Cucumis melo (muskmelon): 103488431
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Entry
103488431 CDS
T03195
Name
(RefSeq) vacuolar protein sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103488431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103488431
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cmo04147
]
103488431
Membrane trafficking [BR:
cmo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
103488431
Exosome [BR:
cmo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103488431
Exosomal proteins of colorectal cancer cells
103488431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
PH_TFIIH
Peptidase_S32
HTH_10
Motif
Other DBs
NCBI-GeneID:
103488431
NCBI-ProteinID:
XP_008445381
UniProt:
A0A1S3BCK3
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Position
3:complement(25815860..25824998)
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AA seq
439 aa
AA seq
DB search
MADRFPPAAELTTSGRPVLIPNEIECSILSSVDLECDEIPSFPLLKSGIIILTTHRIVWI
SDSTNSAVAVPLAAVNHILSSKKGIKSMFASPRVRFQVSVPYGGSSRSAVITIVIRGKGD
HEVFVSKFWENWRARAWENDDNSKDSSSSSASGPSSTGSGGLYSSEGTVRMVGVAGILRK
EQEMWENTDKSLQEAFQDLNALMSKAKEMVMLAEKMRQKLLASTNSHSGSTNDDEVASKE
EIQDWLLSVGIISPVTKESAGALYHQQLSRQLADFVRTPLDIAGGMISLIDIYCLFNRAR
GTELISPDDLLQACLLWEKIDVPVMIRKFDSGVMVIQSKSYSDDEVFARIRTLVTKPDAL
QFGVSASDAARTLGIAPAMAKEHLLTAESKGLLCRDVSPEGFRFYINLFPEINSEDLYLV
KDYTVYASWIKATIGNRRK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccgcttcccgccggcagccgagctcaccaccagtggccgtccggtgctgatc
ccaaacgaaatcgaatgttcaattctctcctctgtcgacctcgagtgcgatgaaattccc
tcgttccctctcctgaagtctggcattatcatcctcaccactcatcgtatcgtctggatt
tctgactccaccaattccgcagttgcggtgcctctcgccgccgttaaccacatcctttcg
tccaagaagggcatcaagtcaatgttcgcctcgcccagggtccgtttccaggtatcggtt
ccctatggcgggagttcgagatcagctgtgatcacgattgtaattaggggaaagggggac
cacgaggtctttgtaagcaagttttgggagaactggagagccagggcgtgggagaatgat
gataatagtaaagattccagtagcagttctgcgtcggggccgagttctactggttctggt
ggattatattcgagtgaaggaacggtgaggatggttggagtagcgggaattctgaggaag
gagcaagagatgtgggagaatactgataagagtttacaagaagctttccaggatcttaat
gctttaatgagtaaagctaaggaaatggtaatgctagcagaaaaaatgagacaaaaactt
ttagccagtacaaattctcacagtggttcgacaaatgacgacgaagtagcttcaaaagaa
gaaattcaagattggctgttgagtgttggtatcatttcccctgtgacaaaagagtctgct
ggtgctctttatcatcagcagttgtctcgtcagctggctgattttgttcgaactccactt
gatatagccggtggaatgatcagtcttatagatatatactgcctattcaatcgtgctcga
ggaacagaattgatctcaccagatgatttgttgcaagcatgtttgctttgggagaagatt
gacgttcctgtaatgatccgtaaatttgacagtggagtcatggtaatccagagtaaatcc
tacagtgatgatgaggtttttgctagaataagaacgcttgtaacaaagcccgatgctctc
caattcggtgtcagtgccagtgatgctgcaaggactcttgggattgctccagctatggcc
aaggagcatcttttaacagcagagagtaaaggtttgctgtgtcgagatgtcagccctgag
gggttccggttttatattaacctatttcctgagattaactcagaagatttatatttggtt
aaagattatacagtttatgcttcatggatcaaggccactattggtaataggcggaaataa
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