Cucumis melo (muskmelon): 103488989
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Entry
103488989 CDS
T03195
Name
(RefSeq) polygalacturonase At1g48100
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo00040
Pentose and glucuronate interconversions
cmo01100
Metabolic pathways
Module
cmo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103488989
Enzymes [BR:
cmo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
103488989
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
GRP
Motif
Other DBs
NCBI-GeneID:
103488989
NCBI-ProteinID:
XP_008446184
UniProt:
A0A1S3BEF8
A0A9I9D2D2
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Position
10:3538295..3542323
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AA seq
466 aa
AA seq
DB search
MKQISKKLTFSLFLFLVVSLLVSSSVVRVEARKQYHKKSKHQKQKGDGNGHGSGPAPAPL
PYYNQSQSTIFNILSFGAKGNGVSDDSKALLAAWKAACEIPGATLEIPSQHKFLIKPITL
NGPCMAQLVLQIDGAVLAPPKVSSWPKSSLFQWLNFKWLHNFTVQGSGTVNGQGFNWWTL
STFYNNKKKLKHIPDMKPTALRFYSSYNVTVRDITIINSPQCHLKFDNSGAVKIDNITIS
SPENSPNTDGIHLQNTRDVEIQHSNIGCGDDCVSIQTGCSNIHIHHINCGPGHGISLGGL
GKDKSAACVSNIVVQNISIQNTLSGVRIKTWQGGIGSVKNVSFSNIQVSDVKVPIMIDQY
YCDKSKCKNQTGAVAISGITYDQIIGSYSVQPIHLACSSQIPCVDVDLIDIQLKPSSESR
GFQNSLCWNSYGKSQAPLLPTSIDSCLRRGGGAVRRIARSHDYVCY
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaataagcaagaagttaactttttcactgtttctgtttttggtagtctctttg
ctggtgtcttcatctgtagttagagtggaagcaagaaagcaatatcacaagaagagcaag
catcagaagcaaaagggtgatggcaatggccatggttcaggccctgcaccagctcccctt
ccgtattacaatcaatctcagtccaccatttttaatatcttgtcttttggagcaaagggc
aatggagtttctgatgattccaaggcacttctagcagcatggaaagctgcatgtgagatt
ccaggagctacgttggaaataccatcacagcacaagtttctcatcaaacccatcactcta
aatggcccttgtatggctcagcttgttcttcagattgatggagctgtattggcacctcca
aaagtaagttcgtggcccaaatccagcttgtttcaatggcttaatttcaaatggctacat
aacttcaccgttcaaggctctggtactgtcaatggccagggctttaattggtggactctc
tccacattctacaataacaaaaagaaattgaagcacattccagatatgaagcccactgct
ttgagattttattccagttataatgtgacagttcgtgacatcaccataataaacagtcca
cagtgccatctgaaatttgacaattccggcgccgtcaaaattgacaatatcaccatttct
tcgccggagaacagccccaacaccgacggcattcacctgcagaacactcgagatgttgag
attcaacactccaacattggctgtggagatgactgtgtttccattcagactggctgctcc
aacatccacattcatcatatcaattgtggccctggacatggcataagcttggggggactt
gggaaagataaaagtgctgcatgtgtctccaatattgttgtccaaaacatctcaattcaa
aacactctttcaggagtgagaatcaagacctggcagggaggaattgggtcagtgaagaat
gtatcattctcaaacatccaagtttctgatgtaaaggtgcctattatgatagaccaatac
tactgcgacaagtccaaatgtaagaaccaaacgggagcagttgcaatttcaggcataaca
tacgaccaaatcataggaagttactcagtacagcctattcatttagcctgcagcagccaa
atcccatgcgtagacgttgatctcattgacatacagctgaagccatcttcagaatccaga
ggctttcaaaactccttatgttggaattcttatggtaaatctcaagcccctcttcttcct
actagcatagactcttgccttagaaggggtggtggtgctgtaaggagaattgctagatcc
catgattatgtctgctactga
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