KEGG   Cucumis melo (muskmelon): 103487609
Entry
103487609         CDS       T03195                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03030  DNA replication
cmo03410  Base excision repair
cmo03420  Nucleotide excision repair
cmo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103487609
   03410 Base excision repair
    103487609
   03420 Nucleotide excision repair
    103487609
   03430 Mismatch repair
    103487609
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmo03032]
    103487609
   03036 Chromosome and associated proteins [BR:cmo03036]
    103487609
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103487609
DNA replication proteins [BR:cmo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103487609
  DNA Replication Termination Factors
   ELG1-RFC complex
    103487609
Chromosome and associated proteins [BR:cmo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103487609
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103487609
  Check point factors
   HRAD17(Rad24)-RFC complex
    103487609
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N AAA_16 Mg_chelatase AAA_11 AAA_5 AAA_24 AAA_assoc_2 AAA_14 SLFN-g3_helicase nSTAND3 AAA_2 ResIII AAA_19 DUF3853 AAA_18 AAA_7 AAA_28 AAA_30 TIP49 Ribosomal_L5_C NPHP3_N bpMoxR AAA_25 RNA_helicase DUF815
Other DBs
NCBI-GeneID: 103487609
NCBI-ProteinID: XP_008444196
UniProt: A0A1S3B9T6
LinkDB
Position
7:complement(7581355..7587011)
AA seq 336 aa
MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII
PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC
KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcgccattgttgcagagctctcaaccatgggtggaaaaatatcgaccgaagcaagtg
aaagatgtagcgcatcaggatgaggtggttcgggtcctcaccaacactctcgagactgcc
agttgtccacatatgctgttctatggaccgcctggtactggaaaaaccaccactgctctt
gcgatttcccatcaattattcggtcctgaactttacaagtctagagttttggagttgaat
gcaagtgatgaccgcgggatcaatgttgttcggactaagattaaagattttgctggtgtt
gcagtaagcagtggccaacgccaagggggttatccttgtccacccttcaagataatcatt
ctggatgaggctgattcaatgactgaagatgctcagaatgccttgaggcgtaccatggaa
acacactccaaagtgacacgattcttttttatttgcaactatatcagcaggattatagag
ccccttgcatctaggtgtgcaaagtttaggtttaagccactttctgaagaggttatgagt
aagcgtatattgcacatcagcaatgaagaaggtcttagtctagacggagaggctctttca
accttaagttcaatctctcaaggtgacctccgtcgagctatcacatatttacagtcagct
gcacgcttatttggatcatcaatctcttcaaaggatttggttaacgtgtctgggattatc
cctcgggaggttgttgatgcactttttactgcttgtaaaagtggtaacttcgatactgca
aacaaggaagtcaacaatgtacttgcagaaggatatccagtggctcaaatgctttcacag
atatttgaagtggtgattgaagacaatgatttgcaagatgagcagaaggccaggatatgc
aagaagttggccgaagctgacaagtgtctcgttgatggtgcggatgaatatttgcaactg
ctcgatgtggtaagtcaaacaatgcaagctttaagaagtatgcaactgtag

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