Cucumis melo (muskmelon): 103486973
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Entry
103486973 CDS
T03195
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04120
Ubiquitin mediated proteolysis
cmo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103486973
04120 Ubiquitin mediated proteolysis
103486973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmo04121
]
103486973
Enzymes [BR:
cmo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103486973
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
U-box type E3
103486973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
103486973
NCBI-ProteinID:
XP_008443369
UniProt:
A0A1S3B8K9
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All DBs
Position
4:complement(29440981..29450336)
Genome browser
AA seq
1043 aa
AA seq
DB search
MATSKPQRSPEEVEDIILRKVFLISLTDSSDSDSRIVYLEQTAAELLSEGKPLRISRDVM
ERIIIDRLSAHIPSAEPPFQYLIGCYRRAHDETKKIASMKDKTLRSDMEIALKQAKKLTI
SYCRIHLGNPELFSSGADLGTNSNTSPLLPLIFSEVGGSSMDGFGASTSVGGAYQSPPGF
LEEFLRDSDFDTLEPILKGLYEDLRGSVLKVSALGNFQQPLRALRYLVSFPVGAKSLVNH
PWWIPTGKYSNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLS
SFTTIKTVMNNLYDGLSEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASS
GMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYSNRLELRGLTALHASSEEVTEWINN
GTQLRTDNSGQSTDSESRLLQSQEASSSGSNSTIGSSTAKARSSSDKTRYPFICECFFMT
ARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQGPAPQLEMDIARLEKEIELYSQ
EKLCYEAQILRDGTLIQQALTFYRLMVIWLVGLVGGFKMPLPSACPMEFASMPEHFVEDA
MELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSS
VTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHR
NAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQE
RQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQL
VGPQRKSLSLKDPEKYEFRPRALLKQIVHIYVHLARGDTENIFPAAISKDGRSYNEQLFT
AAAAVLRRIGEDSRIIQEFTDLGNKAKDAASEAMDAEATLGDIPDEFLDPIQYTLMKDPV
ILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPNEELKARIKEFIRSQELKKQLD
GGGVAMQSSKATIQPTSGEMLID
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcaaaaccccaaaggtcacctgaggaggtcgaagacatcatccttcgcaaa
gtcttcctaatttctctcaccgattcctccgattccgattccagaatcgtctatctcgag
caaaccgccgccgaacttcttagcgagggcaaaccattgaggatttcaagggatgtaatg
gagcgcatcataatcgatcgtctttccgctcatatcccctccgccgaacccccttttcag
tacctaattgggtgctaccgtcgagctcacgacgagactaagaaaatcgcttccatgaag
gataagactttgcgctctgatatggaaattgctcttaagcaagccaagaagttgacgatt
tcgtattgtaggattcatttagggaatcctgaattgttttcttccggtgccgatttaggt
actaactccaatacttcgcctttgcttcctttgattttctctgaggtcggtgggagctcc
atggatggatttggggctagtactagtgttggtggagcctatcagtcccctccgggtttc
ctggaggagtttctccgtgactcggattttgatacattagaacccattttgaaggggttg
tatgaggatttaaggggtagcgtccttaaagtttctgctcttgggaacttccagcagccc
ttaagagctcttaggtatctggtcagctttcctgttggtgctaagtctctcgtgaatcac
ccttggtggattcctactggtaaatattccaatgggcgtgtcattgagatgacaagcatt
ttggggcctttcttccatgtcagtgctctgcctgaccatgccatttttaagagccaacct
gatgttggccagcagtgcttttcagaagcatcaactcgtagaccagctgatttactatct
tcgttcactacaattaaaacagtcatgaataatttatatgatggcctttcggaagttctt
ctctcccttctcaagaacacagagacccgtgaaaatgttctcgagtatctggcagaggtg
ataaatagaaactcatcaagggctcatatacaggttgatcctctctcctgtgcaagttcg
ggcatgtttgttaatctcagtgccatcatgttacgtctttgtgagccttttctagatgca
aacttgaccaaaagggataaaattgatccaaaatatgtatgttatagtaaccgattggag
ttgagaggattaactgctctacatgcttcatctgaagaagttaccgagtggattaataat
ggtactcagttgagaactgataactctgggcagtccaccgacagtgaaagtcgcttgcta
caatcccaggaggcttccagttctggcagtaattctactattggatcttctactgcaaaa
gcaagatcgagtagtgataaaactaggtacccgtttatatgcgagtgcttctttatgact
gcaagggtgctgaatttgggcttgttaaaagcattttcagacttcaagcatttagtacag
gatatatctaggtgtgaagatacattgtccacacttaaagccatgcagggacaaggccct
gccccacagctcgaaatggatatagctcgccttgagaaggaaatagagttgtactcacag
gaaaaactttgttatgaagctcaaatactgagggatgggacactgatccagcaagctctt
actttctatcggttaatggtcatctggttagttggtttggttggtggttttaaaatgcct
cttccatcagcttgcccaatggaatttgcatccatgccagaacattttgtggaagatgca
atggaattgcttatatttgcttctcggattccaaaagctttggatggcatcaatttggat
gattttatgaacttcattatcatgttcatggcaagtccagaatatattagaaatccttac
ttaagagcaaagatggttgaagttctgaactgctggattcctcgtagaagtggttcatct
gtaacggcaacactatttgaaggccaccaactatcgcttgagtatcttgttaggaatctt
ttaaaactctatgtagacatcgagtttactggatcacatacacagttttatgacaagttt
aacatccgccataacattgcggaacttctggaatacctttggcaggttcctagtcatcgc
aatgcttggagaatgattgccaaggaagaggagaagggcgtttacttgaatttcttgaac
ttcctaatcaacgatagcatatatcttcttgacgaaagtcttaataagattctcgaactt
aaagagcttgaagctgaaatgtcaaatactgcagaatgggaacggcgacctgctcaagag
aggcaggaaagaactcggctctttcattcccaggaaaatatcatccgaatcgatatgaaa
ttagcaaatgaggacgtgagtatgttggcatttacttcagagcaaatcacagctcctttc
ctacttccagagatggtcgaaagggtggccagcatgcttaattattttctcttgcaactt
gttggtcctcagcgaaaatctcttagtctgaaagaccctgaaaagtatgaattccgtcca
agagcgttgcttaagcagattgttcacatatatgttcatctggcaagaggcgatacggag
aatattttcccagctgccatttcaaaggatggacgatcgtacaacgagcagttgttcact
gctgcagcagctgtacttcgacgtattggagaagatagtaggataatacaggagtttact
gaccttggtaacaaagccaaggatgcagcttctgaggcaatggatgctgaagctactcta
ggagatatacctgatgaattcctcgacccgatccaatacacattaatgaaggaccctgtg
atcttaccttcttcgaggatcactgtcgacagacccgtcattcaaagacatctcctcagc
gatagcaccgacccattcaaccggtctcatctgaccgcagacatgctaataccgaacgaa
gagttgaaagcaagaatcaaagaatttattaggtcgcaagaactgaagaagcaactagat
ggaggaggggttgcaatgcagagcagcaaggcaaccatccaacccacaagtggagaaatg
ttgattgattaa
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integrated database retrieval system
