaatgggccttgatgtctctgtggac
aaaaatattgagcccggtaaatctcattcttctgcaagttcacctccagaggggaaagga
tccttaaaaagttttgaagtaagggagaataaggatgaaacttttgatgcagcaagatct
gtacaaccgcctgggaacacattctccacaactacagtgcgttcaaagtctcctggcctg
gattctccatctcatgaaggaattgagccagtgcgccttgatttctgtgtggacgataac
attgaccccagtaaatctcactctgcaagctcacctcctgaaatgaaaggatccttcgaa
aattctggagaaagggagagtgaggacagaattttcgatgctgcagctgcagcaagatct
gcacaaccaactgggaacacattctccacaactaaagtgcgaacaaaattccctttcctt
cttaagcattccttgcgtgaatatcaacatattggcttggattggcttgtgacaatgtat
gagaaaagactaaatgggattcttgctgatgagatggggcttgggaagacaatcatgacc
attgctttgcttgctcatcttgcttgtgaaaagggaatatggggtccccatcttatcgtg
gtcccaacaagtgtcatgcttaattgggagactgagtttctcaaatggtgtcctgctttt
aaaattttaacttactttggaagcgcaaaagagcgaaaggttaagaggcaagggtggatg
aaaccaaactcatttcatgtatgcataaccacttataggttggttatccaagattctaaa
gttttcaaacgcaaaaagtggaagtatctaatactagatgaagctcatctaattaaaaac
tggaagtcacaaagatggcaaactcttttgaatttcaattccaaacgacgaattttatta
actggtaccccccttcaaaatgacctgatggagctctggtccttgatgcactttttgatg
ccccatatttttcaatctcatcaggaattcaaggattggttttgcaatccaatttctgga
atggtagaggggcaagaaaaagtgaataaggaagttcttgatcgcctgcacaatgttctg
cgcccctttatactccgtcgactgaaaagagatgtagagaagcagctaccaaagaaatat
gagcatgtcataaactgtagattgtcacgaaggcaacgtcaattatatgaggactatatt
gctagttcagaaacacaagctactcttgccagtggcaatttctttagtatgattaatgtt
atcatgcaacttagaaaagtttgtaatcatcctgatttgtttgagggtcgtccaattatc
agttcttttgatatggcgggtatagtcatgcagttgagttcatctgtatgttccgcacta
tcacctggcctgttttctagagttgaccttaagggtttaggatttttattcactcatctt
gactttagcatgacttcatgggagggagatgaagtgagagctattgctactccatcaagt
ttaattaagggttctaccaatgtgaataaatctgaggaaattggatctggatttagatat
cggaagagattgcatggatcaagtatttttgcagacattcaaaacgcaattatggaggaa
agagtaaggcaggcaatggaacgagcagaagctatggcatggtggaattccttgagatgt
gacaaaaagccaatttattccacatcccttagggcgttggtgacaattaggcatccggtt
tatgacatatgccatgagaagtcggacccctcatcctattgttattcctcaaaaatttcc
gacattgtcctttcaccagtggaacgtttccagatgatgatgggcctagttgaaagcttc
acctttgcaattccagcagcaagggccccagcacctctgtgctggtatagtagaagccgt
tctgatgtgtttctggatccatcttatgagcaaaactgctctcgattcctgtttcccctt
ttaactccaatcaggtctgcaattattcggagacaagtgtatttcccagacagaaggcta
atacaatttgactgtggcaaattgcaggaacttgctattctacttaggaaactaaaatct
gaaggtcaccgagcattaatattcactcaaatgacaaaaatgctcgatatcttggaggct
ttcatcaatctgtatggttatacttacatgcgtctggatggatccactcagcctgaagag
agacagacattaatgcaacgattcaacaccaaccctaaaattttccttttcattttatcg
actcgaagtgggggtgtaggtatcaatcttgttggtgcagacactgttatcttttacgac
agcgattggaaccctgctatggatcaacaagctcaagatcgctgtcaccgcataggacaa
acaagggaagttcatatatatcgtctgattagtgaaagcaccattgaagagaatatttta
aagaaggcaaatcagaagcgtgctcttgataatcttgtcattcaaagtggtagttataac
