KEGG   Cucumis melo (muskmelon): 103487375
Entry
103487375         CDS       T03195                                 
Name
(RefSeq) dicer-like protein 4 isoform X1
  KO
K11592  endoribonuclease Dicer [EC:3.1.26.-]
Organism
cmo  Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cmo03036]
    103487375
Chromosome and associated proteins [BR:cmo03036]
 Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    103487375
   microRNA pathway
    RISC loading complex
     103487375
SSDB
Motif
Pfam: Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer DEAD Helicase_C ResIII DND1_DSRM dsrm PAZ Cas3-like_C_2 IstB_IS21 DUF930 SLFN-g3_helicase
Other DBs
NCBI-GeneID: 103487375
NCBI-ProteinID: XP_008443888
UniProt: A0A1S3B9W6
LinkDB
Position
2:complement(14055254..14073546)
AA seq 1652 aa
MMPDGETNSTTEVSENFRPTSFVPVERLMGPSLMNDRDAGSSTSTSEKDPRRIARKYQLE
LCKKALEENIIVYLGTGCGKTHIAILLIYELRHLIRRSQNGICVFLAPTVALVQQQAKVI
EDSIDFKVRVYCGGSKSLNSHYDWEREMEEYEVFVMTPEIFLRNLYHCYIKMDCVELLIF
DECHHAQVKSDHSYAEIMRVFYKTDDPKRPRIFGMTASPVVGKGACNQQNLSRSINSLEK
LLDAKVYSVEDREELHAFVSSPIVNIYYYGPVANGSSSSFMSYCSRLEDVKRKCIVALGQ
VEGEHEVLLATKKLLFRMHENILFCLESLGVWGAWQASKILLSGDNSERSELIEEAERNP
RNDSLSDRYLNQAAEIFASGCKEDGGISDMLNVDFLEEPFFSKKLLRLIGILSSFRQQLN
MKCIIFVNRIVIARSLSYILQNLKFLAYWKCDFLVGVHSKLRSMSRKTMNHILTKFRSGE
LNLLIATKVGEEGLDIQTCCLVIRFDLPETVSSFIQSRGRARMPQSEYAFLVDSGNEKEL
GLINEFRKDENRMNREISSRSSNETFHSHEESIYRVASTGASITSGRSISLLHEYCSKLP
HDEYFDPKPKFFYFDDLGGTVCHVNLPSNAPIPQVVSSPQSSRDAAKKDACLKAVEELHK
LGALSDYLLPMRGRGSANEQESELNSSDSDSSEDERSRRELHEMIFPAALKESWTGSGYL
VLYCYHIKCTPDPRDRNYKEFGLFVKAPLPQEAERMDLELHLARGRSVMVNLMPSGVVEL
LEEEITQAESFQEMFLKVILDRSEFVQEYIALRNNSSRSVSSTSYLLLPMIFHDNEGSLF
IDWNVIRRCLSSQIFQNHACSIVKGTASSDTHLMLYDGRRSSSDIENSLVYVPYKGEFFF
VTNIERGKNGHSQYKNSGFSSHFEHLKTKFGIHLNHPEQPLLRAKPLFLLHNLLHNRKRE
DSEAHHLEEYFIDLPPEVCQLKIIGFSKDIGSSISLLPSIMHRLENLLVAIELKCRLAAA
FPAGAEVTANRILEALTTEKCQERISLERLEILGDSFLKFVVARYLFLTHDKFDEGELTR
RRSYLVKNFNLLKLATRKNLQVYIRDQPFEPSQFYLLGRPCPRICNEETRKDIHSHDEAR
NNGKVNETKCSKGHHWLQKKTISDVVEALVGAFLVDSGFKAAIAFLKWIGIRVEFEASLV
TNALMASNGYVLLADSIDISALQNSLGHQFLHKGLLLQALIHPSYHKHGGGCYQRLEFLG
DAVLDYLITSYLYSAYPKLKPGQLTDLRSVFVRNEAFANVAVDRFFYKFLLCDSTSLLSD
IKSYVHFIKAPPSERDSREQPRCPKALGDLVESSVGAVLVDTGFDMNCVWKIMLSFMDPI
MNFSGFQLSPIRDITEFCQNCGWKLKFNSSKMEGYYSVKAEVKGGNFHAAASAANRRKKD
AEKIAANLILTKLKAKGFIPEVNSLEEILKSSKKMEPKLIGYDETPSVMIDQVDNGLRTS
NVPEFSSENSDPRMHYEVDNSHPVRITRISKMLVSSSRTAGEQLKLAFEGHDSPTDLQSS
SGRSGKTTARSRLYEICAANHWNRPSFDCMNEEGPSHLKMFTYKVGLEIEETPDTIFEFF
GAPHLKKKAAAEHAAEAALWYLKKGGYLAGTD
NT seq 4959 nt   +upstreamnt  +downstreamnt
