Cucumis melo (muskmelon): 103490563
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Entry
103490563 CDS
T03195
Name
(RefSeq) transcriptional elongation regulator MINIYO isoform X1
KO
K20826
RNA polymerase II-associated protein 1
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103490563
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103490563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_N
RPAP1_C
Motif
Other DBs
NCBI-GeneID:
103490563
NCBI-ProteinID:
XP_008448341
UniProt:
A0A1S3BKC4
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Position
11:19750375..19766032
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AA seq
1623 aa
AA seq
DB search
MEKKTQSCRRSQSNSSARAKVFGTNSLQLSEDDATRLVGGIVEKGVSDSEQSTPFFSPAP
RPSVLPFPVARHRSHGPHWESVTSKKGGDNIKADRGEDGEEDETMMVADSIANFANPIQR
KKKSSLDFGRWREASPDHNHGAANREEKELQSLAKTASLSRAGEANTGTDDMSCRPFSVH
VLAPSLMECERSSSDFVNDSTGNKTNSAGFELKGSDKQHLPENLQDVRDQRGDISESEVN
ESMQLDGTSLRDMGTRHHLNSEMTPCFQSNIKGDDAFLTLKSQIDAENRARMQKMSPEEI
AEAQAEIMEKMSPALVKALKMRGEGKLKQGSSKPDVSSNYELGNLQKESRIDGNGSSNKE
NGVTSVKTTLKDTKSGLQDVSVQKIDSGSSIWNAWNERVEAVRSLRFSLEGNLVESYSFQ
QSKNVHGYSTENVASRDFLRTEGDPSAAGYTINEAVALTRSVIPGQRVLGLHVISNVLDK
ALLNTHLTQVGSTMIKNRSSVDYNAIWAYILGPEPELALSLRMCLDDNHNSVVLACAEVI
QSVLSCNLNESFFDSLEKTSTYEKDLYTAAVFRSKPEINVGFLQGGFWKYSAKSSNILPI
TEDFGIVEDGVKYTIQDDIVVAQQDIAAGMVRMGILPRLVYLLEADPSVALEECILSILV
AIARHSPICAQAIMKCDRLIELIVQRFTMSEKIDILSLKIKSVVLLKVLARSDRKNCFAF
VKSGAFLTVIWHLYHYTSSIDQWLKSGKEKCKLSSTLMVEQLRLWKVCIQYGYCVSYFSD
VFPSLCLWLNPPNFGKLIENNVLREFTTISMEAYHVLEALARRLPIFFSEKHLDSQEPGF
TGDESEAWSWSCAVPMVDLAIKWLGSKKDPFICKFFSSQKGIRNDFVFEGISLAPLLWVY
SAVFKMLSRVVERIPQDILTQIGSDQIVPWIPEFVPQVGLEIIKNGFLSFADASDMNPKT
SPSGGNSFVEDLCFWREHGEFEMSLASVCCLHGLMLSIVNIDCLILLAKTESQAYPPKDV
NSSREGEILRVGMFKTSLVEQRSMLDLFTKKIALECDSLRLIETFGRGGPAPGVGIGWGV
CGGGYWSLAVLLAQNDSAFLMSLIEAFHTIPTLNGLTAQESLTLQSINSALAVCLVLGPR
DIGLIEKTMEFLIQAPILYNFNLYIQRFLQLNGNVKQFGWKYSEDDCLIFCRTLSSHYKD
RWLTPKGSKSVKNKSNLSDGTFKSGRVSLDTIYEESDETNRVVEGCTCLIVQWAYQRLPL
PGHWFFSPVSTICYSKHASRQKSDAQSIMQESSDLFDVAKSGLFFILGIEAFSSFLPDDF
PKPVLSVPLIWKLHSLSVVLLTDIGVLDDEKSRDVYEVLQDLYGQRLNEAMSCRHPADIV
EKDAKHLPSQLENKRSNIEFLMFQSEIHDSYSLFIETLVEQFSSVSYGDVLYGRQIVLYL
HRCVESQTRLAAWNALNSARVFELLPPLEKCLADAEGYLQPIEDNEAILEAYVKSWVSGA
LDRSASRGSVAYLLSLHHLSSYIFHSYPVNNLLLRNKLSRSLLRDCSQKHHRKEMMTNLI
LYTKPSTHLIAGQKGVGTSIGMSDVEKRLEVLKEACEKNSSLLTVVEELGSSAKSELSAM
CNM
NT seq
4872 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaagacacagagctgtagaagaagccaatccaatagctcggctcgcgcaaag
