Cucumis melo (muskmelon): 103487874
Help
Entry
103487874 CDS
T03195
Name
(RefSeq) transcription factor SPATULA-like
KO
K28361
transcription factor SPT/ALC
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103487874
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cmo03000
]
103487874
Transcription factors [BR:
cmo03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103487874
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
Motif
Other DBs
NCBI-GeneID:
103487874
NCBI-ProteinID:
XP_008444604
UniProt:
A0A1S3BA80
LinkDB
All DBs
Position
3:complement(29770751..29774211)
Genome browser
AA seq
379 aa
AA seq
DB search
MADLYGTSPSSDVVGLPHDPEDFSSFINHHLQTTTSSTSSPSCVSFKNKFMPLLHSQPPW
HSSPMFSRRPDSTSVPGMSCMLDFPEDRLHSSRVLNHALSDCSVRDVRFADASYLAVNST
CGGVKLSDPGDFVKESSDNAFSSSGAVDSDTNAPLKRRGLSSENDLGDFSCDSEGGDLPE
VPSSTDLPRNSSKRSRSAEVHNMSEKRRRRRINEKMKALQNLIPNSNKTDKASMLDEAIE
YLKQLQLQVQMLSMRNGLSLQPMCLPGVLQPIQLPQMGLDFDVGNAFLTSRRGIDTSSTR
NEGCPMQSTFNLTNKCNLSDQSIAIPSVPNTTTSETAFGFEPTIQGYNGEFNLSSDFKDG
EHAAQLDCTRTGKESTDAS
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcggatctctacggaacttccccttcttccgatgttgtgggtttgccccatgaccct
gaagatttctcttctttcattaatcaccaccttcaaaccactacttcttctacttcttcc
ccttcttgtgtttccttcaagaacaagttcatgcccttgttgcattctcaacctccttgg
cactcttcgccgatgttttctcgccggccggattccacctctgttcccggtatgtcctgc
atgctcgattttccagaggatcggcttcactccagtcgtgttttgaaccacgctttgtcg
gattgtagtgttagggatgtgagatttgctgatgcttcgtatttagctgtgaactcaact
tgcggcggcgtgaaattgtcggatcctggtgattttgtcaaagaaagttccgacaacgcc
ttttcttcctccggcgctgttgattccgatacgaatgcaccgttgaagagaaggggtctt
tcgtctgaaaatgatctcggggatttcagttgcgatagcgagggtggggatttgcctgaa
gttccatccagtactgatctgcctcgaaattcatcaaagagaagtagaagcgctgaggtc
cataatatgtcggagaagagacgaagaaggaggatcaatgagaaaatgaaagcccttcag
aacttaattcccaattcaaacaagacggacaaagcttcaatgttggatgaagcaattgag
tatttgaagcagcttcaacttcaagtccagatgttatcaatgagaaatggcttgagtttg
caaccaatgtgcttgccaggagtgctgcagccaattcaactacctcagatggggttggac
tttgacgtaggaaatgcatttctaacatcccgaagaggaatagacacatcgtctactagg
aacgaaggatgtcccatgcaatctacattcaatcttaccaacaaatgtaacctttcagat
cagtcaattgccatcccttctgtgccaaacaccacaacctcagaaactgcatttggtttt
gaacccacgattcagggttacaatggggagtttaacctttcctccgatttcaaggatggc
gaacacgccgcacagttagactgcactcgaacggggaaggagtcaactgacgcttcttag
DBGET
integrated database retrieval system
