Cucumis melo (muskmelon): 103487377
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Entry
103487377 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103487377 isoform X1
KO
K24755
WD repeat-containing protein 76
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cmo04121
]
103487377
03036 Chromosome and associated proteins [BR:
cmo03036
]
103487377
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103487377
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103487377
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
103487377
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
103487377
DSBR (double strand breaks repair)
Other DSBR factors
Others
103487377
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
103487377
NCBI-ProteinID:
XP_008443893
UniProt:
A0A1S3B9V4
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All DBs
Position
2:14046452..14064246
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AA seq
543 aa
AA seq
DB search
MASQALTDYERQRLENIRRNDEMMAALKLQSKASELSAASKRQRVETKSEKVYPKTKPKN
ETPMVLRRSLRARGIPPDAKKLVDIDDLTESATKIRKSEIKSKSSPRFLGPLEMIEVCSE
RESHPSLIESLLGALSKSLLSRSGKEELVDDVKDFKLEEGNGNFPNEVKIEGGGDGNCLK
MEPIDNYSNLIKRETEELISDVKDPLMSSIKMEHKNDGSCLKPASLVLNADNIARVVPGR
IMAVRFFPCLDSRMIVVGNKFGEVGFWNADHEGEEGNGVYLYHPHSGPISGISIQRHALS
KVYTSCYDGFIRLMDVEKEIFDLVYRNEDTIYSLAQQSNDANCLYFSEGRGGLNIWDKRT
GNCPMEWTLHEDRINSIDFNVENSNIMATSSSDGTACIWDLRSVSDEKPQTLKMITHKRA
IHSAYFSPSGRFLATTSFDDTVGIYGGVNFKDTSLIPHDNQTGRWISSFRAIWGWDDLYI
FIGNMKRAVDVISRAYQKRVFVLQSPNISAIPCRFDAHPYDVGTLAGATSGGQVYMWRMS
QDI
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggcttctcaagctctcactgattacgagcgccaaaggctcgagaacattcgccgcaac
gatgaaatgatggccgctctcaagctccaatccaaagcttctgaactctccgctgcttcc
aagcgtcaaagagttgaaaccaaatcggaaaaggtttatccgaaaaccaaacctaaaaac
gagactccgatggttttacgacgctctttgcgcgctagaggaattccccccgatgccaaa
aagcttgtagatatagatgatcttacggagtcagctactaagattcggaagtcagaaatc
aagtccaagtcttcgcctcgttttttaggcccccttgaaatgattgaagtctgtagtgag
agggagtctcatccgtctttgattgaatctcttttgggtgctttgagtaagtctctgttg
agtaggtcagggaaagaggaattagttgatgacgttaaggattttaaattggaggaaggg
aatgggaatttcccgaatgaggtaaagatcgaaggagggggagatgggaattgtttgaag
atggagcctattgataattattcgaatttaattaagagggagactgaagaacttatcagt
gacgttaaagatcccttgatgagttcgattaaaatggaacataagaatgatggaagttgc
ttaaagcctgcatctttggttcttaacgccgacaacatagctcgggttgtgcctgggaga
ataatggccgtgaggtttttcccttgtcttgattctagaatgattgttgttggtaacaag
tttggggaagtcgggttctggaatgctgatcacgagggtgaggaaggaaatggagtttat
ttatatcacccccattcgggtcccatttctgggatttcaattcaacgacatgcattgtcg
aaggtttataccagctgctatgatggatttatacgattgatggacgtagagaaagagata
tttgatcttgtatatcgtaatgaagatactatatattctctagctcaacaatcaaatgat
gcaaactgcttatatttttctgagggtcgtggagggttgaatatatgggataaaaggact
ggaaactgcccaatggaatggacgttgcatgaagataggatcaattccatcgattttaat
gtagaaaatagcaacattatggctactagttccagtgatggaactgcctgtatttgggat
ttgagaagtgttagtgatgaaaagccccaaaccttgaagatgatcacccataaaagggcg
attcattctgcttacttctcgccctctggacgcttccttgcaactactagttttgacgac
actgttggtatatatggtggagttaactttaaagatacttcgctcataccgcatgataat
cagacaggcagatggatttcttctttcagagcaatatggggttgggatgacttgtatatt
tttatcggtaatatgaagagagcagtagatgttatttcacgggcatatcagaagagagtg
ttcgttttgcagagccccaacatatcggcaataccgtgcaggttcgatgcacatccttat
gatgttggaacattagcaggagccactagtgggggacaggtttatatgtggagaatgagt
caagatatataa
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