Cucumis melo (muskmelon): 103489012
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Entry
103489012 CDS
T03195
Name
(RefSeq) uncharacterized protein LOC103489012 isoform X1
KO
K12816
pre-mRNA-processing factor 17
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103489012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103489012
Spliceosome [BR:
cmo03041
]
Complex C
Other components
Step II factors
103489012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
103489012
NCBI-ProteinID:
XP_008446211
UniProt:
A0A1S3BFC4
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Position
10:complement(3414316..3417814)
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AA seq
581 aa
AA seq
DB search
MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP
IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME
EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctccagtcatatacagatcaaaacgacgatgacggaagccctaaacagctt
acatcttcaccagaagcgtctccgcctcgccttatcccctccaaaacctcggcgcctaag
gttgatgatacaatgttagccctcacggtggctaatgccaaccaaaccctctcgaagccg
atagacccaactcagcatcttgttgcgttcaaccccacttacgatcaactatgggcgccc
atttatggcccatctcatccctatgccaaggatggaattgcacagggaatgcggaaccac
aagctagggttcgtggagaatgcgtccattgaaccatttgttttcgatgagcagtacaac
acgttccataaatatggatatgctgctgacccatcagcttctgctggaaacaattacatt
ggggatatggaggctttgcagaagaatgatgccatttccgtgtataacattccacagcat
gagcaaaagaagcggaagattgagaaaaagaaagaaatgagtgagaatgaagatatggaa
gaggaggtgaacccggctgaagttgataatccagcttctgatgtgtggttgatgaagaat
aggaagagtccatggtctggaaagaaggaaggtctgcaaaccgagctaactgaagagcag
aagaaatatgcagaagagtatgcaaagaagaaaggtgaagagaaaggtggtgagaaggga
gaagttacggcggataagagtacttttcatggtaaagaggagagggactaccagggtaga
tcttggattgcacctccaaaggatgccaaggccacgaatgatcattgttatataccgaaa
agattggtgcatacatggagcgggcacacaaagggtgtatctgctattagattcttccct
aaacatggccatttaattctttcagctggtatggacaccaaagtgaagatatgggatgtg
ttcaattctggtaaatgtatgagaacctacatgggtcactctcaagcggttcgggacatt
tcattttgtaatgatggatctaagtttttgactgccggatatgataaaaagatcaagtat
tgggatacagaaacagggcaagtgatatcaaccttctctaccgggaaaattccttatgta
gttaagcttaatcctgatgatgataagcagaatatcttgctggcagggatgagtgataag
aaaatcgttcaatgggatatgaacacaggacagattacacaagagtatgatcaacattta
ggagcagtgaataccattacgtttgtagacaataataggaggtttgttacatcgagcgat
gacaagtctctccgtgtttgggaatttggaattcctgttgttattaagtatattagtgag
cctcacatgcattccatgccctctatttcagtacatcccaatacgaattggcttgcagca
cagagtttagacaatcaaattcttatttatagcactagggagagatttcagctaaacaag
aagaagaggtttgctgggcacattgtggcaggatatgcttgtcaggttaatttttctcca
gatggacgttttgttatgtcgggtgatggtgagggtaaatgctggttttgggactggaaa
acctgcaaggtattcagaactctcaagtgtcacgagggtgtatgcattgggtgtgagtgg
catccattggagcaaagtaaagtagcaacttgcggatgggatggactgataaagtattgg
gactag
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