KEGG   Cucumis melo (muskmelon): 103486906
Entry
103486906         CDS       T03195                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 5A
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03020  RNA polymerase
cmo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103486906
  09124 Replication and repair
   03420 Nucleotide excision repair
    103486906
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103486906
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103486906
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     103486906
  RNA polymerase III system
   RNA polymerase III
     103486906
  RNA polymerase I system
   RNA polymerase I
     103486906
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103486906
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N
Other DBs
NCBI-GeneID: 103486906
NCBI-ProteinID: XP_008443287
UniProt: A0A1S3B7M5
LinkDB
Position
4:complement(29999255..30002955)
AA seq 227 aa
MEEDGFEAEPNPVEFGTCLSSYIDDGTTESHRYFLSRRTVVEMLKDRGYTINSPDIDLSL
QQFRDIFGQYPDVDRLKLYAAHHSDPSKRVLVVFCGTGAVKVNAIRNIAGQIANKDSLHG
LILIVQNQITNQAMKAVELFSFKVEIFQITDLLVNITKHALKPNHQVLTEEEKQKLLKQY
SIEEKQLPRMLRTDAIARYYGLEKGQVVKVTYDGDMTSAHVTYRCVW
NT seq 684 nt   +upstreamnt  +downstreamnt
atggaggaagatgggtttgaagcagagccgaatcctgtggagttcggcacttgcttgagt
tcctacatcgatgatggaaccactgagagccacagatacttcctttctcgaagaacagtt
gtggagatgcttaaggaccgaggttacactatcaactcccccgatatcgacctctctctt
caacaattccgagatatttttggccaataccccgacgttgatcgcctaaaactatacgcc
gctcatcactccgatccctccaaaagagttcttgtagtattctgtggaactggtgcagta
aaagttaatgctattcgcaatattgctggccaaattgctaataaggacagtttgcatggt
cttattttaattgtgcaaaatcaaattacaaaccaagccatgaaagcagttgagcttttc
tcgtttaaggttgaaatattccagattactgacttgctcgtcaacatcacaaagcatgct
ttaaagccgaaccatcaagtactaacggaggaagaaaaacaaaagcttttgaaacaatac
agtatagaggaaaaacagcttcctcgtatgttacgtacggatgctatcgctcgatattat
ggactggagaaagggcaagttgtgaaagtgacttacgatggtgatatgactagtgcacac
gtaacttaccgttgtgtttggtga

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