Entry |
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Name |
(RefSeq) dicer-like protein 4 isoform X1
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KO |
K11592 | endoribonuclease Dicer [EC:3.1.26.-] |
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Organism |
cmo Cucumis melo (muskmelon)
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Brite |
KEGG Orthology (KO) [BR:cmo00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:cmo03036]
103487375
Chromosome and associated proteins [BR:cmo03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103487375
microRNA pathway
RISC loading complex
103487375
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
2:complement(14055254..14073546)
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AA seq |
1652 aa
MMPDGETNSTTEVSENFRPTSFVPVERLMGPSLMNDRDAGSSTSTSEKDPRRIARKYQLE
LCKKALEENIIVYLGTGCGKTHIAILLIYELRHLIRRSQNGICVFLAPTVALVQQQAKVI
EDSIDFKVRVYCGGSKSLNSHYDWEREMEEYEVFVMTPEIFLRNLYHCYIKMDCVELLIF
DECHHAQVKSDHSYAEIMRVFYKTDDPKRPRIFGMTASPVVGKGACNQQNLSRSINSLEK
LLDAKVYSVEDREELHAFVSSPIVNIYYYGPVANGSSSSFMSYCSRLEDVKRKCIVALGQ
VEGEHEVLLATKKLLFRMHENILFCLESLGVWGAWQASKILLSGDNSERSELIEEAERNP
RNDSLSDRYLNQAAEIFASGCKEDGGISDMLNVDFLEEPFFSKKLLRLIGILSSFRQQLN
MKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGE
LNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKEL
GLINEFRKDENRMNREISSRSSNETFHSHEESIYRVASTGASITSGRSISLLHEYCSKLP
HDEYFDPKPKFFYFDDLGGTVCHVNLPSNAPIPQVVSSPQSSRDAAKKDACLKAVEELHK
LGALSDYLLPMRGRGSANEQESELNSSDSDSSEDERSRRELHEMIFPAALKESWTGSGYL
VLYCYHIKCTPDPRDRNYKEFGLFVKAPLPQEAERMDLELHLARGRSVMVNLMPSGVVEL
LEEEITQAESFQEMFLKVILDRSEFVQEYIALRNNSSRSVSSTSYLLLPMIFHDNEGSLF
IDWNVIRRCLSSQIFQNHACSIVKGTASSDTHLMLYDGRRSSSDIENSLVYVPYKGEFFF
VTNIERGKNGHSQYKNSGFSSHFEHLKTKFGIHLNHPEQPLLRAKPLFLLHNLLHNRKRE
DSEAHHLEEYFIDLPPEVCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKCRLAAA
FPAGAEVTANRILEALTTEKCQERISLERLEILGDSFLKFVVARYLFLTHDKFDEGELTR
RRSYLVKNFNLLKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRKDIHSHDEAR
NNGKVNETKCSKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIRVEFEASLV
TNALMASNGYVLLADSIDISALQNSLGHQFLHKGLLLQALIHPSYHKHGGGCYQRLEFLG
DAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSTSLLSD
IKSYVHFIKAPPSERDSREQPRCPKALGDLVESSVGAVLVDTGFDMNCVWKIMLSFMDPI
MNFSGFQLSPIRDITEFCQNCGWKLKFNSSKMEGYYSVKAEVKGGNFHAAASAANRRKKD
AEKIAANLILTKLKAKGFIPEVNSLEEILKSSKKMEPKLIGYDETPSVMIDQVDNGLRTS
NVPEFSSENSDPRMHYEVDNSHPVRITRISKMLVSSSRTAGEQLKLAFEGHDSPTDLQSS
SGRSGKTTARSRLYEICAANHWNRPSFDCMNEEGPSHLKMFTYKVGLEIEETPDTIFEFF
GAPHLKKKAAAEHAAEAALWYLKKGGYLAGTD |
NT seq |
