Cucumis melo (muskmelon): 103490287
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Entry
103490287 CDS
T03195
Name
(RefSeq) WD-40 repeat-containing protein MSI2-like
KO
K10752
histone-binding protein RBBP4
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03082
ATP-dependent chromatin remodeling
cmo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103490287
03083 Polycomb repressive complex
103490287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103490287
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103490287
Histone modification proteins
HAT complexes
HATB complex
103490287
HDAC complexes
Sin3A-HDAC complex
103490287
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103490287
PRC2.2
103490287
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103490287
Heterochromatin formation proteins
Other heterochromatin formation proteins
103490287
Chromatin remodeling factors
NuRD complex
103490287
NuRF complex
103490287
NuRF complex (fruit fly)
103490287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
EIF3I
WD_LRWD1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_WDR19_1st
MIOS_WD40
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
103490287
NCBI-ProteinID:
XP_008447958
UniProt:
A0A1S3BJ89
LinkDB
All DBs
Position
1:16501729..16504235
Genome browser
AA seq
393 aa
AA seq
DB search
MAGEEDGVDEVVEEFSIWKKNSPYLYDLLISHSLEWPSLTVDWVPSAPFLHQVNPSLAVH
KLVLGTHTSEDVPNFLMVADAVFPVKSSETRIDISGEDPILPKIEITQKIRVEGEVNRAR
CMPQNPEIVGAKTSGCEVYVFNRAKQWEKDQGAVCDPDLRLRGHDKEGYGLSWSPFKEGY
LLSGSNDQKICLWDVSSMADKNVLDAMHVYEAHESVVGDVSWHLKNENLFGSVGDDCLLV
IWDLRTNKSVDSVRAHEEEVNYVSFNPYNEWILATASSDTTVGLFDLRRLAEPLHALSSH
TEGVFQVEWDPNHETVLASSGDDRRLMVWDLNNIGNEQDGDAEDGPPELLFSHGGHKAKI
SDFSWNSNEPWVISSVAEDNSVQVWQMAKSIYR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagaagaagatggtgtcgatgaagtggtggaagaattctctatctggaagaag
aactctccctatttgtacgatcttctcatttcccactctctggaatggccgtctctcact
gtcgattgggttccatcggccccctttcttcaccaggtcaacccatctctcgccgtccac
aagctcgtcctcggaacccacacatcggaggacgtccccaattttctcatggtggccgat
gctgtttttcccgtcaaatcatccgaaaccagaatagacattagtggggaagaccccatt
ctgccaaagatagagataactcagaagatacgtgttgaaggggaggtgaatagagcgcgg
tgtatgccgcagaacccagaaatcgttggtgcaaagacgagtggatgcgaggtgtatgtt
tttaatcgtgctaaacagtgggagaaggatcagggagctgtgtgtgaccctgatttgaga
ttgaggggtcatgataaagagggttatgggttgtcttggagcccgtttaaggagggttac
ctcttaagtggctcaaatgatcagaaaatttgtttgtgggacgtatcctccatggccgac
aaaaatgtgcttgatgcaatgcacgtctatgaggctcatgaaagcgtggtcggtgatgtc
tcatggcatttgaagaatgagaacttgtttggatctgttggtgatgattgcttgttggtg
atatgggatttgcgtacaaataaatctgtggattctgttcgagctcacgaagaggaggtg
aactatgtttctttcaatccatacaacgaatggattttagcaacagcatcatcagatacc
acggtgggtctgtttgatctacggaggctcgctgaaccactgcacgctctcagcagccac
acggagggagtgtttcaagtggagtgggatccaaatcatgaaactgtgttggcatcttct
ggtgatgatagaaggttgatggtgtgggatctaaacaacataggaaatgagcaagatgga
gatgctgaagacgggcctccagagttgttattttcacatggaggacacaaggctaaaata
tcagacttcagttggaacagcaacgagccgtgggtcatttcaagtgtggctgaagataac
tcagttcaggtctggcaaatggccaaaagtatttaccgatga
DBGET
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