Cucumis melo (muskmelon): 103488432
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Entry
103488432 CDS
T03195
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial isoform X1
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmo03032
]
103488432
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103488432
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
103488432
DNA replication proteins [BR:
cmo03032
]
Prokaryotic type
DNA Topoisomerases
103488432
DNA repair and recombination proteins [BR:
cmo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
103488432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
103488432
NCBI-ProteinID:
XP_008445382
UniProt:
A0A1S3BDB8
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Position
3:25786130..25814612
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AA seq
923 aa
AA seq
DB search
MASSSGLRISYLLRHQLAPPLVSNRFTRTCRGLSELRFLPTRNFTASRSLRLAKSGRRDE
LVKDEGEEGQDGNGSVAVKKDGGGSDGRIVHAALHKEATDAYMAYAMSVLLGRALPDVRD
GLKPVHRRILFAMHELGLSSRKPFKKCARVVGEVLGKFHPHGDTAVYDSLVRMAQDFSLR
SPLIQGHGNFGSVDADPPAAMRYTECRLEALSEAMLLSDLEMNTVDFVPNFDNSQKEPSL
LPARLPTLLLNGSSGIAVGMATNIPPHNLGEVVDALCVLIHNPEATLQELLEYMPGPDFP
TGGLIMGNNGILEAYRTGRGRITVRGKTEVELLDSKTKRTAVIIKEIPYQTNKSALVEKI
AELVENKTLDGISDIRDESDRTGMRIVIELKRGADPSIIQNNLYRLTSLQSSFSCNMVGI
INGQPKLMGLKELLQAFLDFRCSVVERRARFKLSQAQERRHIVEGIVIGLDNLDGVIRLI
REASSHSIASASLRTQFNLSEKQAEAVLDINLRRLTHLERKKFTDESKSLTENISKLEEL
LSSRKNILQLIEQEATELKNKFPSPRRSVLEDTDSGQLEDIDVIPNEEMLLALSEKGYVK
RMKPNTFSLQHRGTIGKSVGKLRVNDAMSDFIVCRAHDHVLYFSDKGIVYSARAYKIPEC
GRTAAGTPLVQILSLSDGERITSIIPVSEFNEDQFLLMLTAYGYIKKVSLNFFSSIRTTG
IIAIQLVSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTVRALGRNTRGAVAMRLKAGD
KMASMDIIPAAVWNDLERNSSKISNGPWLLFVSESGFGKRVPLSSFRLSPLRRVGLIGYK
FSSEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVNRIKVRDVSIQSRFARGVILMRLD
HAGKIQSASLISAADTEPEEEEA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcttcttctggactccgtatctcttacctacttcgccatcagctcgctccacct
ctcgtgtccaatcgtttcactagaacctgccgtgggttgtcagaacttcgctttttacct
accaggaattttacagcttccaggtccctgcggttggcgaaatccgggcgcagagacgag
cttgtgaaagatgaaggggaagaggggcaggatggaaatggtagtgtagccgtgaagaag
gatggaggtggtagtgatggaaggattgttcatgccgcgcttcacaaggaggctactgat
gcttacatggcttatgcaatgtccgtgttgctcggccgtgccttgccagatgttcgtgat
ggtttgaaacctgtccaccgccggattttgtttgccatgcatgaattgggcctttcatca
agaaaaccatttaagaaatgtgccagagttgttggagaggttttaggtaaatttcatccg
cacggagatactgctgtttatgattcccttgttagaatggcccaggatttctctttaagg
agcccactcatccaaggccatggaaattttggttcagttgatgcagatcctcctgctgcc
atgcgttatacagagtgcagattggaagcactttcagaagcaatgttgttgtctgactta
gagatgaatacggttgattttgttccaaattttgataattctcaaaaggaaccttcactt
ttgccggctcggctgccgactttgttgctgaatggttcctcagggattgcggttggaatg
gcaaccaatattccaccgcataatcttggtgaggtagtagatgcactctgcgttcttatt
cataatccagaggctacattgcaagaattgttggaatacatgcctggacctgactttccg
actggaggattaattatgggaaacaatggtattttagaggcatatcgaactggacgtgga
cgcattacagttagggggaaaactgaagttgaactactcgattctaaaacaaaacgaact
gctgttattataaaagagataccttaccaaacaaataaatctgccttggtggagaagata
gcggaacttgtggagaacaagacactagatggtataagtgacattcgggacgagagtgat
cggactggaatgcggattgtaattgagcttaagcgaggagcagacccatcgattattcag
aataatttatatcgtctcacatctcttcagtctagttttagctgcaatatggtgggtatc
attaatggacaacctaaactcatgggtctgaaggaattgttgcaggcatttttggacttc
cggtgttctgttgttgaaagacgtgcaaggtttaagctatcgcaggcacaagagagaaga
cacatcgtagagggtattgttatcggacttgataatttggatggagtgattcgtttgata
agggaagcttccagccattctattgcatctgctagtctgaggactcaattcaacctttct
gaaaaacaagctgaagctgtattggacattaaccttaggagacttacccacctcgagagg
aagaagtttactgatgaaagtaaatccttaacggagaatatttccaaattagaggagttg
ttgtctagcaggaagaacatactgcagttaatagaacaagaagcaactgagctgaaaaac
aagtttcctagccctaggcgttcagttttagaagacactgatagcggtcaacttgaagac
attgatgtcattccaaacgaagagatgcttttggcacttagtgaaaaaggatatgttaag
cggatgaaacccaacaccttcagtcttcagcatcgtgggacaattggaaaatctgttgga
aaactgagagtcaacgatgcaatgtcagactttattgtttgtcgtgcgcacgaccatgtt
ctgtatttcagtgataaaggtatagtctattcagctcgtgcatataaaattccggaatgt
ggccgaactgctgctggcactccattagttcagatcctatctttatcagatggagagaga
ataacctccataatccctgtgagcgaattcaatgaagaccagtttttactaatgctcacg
gcatatggttacatcaagaaagtatctttgaactttttttcatcaatcagaacaactgga
attatagccattcaattggtgagtggtgatgagctaaaatgggtccgccgttgcacaaat
gataatcttgtggcaatggcttcacagaatggaatggtcattttaagttcttgtgatact
gttcgggcactaggcagaaacaccaggggtgcagtggccatgagactaaaagctggggat
aagatggcaagcatggacataattccagctgcagtgtggaatgatttagaacgtaatagc
tccaagatctctaatggtccatggctcttatttgtgtctgaaagtggatttggaaagcga
gttccactgagcagtttccgcttgtctcctttaagaagagttggtctgattggatacaag
ttttcctcagaggatcgcttggcagctgtctttgtagttggattctcattggcagaggat
ggtgaaagtgatgaacaagtagttctagtaagccaaagtggtacagttaatagaatcaag
gttcgggatgtttctatacaatctcgttttgccaggggagttattttgatgaggttggat
catgctggaaagatccagtccgcttctttgatctcagctgcggacacagaacccgaggaa
gaagaagcttaa
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