Cucumis melo (muskmelon): 103487021
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Entry
103487021 CDS
T03195
Name
(RefSeq) FACT complex subunit SSRP1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmo03000
]
103487021
03036 Chromosome and associated proteins [BR:
cmo03036
]
103487021
Transcription factors [BR:
cmo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
103487021
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
103487021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
DUF6209
Motif
Other DBs
NCBI-GeneID:
103487021
NCBI-ProteinID:
XP_008443431
UniProt:
A0A1S3B828
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Position
4:complement(28946274..28953054)
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AA seq
642 aa
AA seq
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MADGQLYNNISLGGRGGTNPGQLKTDQRGIQWKKQGGGKAIEVDKADIVGVTWMKVPRSN
QLGIRVKDGLYYKFIGFRDQDISSLTKYFQSNCGIAPEEKQLSVSGRNWGEVDLNGNMLT
FLVGSKQAFEVSLADVAQTQLQGKNDVMLEFHVDDTTGANEKDSLMEISFHIPNTNTQFV
GDESRPPAQVFRDKIMSMADVSAGIEEAVVTFEGIAILTPRGRYSVELHLSFLRLQGQAN
DFKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVQSTLQIG
DELLNTKYKDKLEPSYKGLIHEVFTTILRGLSGAKITRPGKFRSCQDGYAVKSSLKAEDG
VLYPLEKSFFFLPKPPTLILHEEIDYVEFERHAAGGSNMHYFDLLIRLKTEQEHLFRNIQ
RNEYHNLFDFISGKGLKIMNLGDAQARDGVAAVLQEDDDDAVDPHLERIRNEAGGDESDE
EDSDFVADKDDGGSPTDDSGGDDSDGSASGGEKEKPGKKEAKKDPSASKAPAKKKSREGA
DDGSKKKKQKKKKDPNAPKRAISGFMFFSKMERENIKKSNPGISFTELGRVLGDKWNKMS
AEEKEPYESKARDDKKRYKEEISGYKNTQPMNIDSGNESDSA
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggctgacggtcagctctacaacaacatctctctcggcggtcgtggaggcactaaccct
ggccagcttaaaacagatcaaagaggtattcagtggaagaagcaaggaggtggcaaggca
attgaggtggataaagcagacattgttggtgtaacatggatgaaggttccaaggtcgaac
cagttgggaattcgggtcaaagatgggttgtattacaagttcattggattccgcgaccag
gacatcagcagtttaaccaaatatttccagagtaattgtggaatagcaccagaggaaaag
cagctttctgtcagtggtcgtaattggggtgaagttgatctgaatggaaatatgcttact
ttcttggttggttcaaagcaagcatttgaagtgtctctagctgatgtagcccaaacacaa
cttcaagggaagaacgatgttatgttggagttccatgtagatgatacaaccggagctaat
gagaaagattctctaatggagataagttttcacataccaaataccaatactcaatttgtt
ggtgatgaaagtcgccctcctgctcaggttttccgtgacaaaattatgtctatggcggat
gttagtgcgggcattgaggaagctgtggtcacatttgagggtattgctatcctcactcca
aggggtcggtacagtgtagaactccacctttcattccttcgcctccaaggacaagccaat
gactttaaaatacaatacagcagcgttgttcgccttttcttacttccaaagtcgaatcag
ccacatactttcgtggttgtaactttagacccaccaattcgtaaaggccaaactttatac
cctcatattgttctgcagtttgaaactgactatgtggttcaaagcaccctgcaaataggc
gatgaacttctcaacacaaagtacaaggacaagttagaaccttcttataaggggcttatt
catgaggtgtttaccaccatattgcgcggtttgtctggtgcgaaaattaccagacctgga
aaattccgcagctgtcaagatggttatgctgtcaagtcatctttgaaagctgaagatggt
gtcttatatccacttgaaaaaagtttcttctttcttcctaagcctcctacccttattctt
catgaggagattgactatgttgaatttgagaggcatgctgctggtgggtcaaatatgcat
tactttgatcttctcattagactgaaaactgaacaagaacatctctttagaaatattcag
aggaatgaataccataatctttttgactttatcagtgggaagggtttgaagatcatgaac
ttgggagatgctcaggctagagatggcgtggcagctgttctccaagaggatgatgatgat
gctgttgacccacatcttgagcgcattagaaatgaagctggtggagatgagagtgatgaa
gaggattcagattttgttgctgacaaggatgatgggggttctccaactgatgattcaggt
ggggatgattctgacggaagtgcaagtggaggtgaaaaagagaaacctggaaaaaaggag
gccaaaaaggacccttcggcttccaaggcacctgccaagaagaaatctagagaaggggct
gacgatggttcaaagaagaaaaaacagaaaaagaagaaggatccaaatgcaccaaagaga
gcaatatctggtttcatgttcttctctaagatggaaagagagaacataaagaagagtaat
cctggaatttctttcacggagttagggcgagtacttggagacaagtggaataagatgtcg
gcggaagagaaagaaccttatgaatcgaaggctcgggatgacaaaaaacgatacaaggaa
gaaatcagtggatataagaatacacagccaatgaatatagactccgggaatgaatctgac
agtgcttag
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