atgatgcctgatggcgagaccaattctacgactgaggtcagcgaaaattttcgacccact
agttttgtgccggtcgagagattaatgggtccgtctctgatgaatgatcgggatgcgggt
tcaagtacaagtacatcagagaaagatcccaggagaatcgcaaggaaatatcaattggag
ctgtgcaagaaagctttggaagagaatatcattgtgtatctcgggacaggctgcggcaag
actcacattgctatactcctgatatacgagttgaggcacttaatcaggaggtcccagaat
ggtatctgtgtgtttctggctcctacagttgctttagttcaacagcaagcaaaagttata
gaagactccatagatttcaaagtcagggtctactgtggaggttccaaaagcttgaatagt
cattatgactgggaaagagagatggaagaatatgaggtttttgtcatgacccctgaaata
tttctgcgtaatttataccactgctatatcaagatggattgtgttgagcttctaatattt
gacgagtgtcatcatgctcaagtcaaaagtgaccattcttatgcagaaatcatgagagtg
ttctataaaacagatgatcctaaacggcctcggatttttggtatgactgcatctccagtt
gtaggaaaaggtgcttgtaatcagcaaaatttatctagaagcatcaatagtctcgagaag
ttacttgatgcaaaggtttattcagttgaagatagggaagaactgcatgcatttgtgtca
tcaccaattgttaacatatattattatggtcctgttgcgaatgggtcttctagctccttt
atgtcctactgttccagacttgaggacgttaaacgcaagtgcatagtggctcttggtcag
gttgaaggtgagcatgaagttctgctggccaccaagaaattgttgttcagaatgcatgaa
aatatcttattttgtttggaaagccttggtgtttggggggcatggcaggctagtaaaatt
ctccttagtggagataactctgagcgaagtgaattgatagaggaagcagagagaaaccca
agaaatgactctttaagtgataggtaccttaatcaagctgctgaaatttttgcatcaggt
tgcaaggaagatggtggaatctcagatatgttaaatgttgattttttagaggaacccttt
ttctcaaagaagcttctacgacttattggaattctttcttccttcaggcaacaactcaat
atgaaatgtataatttttgtgaatagaatagttatagctcggtccttgtcatacatactt
cagaatctaaaatttttggcatattggaagtgtgattttcttgttggtgtacactcaaaa
ttgaggagcatgtcaaggaagaccatgaaccatattcttacaaaattccgatcaggggag
ctaaacctcttgatcgctacaaaggttggtgaagaagggcttgatattcagacttgctgt
cttgtcatacgatttgatcttcctgaaacagtatctagctttatccaatcaagaggtcga
gcacgaatgcctcagtctgaatatgcattccttgttgatagtgggaatgaaaaggagcta
ggattgataaacgaatttcgaaaagatgaaaatcggatgaacagagaaatttcttcacgc
tcatccaatgagacatttcatagtcatgaagaaagcatctatagagtggcttcaactggt
gcatctattacatctggacgtagtatatccttactgcatgaatattgctcaaaacttcca
catgacgagtacttcgaccccaagccgaagtttttctattttgatgatttaggagggact
gtatgtcatgtaaatctaccctccaatgcaccgatcccccaagttgtcagcagcccacaa
tcttctagggatgctgctaaaaaggatgcttgtctaaaagctgtagaggaattgcataaa
cttggtgctctcagtgactatctcttgcccatgagaggcagaggcagtgccaatgaacag
gaatcagaacttaactcctccgattctgacagctctgaagatgagagatcgcgtcgagaa
cttcacgagatgatatttcctgctgctctaaaagagtcttggactggttctggatatctt
gttctttactgttaccatataaaatgtactccagatcctagagatagaaactacaaagaa
ttcggtttatttgtgaaggcaccattaccccaggaggctgagagaatggaccttgagctt
catcttgcacgtggaagatctgtaatggtaaatttaatgccatcaggggttgtggagctt
ttggaggaggagattacccaggcagagagttttcaggagatgtttcttaaggtcatttta
gacagatcagaatttgttcaggagtacattgctttgaggaataattcttctagatctgtt
tcatcaacatcttacttgttgcttcctatgatttttcatgataatgagggatcacttttc
