Cucumis melo (muskmelon): 103488161
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Entry
103488161 CDS
T03195
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103488161
Transcription machinery [BR:
cmo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103488161
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
103488161
NCBI-ProteinID:
XP_008444981
UniProt:
A0A1S3BBM8
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Position
3:complement(27855173..27859668)
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AA seq
560 aa
AA seq
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MMGTCFRPNLKWGFQIQTHSLKNSPSKLSPYASKGREAAFNSGRLSFFSSICEEGESIPR
ETLKTYTCLSEAPQTSPDDLLNLEEIEMNSGAKSLSSLHYGIKSTRPSKVEDNFSSPTSM
PTGKASPFGILMENLDVLEETFAESGMLSLERDIVLQLTKLGALEFFNTCLSRTLKTSSF
HDLSDLPVEDGEDHNVNQKTNDQNCDVTVYSGKRAGRRSVKKRAMDNADKVASRPLATRA
VKEKIHSSTIFSRKKSSNSSKRRLVVARNEAEMSTGIKVVANLERIRETLEKESGRIASM
SCWAEAASVDIKDLQKQLQFGWFCRDELLRSTNSLVLFLAKKYRCSGLPMEDLVQAGALG
VLQGVERFDPKRGFRFSTYIQYWIRKSMSRVVARNSRGIQIPWSLTKAINQIQKARKVLN
QGGRRYSDDDIARATGLPLAKVRVASNCLKVVGSVDQKMGDGLNMKYMEFTADTSIQSPE
ETVKRKLMKKDIFNILQGLESRERQVLVLRYGLMDFQPKSLEEIGKLLHVSKEWVRKIEK
KAMTKLKNEETVKNLSHYLD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgatgggaacatgttttaggccaaatctcaagtggggttttcaaattcagactcattcc
ctcaagaattccccttccaagctttccccatatgcctctaaaggcagggaagccgccttt
aattcaggaagactttccttcttctcaagtatttgtgaagaaggagaatctatacctaga
gaaaccttgaaaacatacacttgcttgtctgaagctccacaaacctcgcccgatgatctg
ttaaatttggaagagattgagatgaacagtggggcaaagtcacttagttctttgcattat
gggattaaaagtaccaggccgtccaaggtagaggacaatttttcttcccctacgagcatg
cctactggcaaggcgtcaccttttggcatcttaatggaaaaccttgatgttttggaggaa
acttttgctgaatcaggcatgctcagcttggaaagagatattgtgctgcaactaacgaaa
cttggagctttggagttttttaatacctgtctatctaggactcttaaaacttcaagtttt
catgatttgtcagacttacccgttgaggatggtgaagatcataatgtaaaccagaaaact
aatgaccagaattgcgatgtcacagtttactctggaaaaagagcaggaagaagatcagta
aaaaagagagcaatggataatgctgataaagttgcttccaggccgctggctacaagagct
gttaaagaaaaaatccacagttcgactatattttcgagaaaaaaatcatctaattctagt
aaaagaagactggttgttgcaagaaatgaagctgaaatgtccacagggattaaggtagtt
gcaaatttagaaagaattagagaaaccttagaaaaggaatctggaagaatagcaagcatg
agttgttgggccgaagctgccagcgttgatataaaagacctgcagaaacagttacaattt
ggttggttctgccgggatgagcttttaaggagcactaattcattagttctgttccttgca
aagaaataccgatgctctgggttaccaatggaggacttggttcaggcaggagcccttggt
gtgctgcaaggtgttgaaaggtttgaccctaaaaggggttttagattctcaacgtatatt
caatactggataaggaaatcaatgtcaagagttgtggcacgaaattcaaggggaattcaa
attccatggtcattaaccaaggcaataaatcagatacaaaaagcgcgaaaagtgttgaac
caaggtggtaggagatattccgacgacgatatagcaagggctactggacttcctctagcc
aaggttagagttgccagcaactgtttaaaagttgtgggttcggttgatcagaagatgggt
gatggactaaatatgaaatatatggaatttacagctgatacgtcaatacagagcccagaa
gagactgtgaagcgaaaactgatgaagaaagacatctttaatattcttcaagggttggaa
tcaagggagaggcaggtcctggtgctgcgttacggacttatggatttccagcccaagtcg
ctggaggaaattggaaaacttctgcacgtaagcaaggaatgggttcgaaaaatagaaaag
aaagccatgacaaagctgaagaatgaagagactgtgaagaacttgagccattacttggat
tga
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