Cucumis melo (muskmelon): 103486923
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Entry
103486923 CDS
T03195
Name
(RefSeq) probable polyribonucleotide nucleotidyltransferase 1, chloroplastic
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103486923
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103486923
03016 Transfer RNA biogenesis [BR:
cmo03016
]
103486923
Enzymes [BR:
cmo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103486923
Messenger RNA biogenesis [BR:
cmo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103486923
Transfer RNA biogenesis [BR:
cmo03016
]
Prokaryotic type
tRNA degradation factors
103486923
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
103486923
NCBI-ProteinID:
XP_008443302
UniProt:
A0A1S3B784
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All DBs
Position
4:complement(29787726..29808324)
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AA seq
922 aa
AA seq
DB search
MLANPCCLHFQPCYSHTSEFSHFGTSKISLSSYFPRFHGSTKSKFSSLSLLRSKKSGKRL
VTKALSESSVPDSVAASDGAPGSLRPFSVKIPVGDRHILVETGHIGRQASSAVTVTDGET
IVYTTVCLADTPSEPSDFFPLSVNYQERFSAAGRTSGGFFKREGRARDHEVLICRLIDRP
IRPTMLKGFYHETQILSWVLSYDGLHTPDCLAITAAGIAVALSEVPNSKAVAGVRIGLVG
DKFIVNPTTKEMEDSELDLVLAGTDSAILMIEGYCNFLSEEMLLQAVEIGQNAVTAICKE
VDSLVRERGKPKMLDAIRLPPPQLYKHVEEIAGNELEKVLQIRNKIPRRKALSSLEEKVI
TILTEEGYVSLDTTSGGLEPVPDLVEDEDEDDVVVDGEVDEGDVHIKPTTRKPIPTLFSE
VDVKLVFKEVTSKFLRRRIVEGGRRSDGRTPVEIRPINSKCGLLPRAHGSTLFTRGETQS
LAVVTLGDRQMAQRVDNLVDVDELKRFYLQYSFPPSCVGEAGRIGAPSRREIGHGMLAER
ALEPSLPSEDDFPYTIRVESTITESNGSSSMASVCGGSLALQDAGVPIKCPIAGIAMGLV
LDTKEFGGDGTPLILSDITGSEDASGDMDFKLAGNEMGITAFQMDIKVGGITIPIMREAL
LQAKDGRKHILAEMLNSYPPPSKRLSPYAPLIHVMKVQPEKINLIIGTGGKRVKSIIEET
GVEAIDTRDDGIVKITAKDLTSLEKSKAIISNLTMVPTIGDIYRNCEIKTIATYGVFVEI
APGREGLCHISELSSDWLAKAEDAFKVGDKIDVKLIEVNEKGQLRLSRRALLPDADQDSN
SKENTNNPSRNKTAMQKGTDKGTSKKAGKENIEQTNVQKGGTAPMGGSLEDAAKLQKKFI
RKGVTATKERPISKEQTESTSS
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaaacccttgctgcctccatttccaaccatgctattcccatacgtcggaattc
tctcattttgggacatccaaaatctccttgtcttcttatttccctcgcttccatggttcc
acgaaatccaagttctcttctctttcgcttcttcgaagcaagaaaagcggtaagagattg
gtcaccaaggctctttccgagtcttcagtacctgactctgttgcggccagcgatggggca
cccggttctttgcggcctttctctgtcaaaattcctgttggggatagacatattctggtt
gagacgggccatattgggaggcaagctagtagtgctgttacagtaactgacggagaaact
attgtttatacaactgtttgtttggctgatacaccaagtgaaccttcagatttctttcct
ctttctgttaattatcaagagcgtttttctgcagcaggtcggactagtggaggattcttc
aaacgagaaggaagagcaagagatcatgaggttctcatttgtagattgattgataggcct
atacgtccaactatgctcaaaggtttttaccatgaaacccagatattatcttgggttttg
agttatgatggtctgcacactcctgattgtttggcaattacagcagccggaatagcagtt
gcgctctcagaagttcctaattcaaaagcagttgctggagttcgaattggtcttgttggc
gacaagtttattgttaacccaactactaaagagatggaagactctgagcttgatttagta
cttgctggcacagatagtgcaatattgatgatagaggggtattgtaattttctatcagaa
gagatgttgctccaggctgtagaaattgggcagaatgctgtaacagcaatttgcaaagag
gtggattctttagtaagagagcgtgggaaaccaaaaatgcttgatgccattaggcttcct
cctcctcagctatataaacacgttgaagaaattgctggaaatgagttagagaaagttctg
caaattagaaacaaaattccccgacgaaaggctctctcatcattagaagaaaaagttatt
accatattgacagaagaaggttacgtcagtttagataccacttcagggggtctcgaaccc
gtacctgatttggtggaggatgaagatgaggatgatgtagtggtggatggtgaagttgat
gaaggtgatgtccatattaaaccgactactcgcaagcctattccaacactcttttctgag
gtagacgtaaagttagtatttaaagaagtgacatccaagtttctccgaagacgtattgta
gagggtggaagaagaagtgatgggaggacaccagttgagatacgtccaattaactcaaaa
tgtgggttacttcctcgggcacatggcagcacacttttcactcgtggtgaaactcagtca
cttgctgtggttacgttgggggataggcaaatggcacaaagagtggacaaccttgttgat
gtagatgagttgaaaaggttctaccttcagtactcatttcccccatcgtgtgttggagaa
gctgggcgtattggtgcacctagtcgaagggaaattggtcatggtatgcttgcggagaga
gcgctggaaccatctttaccttctgaagatgattttccatacaccattcgtgttgagagt
acaatcaccgaaagcaatggctcctcaagcatggcatccgtttgtgggggttcattggct
ttgcaagatgctggagttccaattaagtgtccaattgctggtatagcaatggggttggtt
cttgatacaaaagaatttgggggagatggaactccacttattctgtctgacataacagga
tctgaggatgcttccggagatatggattttaagttagctggtaacgaaatgggcataaca
gcatttcagatggacataaaggtgggaggcattactatacccattatgagagaggcgctc
ctgcaagcaaaggatgggcgtaagcatattcttgctgaaatgttgaactcttatcctcct
ccttcaaaaaggctttcaccgtatgctccattgattcacgtcatgaaggttcaacctgaa
aagataaatctaatcattggtactggtggaaaaagggtgaagagcattatagaggaaaca
ggagttgaggctattgacactcgagatgatgggatagttaaaattactgcaaaggatttg
acaagcttggaaaaatctaaagctattattagcaatctgacaatggttccaactattggt
gatatctataggaactgtgagatcaagacgattgctacttatggtgtatttgtagagata
gcacctggacgagagggactttgccatattagtgagttgagctcagattggttggcaaag
gcagaagatgcttttaaagttggagacaaaatcgatgtcaaactcattgaggtaaatgaa
aagggccagctccgccttagccgtcgtgcattgcttccagatgctgatcaggattcaaat
tcgaaggagaatacaaacaacccgtctagaaacaagacagcaatgcaaaagggcactgat
aaaggtacatctaagaaagctggtaaggagaacatagaacaaactaatgtgcagaaaggt
ggtactgcaccaatgggtggctcattggaagatgctgcgaaactgcagaagaaatttata
cggaaaggagtaaccgcgaccaaagaaagacctataagcaaagaacagacagaaagcact
agtagttga
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