Cucumis melo (muskmelon): 103489589
Help
Entry
103489589 CDS
T03195
Name
(RefSeq) SWI/SNF complex subunit SWI3D
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103489589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103489589
03036 Chromosome and associated proteins [BR:
cmo03036
]
103489589
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103489589
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103489589
PBAF complex
103489589
GBAF(ncBAF) complex
103489589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
ZZ
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103489589
NCBI-ProteinID:
XP_008447039
UniProt:
A0A1S3BH30
LinkDB
All DBs
Position
1:complement(18708737..18725486)
Genome browser
AA seq
1026 aa
AA seq
DB search
MEDKRRDTANIPSNTTDSSSSEPPSSRRRAGAHKRKASALGASNSLSAPSKRVTRDKSAL
SHPPNHNGPFTRARLGPNNVPGAASVNAAGGLAPGSVKADGSLLHSEVQRGDALVSAAEE
LSKATRLANLEASFEADFEAIKSRGAKVHVVPNHCGWFSWTKVHPIEERTLSTFFSGKVA
NRSPDIYIEIRNWIMKKFHANPSTQIESKDLSELEVGELDARQEVMEFLDHWGLINFHPF
PATDSISTNDVNDENQKDSLVEKLFHFETLESCPSVVPKINATTAAPPRLLRESAISEEI
VRPEGPSVEYHCNSCSGDCSRKRYHCQKRADFDLCSECFNNGKFDSDMSSSDFILMESAG
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE
GNVEVGGKETTVPPLIENDASVPSDITESVDNKATGKEASSVENVSKEDTGEVKVGQDNP
KSEDVEGKGSLVKSTSKDGDQKVSEDIALNALREAFEAIGYVLTPEHSLSFADVGNPVMA
LAAFLARLVGSDVASASARFSLKSISQKSPSLELATRHCFILEDPPDDKKAQDNLESVDN
VEAQKNDKEESAKQSEDNSTSVLDDRALSTNNSNNKSGESVTKETTENGNSSDAIREHNP
IINHGSDTSSNLKELGEKELLKDEKTGIVKESENLESKLTSNPVETSGEGTTVEKPLEST
LSSNDVHMSDLQHAEKSEIQKQVPPHSAKTSKEVDDETKRLSSGDEPQPISSANSVKEAS
NDVAMVSDSHDKNEARQTETSKSLVNQGPNKVSDSLPSEENASTEPVKPNSAVERRADDN
QSKDNKEENSNSTGKKEEKIDKLKCAAVTALSAAAVKAKILANQEEDQIRQLAMILIEKQ
LHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASSSRGVAPTLPA
NRMATNFPNSAPRPPMGMTPQRPPTSGPPGMAPTNPNPQYATSSTTISGSSIRPANQDTL
SSVGTK
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaagcgtcgcgacaccgccaatataccttccaataccaccgattcttcctca
tcggagccgccttcttctcgccgtcgtgctggagctcacaagcgaaaggctagcgctctc
ggtgcctctaactccttatccgctccttccaaacgtgttactcgcgacaaatctgcgctt
tcccatcctccaaatcataacggccccttcacccgagctcggcttggccctaacaatgtc
cctggagcagcatcggttaacgcggctggaggtcttgctcccggatcagttaaggcggac
ggctctttacttcattccgaagttcagcgtggagatgcgttagtttctgcggcggaggaa
ttgagcaaggcgactagattggcgaatttggaggcgtcttttgaagctgatttcgaagct
attaaatctcgaggtgcaaaagttcatgttgttccgaatcattgtggttggttttcatgg
acaaaagtccatccaattgaggaacgcacattgtctacttttttcagtggaaaggttgct
aatcgaagtcccgatatttatattgagatacgtaattggattatgaaaaaattccatgca
aatcctagtacacagattgaatcaaaagatttatctgaactagaagttggagaactagat