4959 nt +upstreamnt +downstreamnt
atgatgcctgatggcgagaccaattctacgactgaggtcagcgaaaattttcgacccact
agttttgtgccggtcgagagattaatgggtccgtctctgatgaatgatcgggatgcgggt
tcaagtacaagtacatcagagaaagatcccaggagaatcgcaaggaaatatcaattggag
ctgtgcaagaaagctttggaagagaatatcattgtgtatctcgggacaggctgcggcaag
actcacattgctatactcctgatatacgagttgaggcacttaatcaggaggtcccagaat
ggtatctgtgtgtttctggctcctacagttgctttagttcaacagcaagcaaaagttata
gaagactccatagatttcaaagtcagggtctactgtggaggttccaaaagcttgaatagt
cattatgactgggaaagagagatggaagaatatgaggtttttgtcatgacccctgaaata
tttctgcgtaatttataccactgctatatcaagatggattgtgttgagcttctaatattt
gacgagtgtcatcatgctcaagtcaaaagtgaccattcttatgcagaaatcatgagagtg
ttctataaaacagatgatcctaaacggcctcggatttttggtatgactgcatctccagtt
gtaggaaaaggtgcttgtaatcagcaaaatttatctagaagcatcaatagtctcgagaag
ttacttgatgcaaaggtttattcagttgaagatagggaagaactgcatgcatttgtgtca
tcaccaattgttaacatatattattatggtcctgttgcgaatgggtcttctagctccttt
atgtcctactgttccagacttgaggacgttaaacgcaagtgcatagtggctcttggtcag
gttgaaggtgagcatgaagttctgctggccaccaagaaattgttgttcagaatgcatgaa
aatatcttattttgtttggaaagccttggtgtttggggggcatggcaggctagtaaaatt
ctccttagtggagataactctgagcgaagtgaattgatagaggaagcagagagaaaccca
agaaatgactctttaagtgataggtaccttaatcaagctgctgaaatttttgcatcaggt
tgcaaggaagatggtggaatctcagatatgttaaatgttgattttttagaggaacccttt
ttctcaaagaagcttctacgacttattggaattctttcttccttcaggcaacaactcaat
atgaaatgtataatttttgtgaatagaatagttatagctcggtccttgtcatacatactt
cagaatctaaaatttttggcatattggaagtgtgattttcttgttggtgtacactcaaaa
ttgaggagcatgtcaaggaagaccatgaaccatattcttacaaaattccgatcaggggag
ctaaacctcttgatcgctacaaaggttggtgaagaagggcttgatattcagacttgctgt
cttgtcatacgatttgatcttcctgaaacagtatctagctttatccaatcaagaggtcga
gcacgaatgcctcagtctgaatatgcattccttgttgatagtgggaatgaaaaggagcta
ggattgataaacgaatttcgaaaagatgaaaatcggatgaacagagaaatttcttcacgc
tcatccaatgagacatttcatagtcatgaagaaagcatctatagagtggcttcaactggt
gcatctattacatctggacgtagtatatccttactgcatgaatattgctcaaaacttcca
catgacgagtacttcgaccccaagccgaagtttttctattttgatgatttaggagggact
gtatgtcatgtaaatctaccctccaatgcaccgatcccccaagttgtcagcagcccacaa
tcttctagggatgctgctaaaaaggatgcttgtctaaaagctgtagaggaattgcataaa
cttggtgctctcagtgactatctcttgcccatgagaggcagaggcagtgccaatgaacag
gaatcagaacttaactcctccgattctgacagctctgaagatgagagatcgcgtcgagaa
cttcacgagatgatatttcctgctgctctaaaagagtcttggactggttctggatatctt
gttctttactgttaccatataaaatgtactccagatcctagagatagaaactacaaagaa
ttcggtttatttgtgaaggcaccattaccccaggaggctgagagaatggaccttgagctt
catcttgcacgtggaagatctgtaatggtaaatttaatgccatcaggggttgtggagctt
ttggaggaggagattacccaggcagagagttttcaggagatgtttcttaaggtcatttta
gacagatcagaatttgttcaggagtacattgctttgaggaataattcttctagatctgtt
