KEGG   Cucumis melo (muskmelon): 103489589
Entry
103489589         CDS       T03195                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3D
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103489589
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103489589
   03036 Chromosome and associated proteins [BR:cmo03036]
    103489589
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103489589
Chromosome and associated proteins [BR:cmo03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    103489589
   PBAF complex
    103489589
   GBAF(ncBAF) complex
    103489589
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding ZZ Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 103489589
NCBI-ProteinID: XP_008447039
UniProt: A0A1S3BH30
LinkDB
Position
1:complement(18708737..18725486)
AA seq 1026 aa
MEDKRRDTANIPSNTTDSSSSEPPSSRRRAGAHKRKASALGASNSLSAPSKRVTRDKSAL
SHPPNHNGPFTRARLGPNNVPGAASVNAAGGLAPGSVKADGSLLHSEVQRGDALVSAAEE
LSKATRLANLEASFEADFEAIKSRGAKVHVVPNHCGWFSWTKVHPIEERTLSTFFSGKVA
NRSPDIYIEIRNWIMKKFHANPSTQIESKDLSELEVGELDARQEVMEFLDHWGLINFHPF
PATDSISTNDVNDENQKDSLVEKLFHFETLESCPSVVPKINATTAAPPRLLRESAISEEI
VRPEGPSVEYHCNSCSGDCSRKRYHCQKRADFDLCSECFNNGKFDSDMSSSDFILMESAG
VPGASGGKWTDQETLLLLEALELYKENWNEIAEHVATKTKAQCILHFIQMPIEDTFLESE
GNVEVGGKETTVPPLIENDASVPSDITESVDNKATGKEASSVENVSKEDTGEVKVGQDNP
KSEDVEGKGSLVKSTSKDGDQKVSEDIALNALREAFEAIGYVLTPEHSLSFADVGNPVMA
LAAFLARLVGSDVASASARFSLKSISQKSPSLELATRHCFILEDPPDDKKAQDNLESVDN
VEAQKNDKEESAKQSEDNSTSVLDDRALSTNNSNNKSGESVTKETTENGNSSDAIREHNP
IINHGSDTSSNLKELGEKELLKDEKTGIVKESENLESKLTSNPVETSGEGTTVEKPLEST
LSSNDVHMSDLQHAEKSEIQKQVPPHSAKTSKEVDDETKRLSSGDEPQPISSANSVKEAS
NDVAMVSDSHDKNEARQTETSKSLVNQGPNKVSDSLPSEENASTEPVKPNSAVERRADDN
QSKDNKEENSNSTGKKEEKIDKLKCAAVTALSAAAVKAKILANQEEDQIRQLAMILIEKQ
LHKLESKLAFFNEMDNVTMRVREQLDRSKQRLFQERAQIIAARLGLPASSSRGVAPTLPA
NRMATNFPNSAPRPPMGMTPQRPPTSGPPGMAPTNPNPQYATSSTTISGSSIRPANQDTL
SSVGTK
NT seq 3081 nt   +upstreamnt  +downstreamnt
atggaggacaagcgtcgcgacaccgccaatataccttccaataccaccgattcttcctca
tcggagccgccttcttctcgccgtcgtgctggagctcacaagcgaaaggctagcgctctc
ggtgcctctaactccttatccgctccttccaaacgtgttactcgcgacaaatctgcgctt
tcccatcctccaaatcataacggccccttcacccgagctcggcttggccctaacaatgtc
cctggagcagcatcggttaacgcggctggaggtcttgctcccggatcagttaaggcggac
ggctctttacttcattccgaagttcagcgtggagatgcgttagtttctgcggcggaggaa
ttgagcaaggcgactagattggcgaatttggaggcgtcttttgaagctgatttcgaagct
attaaatctcgaggtgcaaaagttcatgttgttccgaatcattgtggttggttttcatgg
acaaaagtccatccaattgaggaacgcacattgtctacttttttcagtggaaaggttgct
aatcgaagtcccgatatttatattgagatacgtaattggattatgaaaaaattccatgca
