Cucumis melo (muskmelon): 103486961
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Entry
103486961 CDS
T03195
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X2
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103486961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103486961
Enzymes [BR:
cmo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
103486961
DNA repair and recombination proteins [BR:
cmo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
103486961
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
103486961
NCBI-ProteinID:
XP_008443352
UniProt:
A0A1S3B8L3
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Position
4:complement(29501017..29506710)
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AA seq
515 aa
AA seq
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MLFFISNLPMKSVLLLWFRPFLHPFFSLAVNESRLRVATLIRPLQKNAMSSRLNRSSVPL
FTQNSEPRGAGRGVSVRRNSNEAVVEEHDCKVDIQSFRDDPSKIEAMTVQKLRMTLRSVG
LLAKGLKRDLVAALQSFVENGTVVENQSTQQTERNSSVSASYGDTVKAETKILTPKKRQS
AESDRVSSGAIGSNPSSRKINGSSEVVSSIVKQEDGVEGMQNEPWAVLAHKKPKKGWIPY
NPRIMRPKPLSKDTKSVKILSWNVNGLRALLKGSSAVELAEREDFDILCLQETKLQEKDI
LTITKSLMDGYHYTYWTCSVSKLGYSGTAIISRIKPISVRYGLGISEHDGEGRVVMVEFD
SFFLLNVYVPNSGDGLKRLSYRITEWDPSLSNYMKELEKLKPVILTGDLNCAHQEIDIYN
PAGNRKSAGFTIEERQSFETNFLEKGFVDTFRQKHPDVVGYTYWGYRHGGRKTNKGWRLD
YFLVSDRMAEKVHDSYILPDVGGSDHCPIGLVLKL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgttatttttcatctcaaatttgcccatgaagtcagttttgctattgtggtttaggcct
ttccttcatcccttcttcagccttgcagtgaatgagagtaggctgagagttgcaacattg
atacgacctttgcaaaagaatgcaatgtcgtcgaggttgaatcgttcctctgtaccttta
ttcacacagaattcagagcctagaggggcgggaagaggtgtaagtgtgcgaaggaattcc
aatgaggctgttgtcgaggaacatgattgtaaagtggacattcaaagttttagggatgac
ccgtcgaaaattgaagctatgacagtccaaaaattgagaatgacattaagaagcgtgggt
cttctagccaaagggcttaagcgtgaccttgtagctgcactgcaaagctttgtggagaat
ggaacagttgtagaaaatcagagcacacaacagacagagagaaattctagtgtatcagct
tcttatggtgacactgtgaaagctgaaacaaaaatcttaacaccaaagaagaggcagtca
gctgaatctgacagggtttcaagtggtgcaataggcagtaacccatctagcagaaagata
aatggatcctcagaagttgtttccagcattgtaaagcaagaggatggagtagaggggatg
caaaatgaaccatgggctgttcttgctcataagaagcctaaaaaaggttggatcccgtat
aacccaagaatcatgaggcctaaacctctttccaaggatacaaaatctgtgaaaatttta
tcttggaatgtcaatgggttaagagccttacttaaggggtcttcagcagtggaacttgct
gaaagggaagattttgacatattgtgcttacaggagaccaaattgcaggaaaaggacata
ctaactattacaaaatctctcatggatggatatcattatacctactggacatgcagcgtt
tctaaacttggttattctggaactgcaatcatatcccggataaaaccaatttcagttaga
tatggtttaggcatatcagaacatgatggtgaagggcgggttgtgatggtggagtttgat
tctttctttttattgaatgtttatgttcctaattctggagacggattgaagagactgtca
tacaggattaccgagtgggatccatctctcagtaactatatgaaggagttggaaaagttg
aagcccgtgattttgactggtgatctaaattgtgctcatcaagagatagacatctataat
cctgcgggaaaccgaaaaagtgctggtttcaccatcgaagaaaggcaatcatttgagacc
aactttctggaaaaggggtttgttgatacttttagacaaaagcatcctgatgttgttggc
tatacatattggggttatcgtcatggtggacgcaaaacaaacaaaggatggcggctggac
tattttcttgtatcagataggatggcagagaaggtacacgactcttacatactccctgat
gtgggaggtagtgatcactgtcccattggccttgttctcaagctttag
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