KEGG   Cucumis melo (muskmelon): 103488797
Entry
103488797         CDS       T03195                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
cmo  Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cmo04812]
    103488797
Cytoskeleton proteins [BR:cmo04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     103488797
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EML Beta-prop_SCAP Beta-prop_TEP1_C Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_SPT8 WDR90_beta-prop_4th eIF2A Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_IP5PC_F Beta-prop_VPS8 Beta-prop_WDR19_1st PROPPIN VPS8_N Csm6_6H Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 103488797
NCBI-ProteinID: XP_008445914
UniProt: A0A1S3BDT8
LinkDB
Position
10:4970093..4979953
AA seq 869 aa
MTTKRAYKLQEFVAHSSAVNCLKIGRKSSRVLVTGGEDFKVNLWAIGKPNAILSLTGHTS
GIDSVSFDSSEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGS
LDTNLKIWDIRKKGCIHTYKGHTRGVNAIRFTPDGRWVVSGGEDNTVKLWDLTAGKLLHD
FKCHEGQVQCIDFHPHEFLLATGSADKTVKFWDLETFELIGSAGPETSGVRCLTFNPDGR
TLLCGLHESLKVFSWEPIRCHDGVEVGWSRLSDLSVHEGKLLGCSYNQSCVGVWVVDITR
TEPYAVNNANRLNGRSEPKSSSHLQNENNTKTGFCGLSVSQTSDPLLKETKTLGRLSVSQ
NSDVAKDPKSLSSTGNGPSTPQKINLNAGSKTNLVTSAAVPSAVVPKRNSVKATSTFNNP
IFNKSDVIPVIVPRTSSRHEQDDSRKEFDVAGRAGPISRTNSRHEQDDSRKEFDVAGRAV
TVSRTNSRHEQDDSRKEFDVAGRVMPLSRTNSRHEQDDSRKECDITGRTVPAPSLSKTTD
NRRFPNSRDEVDNSTISVLSESRGLKANDMSAIADNRNSLHGIGSFQGVSAPQKIVKEER
YIGSGKTETETKDTTANYKHEDESRGHKISRDSSFPEATKGGRLRSHVDWEKRERPNFSR
LTYNASPGRAAALENIPLNNGRGYRRSPEKETVSPASDEDTIANVLQQHDQFVNSMQSRS
AKLQAVYRHWERHDIKGAVSAMEKMADHAVAADVISIMTNRIEVVTLDICTCILPVLSGL
LESDLDRYLDISMEMLVKLVRTFGSVIYSTLSATSSVGVNIEAEQRLERCNLCFIELEKV
KRCLPALIRKRGSVAKSAQELNLALQEFQ
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgactaccaaacgggcgtacaagctacaagaatttgtggcacattcttccgctgtcaat
tgcctgaagattggaaggaagtcatcccgtgttcttgtcaccggaggggaagacttcaaa
gtcaatctctgggctattggtaaacccaatgccatactgagtttgactggccatacgagc
ggaatagattctgtaagctttgactcatcagaagtgttggtagctgcaggggctgctagt
ggcacaatcaagctttgggatttggaggaggccaaaattgttcgaacgcttactggtcat
agatccaattgcatttctgtggattttcatcccttcggggaattctttgcttctgggtct
ttggatacaaatcttaagatatgggacatcaggaagaaagggtgtatccacacatacaaa
ggtcacactcgaggagtcaatgcaatcagatttacaccagatggccgttgggttgtatct
ggtggagaagacaacacagtgaagctctgggatttaactgctggaaagttgttgcatgat
tttaagtgccacgagggtcaggttcaatgtatagactttcaccctcatgaatttttgcta
gcaacaggttcagcagataaaacagttaaattttgggacctggaaacctttgagttgatt
ggttccgctggacctgagaccagtggagtccgttgtttaacatttaatcctgatgggagg
acattgctttgcggattgcatgaaagtttgaaggttttctcatgggaaccaataagatgt
catgacggtgtggaagttggttggtctaggctgtctgatcttagtgttcatgaggggaaa
cttcttggttgttcgtacaatcagagctgtgttggagtgtgggttgtagatattacgcgg
acagagccctatgcagttaacaatgctaacagactaaatggccgatcagaacctaaatcc
agcagtcatctacaaaatgagaacaataccaagactggtttttgtggattgtcggtctca
caaacttctgatccactattaaaggagaccaaaacattgggaaggttgtcagtttctcaa
aattcagatgttgccaaggatccaaaatctttgtcgtccacaggaaatggaccaagtact
cctcaaaagatcaatttaaatgctggctcaaaaactaatttggttacctcagcagcagta
cctagtgcagtggtgccgaagagaaactctgtgaaggctacttcaacattcaacaatcca
atcttcaataagtcagatgtgatacctgtaatcgtacccaggacaagttcaaggcatgag
caggatgattctagaaaggagtttgatgttgctggaagagcaggccccatatcaaggaca
aattcaaggcatgagcaggatgattctagaaaggagtttgatgttgctggaagagcagtc
accgtatcaaggacaaattcaaggcatgagcaggatgattctagaaaagaatttgatgtt
gctggaagagtaatgccactgtccaggacaaattcaaggcacgagcaggatgattcaaga
aaggaatgcgacattactggaagaacagttccagcaccatcgctatcgaaaactaccgat
aacaggaggtttcccaatagtagagatgaagttgataattcaactatctctgtgctttct
gaatccagaggtctgaaggcaaatgacatgagcgccattgcagataataggaattccttg
catggcattggttcatttcaaggagtatctgctccacagaagattgtgaaagaagaaaga
tatattggatctggcaagactgaaacagaaacaaaagatacaacagcaaactacaagcac
gaagatgaatcaagaggccataaaataagcagggattcatcttttcctgaagctacaaaa
ggaggaagattgcgttcacatgtagattgggagaaaagagagagacctaattttagccgg
ctaacatataatgcctcccctggaagagcagctgcactggaaaatattccattaaataac
gggagaggatatcgtcgatctcctgagaaagaaacagtatcacctgcaagtgatgaggat
accatagcaaatgttctacaacaacacgatcaatttgtcaactcaatgcaatctcggtcg
gcaaaattgcaagcagtctatagacattgggaaagacatgacattaaaggagcggtttct
gcaatggagaaaatggctgatcatgcagttgctgccgatgtaattagtattatgaccaat
agaattgaagttgtcaccctggacatctgcacttgtattcttccagttctctctggcctc
cttgaaagtgacttggataggtatttagacatttctatggaaatgctagtgaagctggtg
aggacgtttggttcagtgatctattctacgttgtcggcaacatcatctgttggtgtaaac
attgaagcagagcaaaggttggagcgatgcaatctatgcttcatcgagctcgaaaaagtt
aagcgctgcctgccagcccttattagaaaaaggggatcagtagcaaagtcagcacaggag
ttgaatcttgcacttcaggaatttcaatga

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