gtattcgggaccaactctcttcagctaagtgaggacgatgccacgcgattagtcggtgga
atagttgaaaaaggtgtctccgactccgagcaaagcacaccctttttctcacccgctccc
agaccttccgttttgccgttcccggtcgctcggcatcggtctcacggtccgcattgggaa
tcagtaactagtaaaaagggtggggataatatcaaagctgacaggggggaggatggggaa
gaagatgaaacaatgatggtggctgactctatagcaaattttgcgaatccaatacagagg
aaaaagaaaagtagcttagactttggccggtggagagaggcttccccagaccacaatcat
ggtgcagcaaacagagaggaaaaggagcttcaaagcttagcaaaaactgcaagtctatcg
cgtgctggggaagcaaataccggtacagatgatatgtcatgcaggcccttctcagtccat
gtgcttgcaccttctcttatggaatgtgaacgtagttcatctgactttgtaaatgattca
actggaaacaagacaaacagcgctggttttgagttgaaggggtcagataaacaacatctt
ccagagaatcttcaagatgttcgtgatcaacgaggagatatttcagagagtgaagttaat
gagagtatgcaactggatggtacttcgttgcgggatatgggcacaaggcatcatttgaat
tccgaaatgactccctgctttcagtccaatattaagggagatgatgcattcttgacactg
aaaagccagattgatgcagagaaccgtgcaaggatgcaaaaaatgtcaccagaggagatt
gctgaagcacaggctgagattatggagaagatgagcccagcactagtgaaagccctgaaa
atgaggggtgagggaaaattgaagcaggggtcatcaaagcctgacgtgagcagtaattat
gagttgggtaatctacaaaaagaaagtagaattgatggaaatggttcttctaacaaagag
aatggtgtaacgtctgttaagacaaccttaaaggatacaaagagtgggcttcaggatgtt
tcagtgcagaaaattgattcaggtagcagtatatggaatgcatggaatgaaagggttgaa
gctgtaaggtcgttaaggttttccctggaaggcaatctagttgaaagctattctttccaa
cagtcaaagaatgttcatgggtacagcactgagaatgttgcttcacgagattttcttcga
actgagggggatccaagtgctgcaggttatacaattaacgaagctgtggcactgacgagg
agtgtgataccaggtcaacgtgtccttgggttgcatgtcatttcaaatgtgcttgacaag
gcattgcttaatacacacctaacacaagttgggtccacaatgattaaaaataggagctct
gttgattacaatgcaatttgggcttatattcttggccctgaaccggagcttgctttgtcc
ctgaggatgtgcctggacgataatcataactctgtcgttctagcttgtgctgaagttatt
cagagtgtattgagctgtaatttgaacgagtccttctttgatagcctagagaaaacatca
acttatgaaaaggatctctacactgctgctgtattccgaagtaaaccagagatcaatgtt
ggtttcctccaaggtggattttggaagtatagtgctaaatcttctaatattcttcctatt
accgaagattttgggattgttgaagatggggtaaaatatacaatccaggatgatattgtg
gttgcacaacaagatattgcagcaggtatggttcgcatgggaattcttcctaggctcgtc
tatcttctagaggcagatccttcagtagccttagaagagtgcatcctttcaatacttgtt
gcaatagcaaggcattccccaatatgtgcccaagcaatcatgaaatgcgacaggcttatt
gagttgattgtccagagatttacaatgagcgagaaaatagatattctttccttaaagatt
aaatcggttgttcttttgaaggttttagctcgttcagacaggaagaactgttttgcattt
gtgaaaagtggtgcttttctaaccgttatatggcatttgtatcactatacttcctccatc
gatcaatggttgaagtcggggaaggaaaaatgtaaactttcatcaactttgatggttgaa
caattaaggctgtggaaggtttgcattcagtatggatattgtgtatcttacttctctgat
gttttcccttccttgtgcttatggttgaacccaccaaattttggaaaacttatagagaat
aatgtcctgcgtgaatttacaacaatttctatggaggcataccatgttttagaggctttg
gcaagaagacttccaatttttttttcagagaaacatttagacagtcaagaaccaggattt