tcatcaacatcttacttgttgcttcctatgatttttcatgataatgagggatcacttttc
atagattggaatgttattagaagatgtttgtcctcccaaattttccagaatcatgcatgc
tctattgtcaagggaactgcttcctcggatacccacctgatgctttatgatggccgtaga
tcgtcaagtgatattgagaatagtttagtgtatgtcccctacaagggtgaattctttttt
gttactaacatcgagagggggaagaatggacacagtcaatacaagaactcaggcttctca
agtcattttgaacatttgaagacaaagtttggcattcatcttaaccaccctgagcagcct
cttcttcgtgcaaaacctctgttccttttgcacaacttgcttcataatagaaagcgggaa
gattctgaagcacatcatctggaagaatattttattgatttgcctcccgaggtttgtcag
ttgaaaataatcggattttcgaaagatattggaagctccatatctttgttgccatcaatt
atgcatcgtctggaaaatttgcttgttgccattgaattgaagtgtaggctagcagctgct
tttccagcgggtgctgaggttactgctaacagaattctggaagcactcaccactgagaag
tgccaggaacgcatttccctggaaaggcttgaaatacttggtgattcattccttaaattt
gtagtagcaaggtacctttttcttacccatgacaagttcgacgaaggagaacttacaaga
agacgttcttatttggtgaaaaatttcaatttgctcaagctagcaactagaaagaattta
caggtatatatacgtgaccagccatttgaacctagtcaattttatttacttggtcgtcct
tgcccaagaatttgtaatgaggaaactagaaaagatatccattctcacgatgaagcaaga
aataatggaaaagtcaacgagaccaagtgcagcaaaggccatcattggttacaaaagaaa
acgatcagcgatgtggttgaagctctggtaggagcattcctagttgacagtggcttcaaa
gctgcaattgcatttctcaaatggatcgggatacgagtagaatttgaagcttcactagtt
accaatgctctcatggcaagcaatggttacgtcctacttgcagatagtatagacatttct
gcacttcaaaattcattaggccatcagtttctccataaaggtctgctgcttcaggcactc
attcatccatcttaccacaagcatggaggaggttgttaccagagattagagtttcttgga
gatgctgtcctggattacttgatcacatcatatctatattcagcgtatcctaaactgaag
ccaggtcaattgacagatttgagatcagtgtttgtgaggaatgaggcttttgccaatgtt
gccgtagatagattcttctacaagtttctgctttgtgattctactagccttctaagtgat
ataaaaagttatgtgcacttcattaaagcacctccttctgaaagggattcacgtgagcag
ccgagatgtccaaaggctttgggagacttggttgaatctagtgttggggccgttcttgtt
gatacagggtttgacatgaactgtgtttggaagataatgttatcttttatggatcccatc
atgaacttttcaggcttccagcttagtcctattcgggacataacagaattttgtcaaaat
tgtggctggaaactaaagtttaattcatcaaaaatggaaggatattattcagtcaaagca
gaggtgaaaggaggcaactttcatgccgctgcttctgcagccaaccgtcgaaagaaagat
gccgagaaaattgctgcgaacttaatactcacaaagctgaaggccaaaggattcatacct
gaggtcaattcattagaagagatcttaaagtcgagcaagaagatggaacctaagttgatt
ggttatgatgaaacaccctcggtcatgattgatcaagttgacaatggtcttagaacatca
aatgtgccagaattttctagtgaaaactcagatcctcgcatgcactatgaagttgacaat
tctcatccagtacgcattacacggataagcaaaatgttggtttcttcatctcgaactgca
ggggaacaactaaagctggcctttgaaggtcacgatagtccaacagacttgcagtcatca
tcaggtcggtcggggaaaacaacggcaagatcccgtctgtatgagatctgtgctgcgaac
cattggaatcgcccttcatttgattgtatgaatgaggaaggaccaagccatttaaagatg
tttacttacaaggttggattagagattgaagaaacccctgatacgatttttgagttcttc
ggagcacctcatttgaaaaagaaagctgcagccgagcatgcggccgaagcagctctttgg
tacctgaagaagggaggatacttggctgggacagactga |