KEGG   Cucumis melo (muskmelon): 103486798
Entry
103486798         CDS       T03195                                 
Name
(RefSeq) target of rapamycin complex subunit LST8-1
  KO
K08266  target of rapamycin complex subunit LST8
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo04136  Autophagy - other
cmo04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    103486798
   04136 Autophagy - other
    103486798
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cmo04131]
    103486798
Membrane trafficking [BR:cmo04131]
 Autophagy
  Other autophagy associated proteins
   mTORC1 complex
    103486798
   mTORC2 complex
    103486798
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 Beta-prop_IFT122_1st WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 DSE1_N Beta-prop_WDR75_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_NOL10_N Beta-prop_WDR41 CFAP251_N Beta-prop_EIPR1 ANAPC4_WD40 Beta-prop_IFT140_1st ASA1 NBCH_WD40 Beta-prop_HPS5 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_Vps41 WD40_RFWD3 WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_VPS8 Beta-prop_IFT140_2nd Beta-prop_IP5PC_F Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_DCAF12 PAC11 Beta-prop_NUP159_NUP214 Nucleoporin_N PROPPIN Beta-prop_WDR35_TULP_N CFAP43_N Beta-prop_WDR19_2nd DmsR_N
Other DBs
NCBI-GeneID: 103486798
NCBI-ProteinID: XP_008443103
UniProt: A0A1S3B820
LinkDB
Position
4
AA seq 316 aa
MTQPSVILATASYDHTIRFWEAKSGRCYRTIQYPDSQVNRLEITPDKRYLAAAGNPHIRL
FDINSNSPQPIMSYDSHTNNVMSVGFQCDGNWMYSGSEDGTVKIWDLRAPGCQREYESRA
AVNTVVLHPNQTELISGDQNGNIRVWDLTANSCSCELVPEVDTAVRSLTVMWDGSLVVAA
NNHGTCYVWRLLRGTQTMTNFEPLHKLQAHKGYILKCLLSPEFCEPHRYLATASSDSTVK
IWNVDGFTLEKTLIGHQRWVWDCVFSVDGAYLITASSDTTARLWSMSTGKEMKVYQGHHK
ATICCALHDGAEPSSG
NT seq 951 nt   +upstreamnt  +downstreamnt
atgactcaaccatcagtgatacttgcaaccgctagctatgatcatactattaggttttgg
gaggccaaaagtggtcgctgttaccgaaccatacaatatcctgattctcaagttaataga
ctggagattaccccagacaaaagatatttggctgctgctggtaatcctcacatacggttg
tttgatatcaattcaaacagccctcaaccaataatgagttatgattcacatactaacaat
gtaatgtcagtggggtttcaatgtgatgggaactggatgtattcaggttctgaggatggc
acagtaaaaatatgggatttaagggctcctggttgtcagagagagtatgaaagtcgtgct
gcagttaacaccgttgttttacatcctaatcagactgaactgatatctggagatcaaaat
ggtaatatccgtgtgtgggatttgactgcaaattcatgcagctgtgaattggtgccagaa
gtggatacagctgtaagatctttgacggttatgtgggatgggagcttggtagttgcagca
aataatcatggcacatgttacgtctggcgcttgttacgtggcacccagacgatgacaaac
tttgagccacttcataaacttcaagcacacaagggatacattctcaagtgtcttctttca
cctgaattctgtgaaccccatcgataccttgccactgcatcttctgacagcactgtcaaa
atctggaacgtcgatggattcacattagaaaagacccttataggacaccaacgctgggtg
tgggactgtgtcttctcagttgatggtgcatatcttataacagcttcttctgatactacg
gcaagactctggtccatgtcaactggcaaagagatgaaggtttatcaaggtcatcataaa
gcaactatttgttgtgcccttcacgatggagccgagccatcgtcgggttga

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