actggtgatgaatctgaagcttggtcctggagttgtgctgttccaatggttgatttagct
ataaaatggttaggttcaaagaaggatccattcatatgcaaattcttttcatcacaaaaa
gggattaggaatgactttgtgtttgaaggtatatcactggcgccattgttgtgggtttat
tctgctgtctttaagatgctgtctcgagtggttgaaaggatcccgcaggacatcttgacc
cagattggaagtgatcagattgtgccttggataccagagtttgtaccacaggttggactt
gagataattaaaaatggctttctgagctttgccgatgcatcagatatgaatcccaaaacc
agcccctctggaggtaactcttttgtagaggatctttgcttttggagagaacacggtgaa
tttgaaatgtctctggcttctgtatgttgtcttcatgggttgatgctgagtattgtgaat
attgactgtctgattctgttagctaagactgagagccaggcttatcctcccaaagatgtt
aattcctcaagggaaggggaaattttaagggttgggatgtttaagacgtccctcgtggaa
cagagaagcatgcttgaccttttcactaagaaaattgctctggagtgtgattctctgcgg
ttaatagagacctttggcagagggggccctgcacctggggtaggaattggttggggcgtg
tgtggtggtggatattggtccctggctgttttattagcacaaaatgattcagcatttctc
atgtccctcattgaagcatttcacacaattccaactttaaatggactgactgctcaagaa
tccttgactttgcaaagcataaattctgccttggctgtatgcttggttcttggcccaaga
gatattggtttgatcgagaaaactatggaatttttgatccaagctcctattttgtataat
ttcaatctttatattcagaggtttctccaactcaatggaaatgtgaagcaatttggctgg
aagtacagtgaagatgactgcttgatcttttgtagaacattaagttctcactacaaggat
aggtggttaactccaaagggttccaaatccgtgaagaataagagcaacttaagtgacgga
acatttaagagtggcagagtatctttggatacaatatacgaagagtcagatgagacaaat
agggtggtcgaaggctgtacttgtttgatagtacagtgggcttaccaaagacttccactt
cctgggcattggtttttcagtccagtttcaactatctgttatagtaagcatgctagtcgt
caaaaatctgatgctcaaagtattatgcaggaatctagtgatttgtttgatgttgctaag
agtgggctcttctttattttaggcattgaagcattttcttcctttctacccgatgatttc
cctaaacctgtcctgagtgtgccattgatttggaaattgcattccttatctgttgtttta
ctcactgatattggagtcttggatgatgagaagagtagagatgtttatgaggttttgcaa
gacctctatggtcagcgtcttaacgaagctatgtcttgtagacatcctgcagacatcgtg
gagaaggatgcaaaacatttaccatcacaactggaaaataagaggagcaatatagagttc
ctaatgtttcaatccgagatccatgatagttactcactatttattgaaactctagtggag
cagttctcctctgtatcctatggtgacgtactatatggtcgacaaattgtactatatctt
caccgatgcgttgaatctcaaacacgtcttgctgcttggaatgcactaaatagtgctcgt
gtttttgaacttcttccacctcttgaaaagtgcttagcagacgctgaagggtatctacaa
ccaattgaggataacgaagccattttggaagcttatgtgaaatcatgggtttcaggtgcc
cttgacagatctgcaagtcgaggttcagtagcttacttactatctctgcaccacctctca
tcctacatattccattcttacccagtcaacaacttgttgcttcggaacaagctctcaagg
tctcttttgcgagactgctcccaaaagcatcaccgcaaggaaatgatgacgaatcttatc
ttatataccaaaccatcaacccatcttattgctggacaaaagggtgttggcacatcaatt
ggtatgagcgatgtagaaaaaaggcttgaagtgttgaaggaagcttgcgaaaagaattcc
tctcttttgacagtagttgaagagctcggttcttctgcaaaaagtgaactgtctgcaatg
tgtaatatgtag
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integrated database retrieval system