atagattggaatgttattagaagatgtttgtcctcccaaattttccagaatcatgcatgc
tctattgtcaagggaactgcttcctcggatacccacctgatgctttatgatggccgtaga
tcgtcaagtgatattgagaatagtttagtgtatgtcccctacaagggtgaattctttttt
gttactaacatcgagagggggaagaatggacacagtcaatacaagaactcaggcttctca
agtcattttgaacatttgaagacaaagtttggcattcatcttaaccaccctgagcagcct
cttcttcgtgcaaaacctctgttccttttgcacaacttgcttcataatagaaagcgggaa
gattctgaagcacatcatctggaagaatattttattgatttgcctcccgaggtttgtcag
ttgaaaataatcggattttcgaaagatattggaagctccatatctttgttgccatcaatt
atgcatcgtctggaaaatttgcttgttgccattgaattgaagtgtaggctagcagctgct
tttccagcgggtgctgaggttactgctaacagaattctggaagcactcaccactgagaag
tgccaggaacgcatttccctggaaaggcttgaaatacttggtgattcattccttaaattt
gtagtagcaaggtacctttttcttacccatgacaagttcgacgaaggagaacttacaaga
agacgttcttatttggtgaaaaatttcaatttgctcaagctagcaactagaaagaattta
caggtatatatacgtgaccagccatttgaacctagtcaattttatttacttggtcgtcct
tgcccaagaatttgtaatgaggaaactagaaaagatatccattctcacgatgaagcaaga
aataatggaaaagtcaacgagaccaagtgcagcaaaggccatcattggttacaaaagaaa
acgatcagcgatgtggttgaagctctggtaggagcattcctagttgacagtggcttcaaa
gctgcaattgcatttctcaaatggatcgggatacgagtagaatttgaagcttcactagtt
accaatgctctcatggcaagcaatggttacgtcctacttgcagatagtatagacatttct
gcacttcaaaattcattaggccatcagtttctccataaaggtctgctgcttcaggcactc
attcatccatcttaccacaagcatggaggaggttgttaccagagattagagtttcttgga
gatgctgtcctggattacttgatcacatcatatctatattcagcgtatcctaaactgaag
ccaggtcaattgacagatttgagatcagtgtttgtgaggaatgaggcttttgccaatgtt
gccgtagatagattcttctacaagtttctgctttgtgattctactagccttctaagtgat
ataaaaagttatgtgcacttcattaaagcacctccttctgaaagggattcacgtgagcag
ccgagatgtccaaaggctttgggagacttggttgaatctagtgttggggccgttcttgtt
gatacagggtttgacatgaactgtgtttggaagataatgttatcttttatggatcccatc
atgaacttttcaggcttccagcttagtcctattcgggacataacagaattttgtcaaaat
tgtggctggaaactaaagtttaattcatcaaaaatggaaggatattattcagtcaaagca
gaggtgaaaggaggcaactttcatgccgctgcttctgcagccaaccgtcgaaagaaagat
gccgagaaaattgctgcgaacttaatactcacaaagctgaaggccaaaggattcatacct
gaggtcaattcattagaagagatcttaaagtcgagcaagaagatggaacctaagttgatt
ggttatgatgaaacaccctcggtcatgattgatcaagttgacaatggtcttagaacatca
aatgtgccagaattttctagtgaaaactcagatcctcgcatgcactatgaagttgacaat
tctcatccagtacgcattacacggataagcaaaatgttggtttcttcatctcgaactgca
ggggaacaactaaagctggcctttgaaggtcacgatagtccaacagacttgcagtcatca
tcaggtcggtcggggaaaacaacggcaagatcccgtctgtatgagatctgtgctgcgaac
cattggaatcgcccttcatttgattgtatgaatgaggaaggaccaagccatttaaagatg
tttacttacaaggttggattagagattgaagaaacccctgatacgatttttgagttcttc
ggagcacctcatttgaaaaagaaagctgcagccgagcatgcggccgaagcagctctttgg
tacctgaagaagggaggatacttggctgggacagactga

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