aatcctagtacacagattgaatcaaaagatttatctgaactagaagttggagaactagat
gctaggcaggaggtgatggagtttctagaccattggggtttgattaattttcaccctttc
ccagccacagattcaatttcaacaaatgatgttaatgatgaaaatcaaaaggattctttg
gttgagaagttgtttcactttgaaacattggaatcctgcccatctgttgtcccaaaaatt
aatgccaccactgcagctcctcctagattgcttcgagaatctgcaatttctgaagagatt
gtgaggcctgagggtccatctgttgagtaccactgtaactcgtgctctggtgattgctct
cgcaaacgttaccactgccagaagcgggcagattttgatttatgttcggagtgctttaac
aatgggaaatttgattccgatatgtcttcatcagattttattctcatggagtctgctggg
gttcctggtgctagtggaggtaagtggacagatcaggaaactctcctcctccttgaggct
ttagagctttataaggaaaactggaatgagattgcagaacatgtggccaccaaaacaaaa
gcccaatgcatattgcacttcattcaaatgccaattgaggatacctttcttgaatcggag
ggcaatgttgaagttggtggaaaagaaactactgttccacctttaattgaaaatgatgcc
tcagttccttctgatatcactgaatccgtggataataaggctactggaaaagaggcttcg
agtgtagaaaatgtgagcaaggaagatacaggtgaggtaaaagttgggcaggataatcca
aaatcagaggatgtggaaggaaaaggttcattagtcaagtccacatcaaaagatggtgat
cagaaggtttctgaagacattgccttgaatgctttgagggaggcatttgaagctattggt
tatgtattaacacctgagcactcactttcatttgctgatgtagggaaccctgtcatggca
ctggctgcattccttgcacgcttagttggatcagatgttgccagtgcctcagctcgtttc
tctttgaaaagcatatctcagaaatctcccagtttagaactggctacaaggcactgcttt
attttagaagatccaccggatgacaagaaggcacaagataatttagagagtgtcgacaat
gtggaagctcagaaaaatgataaggaagagagtgcaaaacagagtgaagacaattctact
tcagtcttagatgacagagccttatcaactaataacagtaataacaaaagtggggaatct
gtgacaaaggaaacaacggagaatggaaattcttcagatgctattagagaacacaaccca
atcatcaatcatggttcagacacatctagtaatttgaaagaattgggggaaaaagaattg
ctgaaggatgaaaagacaggcattgtgaaggaatctgaaaatttagaatcaaaattgaca
tcaaatccagttgaaacgtcgggagaaggaactactgttgaaaaaccattagaatcaacg
ttgtcatcaaatgatgtacatatgtcagatttgcagcatgctgaaaaatctgagattcag
aaacaagttccacctcattctgccaaaacatcaaaagaagtagatgatgagacaaaacgt
ttatcatctggggatgagcctcaaccaataagttctgctaattctgtgaaagaagcctca
aacgatgtagctatggtgtccgattctcatgataagaatgaggctagacaaactgaaaca
tctaaatctttggttaaccagggaccaaacaaggtctctgattctttgccctcagaagag
aatgcgagtacagaaccagtcaaaccaaattcagctgttgaaagaagagcagatgataat
caaagcaaggacaataaagaagaaaactccaacagtacaggtaaaaaagaagaaaagatt
gataagctgaagtgtgctgcggttacagcactgtctgcagctgcagtgaaggcaaaaata
ctggctaatcaggaagaggaccaaatccgtcaacttgccatgatcttaatcgaaaagcag
ctgcacaagttggaaagcaagttagcattcttcaacgagatggataatgtgacaatgaga
gtgagggagcaactagacaggtcaaagcagaggcttttccaagaacgtgcacagataatt
gctgctcgactcggcctacctgcttcgtcatcacgaggtgtggcaccgacgttaccagca
aatagaatggccacgaactttccaaactcagccccaaggcctccaatgggcatgacaccc
caaaggccaccgacttcaggtccgccgggtatggctcctactaaccctaacccccaatat
gcgaccagcagtacaacaatttctgggagttcaattcgccctgcgaatcaggacacactt
tcttctgttgggaccaagtaa

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