gctaggcaggaggtgatggagtttctagaccattggggtttgattaattttcaccctttc
ccagccacagattcaatttcaacaaatgatgttaatgatgaaaatcaaaaggattctttg
gttgagaagttgtttcactttgaaacattggaatcctgcccatctgttgtcccaaaaatt
aatgccaccactgcagctcctcctagattgcttcgagaatctgcaatttctgaagagatt
gtgaggcctgagggtccatctgttgagtaccactgtaactcgtgctctggtgattgctct
cgcaaacgttaccactgccagaagcgggcagattttgatttatgttcggagtgctttaac
aatgggaaatttgattccgatatgtcttcatcagattttattctcatggagtctgctggg
gttcctggtgctagtggaggtaagtggacagatcaggaaactctcctcctccttgaggct
ttagagctttataaggaaaactggaatgagattgcagaacatgtggccaccaaaacaaaa
gcccaatgcatattgcacttcattcaaatgccaattgaggatacctttcttgaatcggag
ggcaatgttgaagttggtggaaaagaaactactgttccacctttaattgaaaatgatgcc
tcagttccttctgatatcactgaatccgtggataataaggctactggaaaagaggcttcg
agtgtagaaaatgtgagcaaggaagatacaggtgaggtaaaagttgggcaggataatcca
aaatcagaggatgtggaaggaaaaggttcattagtcaagtccacatcaaaagatggtgat
cagaaggtttctgaagacattgccttgaatgctttgagggaggcatttgaagctattggt
tatgtattaacacctgagcactcactttcatttgctgatgtagggaaccctgtcatggca
ctggctgcattccttgcacgcttagttggatcagatgttgccagtgcctcagctcgtttc
tctttgaaaagcatatctcagaaatctcccagtttagaactggctacaaggcactgcttt
attttagaagatccaccggatgacaagaaggcacaagataatttagagagtgtcgacaat
gtggaagctcagaaaaatgataaggaagagagtgcaaaacagagtgaagacaattctact
tcagtcttagatgacagagccttatcaactaataacagtaataacaaaagtggggaatct
gtgacaaaggaaacaacggagaatggaaattcttcagatgctattagagaacacaaccca
atcatcaatcatggttcagacacatctagtaatttgaaagaattgggggaaaaagaattg
ctgaaggatgaaaagacaggcattgtgaaggaatctgaaaatttagaatcaaaattgaca
tcaaatccagttgaaacgtcgggagaaggaactactgttgaaaaaccattagaatcaacg
ttgtcatcaaatgatgtacatatgtcagatttgcagcatgctgaaaaatctgagattcag
aaacaagttccacctcattctgccaaaacatcaaaagaagtagatgatgagacaaaacgt
ttatcatctggggatgagcctcaaccaataagttctgctaattctgtgaaagaagcctca
aacgatgtagctatggtgtccgattctcatgataagaatgaggctagacaaactgaaaca
tctaaatctttggttaaccagggaccaaacaaggtctctgattctttgccctcagaagag
aatgcgagtacagaaccagtcaaaccaaattcagctgttgaaagaagagcagatgataat
caaagcaaggacaataaagaagaaaactccaacagtacaggtaaaaaagaagaaaagatt
gataagctgaagtgtgctgcggttacagcactgtctgcagctgcagtgaaggcaaaaata
ctggctaatcaggaagaggaccaaatccgtcaacttgccatgatcttaatcgaaaagcag
ctgcacaagttggaaagcaagttagcattcttcaacgagatggataatgtgacaatgaga
gtgagggagcaactagacaggtcaaagcagaggcttttccaagaacgtgcacagataatt
gctgctcgactcggcctacctgcttcgtcatcacgaggtgtggcaccgacgttaccagca
aatagaatggccacgaactttccaaactcagccccaaggcctccaatgggcatgacaccc
caaaggccaccgacttcaggtccgccgggtatggctcctactaaccctaacccccaatat
gcgaccagcagtacaacaatttctgggagttcaattcgccctgcgaatcaggacacactt
tcttctgttgggaccaagtaa
DBGET
integrated database retrieval system