Cucumis melo (muskmelon): 103488386
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Entry
103488386 CDS
T03195
Name
(RefSeq) RNA pseudouridine synthase 2, chloroplastic isoform X1
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cmo03009
]
103488386
Enzymes [BR:
cmo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
103488386
Ribosome biogenesis [BR:
cmo03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
103488386
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Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF7183
Motif
Other DBs
NCBI-GeneID:
103488386
NCBI-ProteinID:
XP_008445318
UniProt:
A0A1S3BCE4
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Position
3:26205843..26210607
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AA seq
431 aa
AA seq
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MISVCSARTIQASPSSIHFFFPRNRRRIDSNVLRFSANFSSRCSDYDEYSEAQSERIANY
AGTRLEETVDINPGKVRLDSWISSRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAG
DVINCTISELQPLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNH
CSLPMVSTSTGEHQSDSDVSDDEFSSIEVFSRVSEAPIRPGIVHRLDKGTSGLLVVAKDE
HSHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEIPICRDPNNRIRMTATHGTKNNPHA
KHAASRYNVMEILAQGGSSLVEWRLETGRTHQIRAHAKYMGIPLLGDEVYGGTKSMAMSL
LRTRASSNCHGQLMQLVSSLERPCLHALTLGFVHPHTGKNIRFSCPPPTDFAEILSQLRE
IGTKKLQVTKS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgtttgctccgctcgaacaattcaagcttcaccttcttctattcacttcttt
ttccctcgaaatcgtaggagaatcgattcaaatgttcttcgattttccgccaatttctcc
agtagatgctccgattacgatgaatatagtgaagctcaatccgaacggatagccaattac
gccggaaccagactggaagagaccgtggacatcaatcccggtaaagttcgtctcgattct
tggatatcttcccgcattaacggtattagtagggctcgagttcagtccagtatcagagcg
ggattagtttcagttaatggccgagttatcgataaggtttctcacaatgtaaaagctggg
gatgtgatcaattgtaccatatccgagttgcaaccattgagagctgaacctgaagatatt
gatttggatatagtttatgaagatgaacatgttttagtcgtaaacaaacctgctcacatg
gttgttcatccagcacctggaaatgcgacgggaacactagtaaatgccattcttaaccac
tgcagtctcccgatggtttcaacatcaactggggaacatcagtcggattcggatgtttca
gatgatgagttcagttcaattgaagttttttctagagtttctgaggcgcctattcgtccc
ggtattgtgcataggttagataaaggaactagtgggttgcttgttgttgccaaggatgaa
cattcccatgctcacttatctgctcaattcaagcaacattctattgagagagtttatatt
agtctcacatgtggagttccaccctcaactgctgggcgtattgagataccaatttgccgt
gatccaaacaatcgtatccgcatgactgcaacacatggaacaaaaaataatccacatgca
aagcacgctgctagtagatacaatgttatggaaattttagcccaaggaggttcttcattg
gttgagtggagattagaaacaggccgcacgcatcagatacgtgcacatgcgaagtatatg
ggaataccgttacttggagacgaggtctatggaggtaccaagagcatggccatgtcgctg
cttcgaactagagcatcatctaattgtcacggccaactcatgcagcttgtttcttcatta
gagaggccctgtcttcatgctctgactcttgggtttgtacatcctcacacggggaagaac
atacgtttttcatgcccacccccaacagattttgctgaaattttgagtcagcttcgtgaa
attggcacaaaaaagttgcaggttaccaaatcttag
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