Cucumis melo (muskmelon): 103487609
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Entry
103487609 CDS
T03195
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03030
DNA replication
cmo03410
Base excision repair
cmo03420
Nucleotide excision repair
cmo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103487609
03410 Base excision repair
103487609
03420 Nucleotide excision repair
103487609
03430 Mismatch repair
103487609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmo03032
]
103487609
03036 Chromosome and associated proteins [BR:
cmo03036
]
103487609
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103487609
DNA replication proteins [BR:
cmo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103487609
DNA Replication Termination Factors
ELG1-RFC complex
103487609
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
103487609
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103487609
Check point factors
HRAD17(Rad24)-RFC complex
103487609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
Mg_chelatase
AAA_11
AAA_5
AAA_24
AAA_assoc_2
AAA_14
SLFN-g3_helicase
nSTAND3
AAA_2
ResIII
AAA_19
DUF3853
AAA_18
AAA_7
AAA_28
AAA_30
TIP49
Ribosomal_L5_C
NPHP3_N
bpMoxR
AAA_25
RNA_helicase
DUF815
Motif
Other DBs
NCBI-GeneID:
103487609
NCBI-ProteinID:
XP_008444196
UniProt:
A0A1S3B9T6
LinkDB
All DBs
Position
7:complement(7581355..7587011)
Genome browser
AA seq
336 aa
AA seq
DB search
MAPLLQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETASCPHMLFYGPPGTGKTTTAL
AISHQLFGPELYKSRVLELNASDDRGINVVRTKIKDFAGVAVSSGQRQGGYPCPPFKIII
LDEADSMTEDAQNALRRTMETHSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEEVMS
KRILHISNEEGLSLDGEALSTLSSISQGDLRRAITYLQSAARLFGSSISSKDLVNVSGII
PREVVDALFTACKSGNFDTANKEVNNVLAEGYPVAQMLSQIFEVVIEDNDLQDEQKARIC
KKLAEADKCLVDGADEYLQLLDVVSQTMQALRSMQL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgccattgttgcagagctctcaaccatgggtggaaaaatatcgaccgaagcaagtg
aaagatgtagcgcatcaggatgaggtggttcgggtcctcaccaacactctcgagactgcc
agttgtccacatatgctgttctatggaccgcctggtactggaaaaaccaccactgctctt
gcgatttcccatcaattattcggtcctgaactttacaagtctagagttttggagttgaat
gcaagtgatgaccgcgggatcaatgttgttcggactaagattaaagattttgctggtgtt
gcagtaagcagtggccaacgccaagggggttatccttgtccacccttcaagataatcatt
ctggatgaggctgattcaatgactgaagatgctcagaatgccttgaggcgtaccatggaa
acacactccaaagtgacacgattcttttttatttgcaactatatcagcaggattatagag
ccccttgcatctaggtgtgcaaagtttaggtttaagccactttctgaagaggttatgagt
aagcgtatattgcacatcagcaatgaagaaggtcttagtctagacggagaggctctttca
accttaagttcaatctctcaaggtgacctccgtcgagctatcacatatttacagtcagct
gcacgcttatttggatcatcaatctcttcaaaggatttggttaacgtgtctgggattatc
cctcgggaggttgttgatgcactttttactgcttgtaaaagtggtaacttcgatactgca
aacaaggaagtcaacaatgtacttgcagaaggatatccagtggctcaaatgctttcacag
atatttgaagtggtgattgaagacaatgatttgcaagatgagcagaaggccaggatatgc
aagaagttggccgaagctgacaagtgtctcgttgatggtgcggatgaatatttgcaactg
ctcgatgtggtaagtcaaacaatgcaagctttaagaagtatgcaactgtag
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integrated database retrieval system