actgaatttttccagaagcttgatcctatggagttgttctccggtcacaggtctcttgcc
attaaaaatatgcaaaaagaaaaaaatcattgcaccaatgcgaatgaggtttctgtatct
aatgcagatgtggaggctgctttaaagattgtagaagatgaagctgattatatggcatta
aagaaagttgaagaagaagaagctgtggataatcaggaatttacagaagaagtgattggg
aggatggaagatgatgagtttatgaatgatgatgaaatgaagcttgatgaaggtggggat
caaattagtggcatgattatatcaaacaaagataatgaggcaataatacacggagctaat
gatcttaatgaagagagagctgtaattgtagctagcaaagaagatgatgttgacatgctg
gcagatgtcaagcaaatggcggctgcagctgctgcaactggacaaactatctcgtccatt
gatgaccaactacgaccaattgatcggtatgcaatacgttttctggaactgtgggaccct
gtacatgataaagcggctatggagtctgatgtccagtttgaagaaacagaatgggaactg
gatcgtcttgagaagtataaagaggagatggaagctgagattgatgaagacgaggaacct
cttgtatatgaaagctgggatgctgaatttgcaactgaagcatatagacagcaagttgag
atcttggcacaacatcagttgatggaggatttggaatttgaagctaagcggaaagaagca
gaggaggctgaaaattgtgatcctacaaggaatgcaacacatagtgaactaaaaccaaag
gctaaaaagaaatcaaagaaagccaagttcaaatctctgaaaaaggcctccctttcttcc
gagctgaaagcagtgaaaaaagaagcatcagtggaattcttgtctacagacgatgaagat
atatgtagtgaagatgttcttgaatctctatcatcccaatcaagcttgcagaaaaaacgc
aaaagggctgagcttagtctggacagcgagtcaggcaagtccctgaagaagaaatctaaa
aaattgaagaaaaatattgtggatactttcccacaagatcatcctaatgtgccaggtgtg
caatatgatgaagctatggaagtaaaaccacgggagaatggtgttgatcttgaacataaa
gtagttggccgtaatagaatgggagggaaaatatctattacttccatgccagttaagcga
gttttgatgataaaaccagagaaacttaaaaaagggaatatttggtcaagggattgtgtt
ccttcccctgacttttggttgccacaggaggatgcaatactgtgtgcaatggtacatgaa
tatggtacacattggagcatgattagttcaactttatacagtatgactgctggtgggttt
tatagagggagataccgtcatcctgttcattgctgtgaaaggtatagggaactcgtacaa
aggtatgttatatctgctccagataatccaaatagtgagaagatgacaaatgctagctct
gggaaagctcttctcaaaatcacggaggaaaatattcgagtactgttagacttagctgct
gagcagcctgatagagagtacttacttcagaagcacttcactgccctgctctcaactgtg
tggaaggctagaatacgtggcaaccgtttagattcttcgctttcttggaatggtttctat
tctggtgcaaggtatttttcaactggtaaccacatgactcggtattttgggagggaaaca
acaggtaaattgaaatttggcaacacaggacacaacttcaagttactagctgctgcactt
aatgatgtttgttctacaaggatggatgataagaagtcccaatcctatcatggggaacgg
gcatcagtcactacagatcagttggagttaacacttgagttccagggagagaatgatctt
atcgtgccatttccatcttcggttgacttaatagtatctgattcagtttacttgcccttg
gtcaacctggatacatgtgaatcttctggcgctcgaaagcggacaagagttgcagagatg
cgtttcagggatgctgctagagcttgcaaagaagatttccacggatgggcttcctctgtt
ttcccgataaacgatctcaaatctcgctctgcttcaaaatcacagtcgctgggaaagcat
aagcttggagttgctgactcttctaaatttgcaaaatccaagcataggaagacgggaccg
gacaatggagaaagttcccaccacctgattactgaccatcagatgccatcacttgtccag
gaagataaccataacttatattccctcagttcaccaattcttacagattattcatttcca
tttggcatggatgagtatccattcccacatgaagagccagggagtctagagatgattcct
catgattatatcccaggattgatttcaggtctcgacatacccaaagaaatttga
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integrated database retrieval system
