| Entry |
|
|---|
| Name |
(RefSeq) THO complex subunit 4A-like isoform X2
|
|---|
| KO |
|
|---|
| Organism |
cmo Cucumis melo (muskmelon)
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:cmo00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103490589
09122 Translation
03013 Nucleocytoplasmic transport
103490589
03015 mRNA surveillance pathway
103490589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:cmo03019]
103490589
03041 Spliceosome [BR:cmo03041]
103490589
Messenger RNA biogenesis [BR:cmo03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103490589
TREX complex
103490589
Spliceosome [BR:cmo03041]
Complex C
Other components
EJC/TREX
103490589
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103490589
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
11:20024248..20026247
|
|---|
| AA seq |
191 aa
MAAPLDMSLDDIIKNNKKSRSGNSRGRGRGSGPGPVRRFPNRAANRTPYSAPKAPETTWQ
HDMFADPSSGFIGQGGRASAIQTGTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDK
SGRSKGTAEVVFSRRLDAVAAVKKYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFEN
SNGAPRSDTIL |
|---|
| NT seq |
576 nt +upstreamnt +downstreamnt
atggccgctcctttggacatgagtcttgacgatatcataaagaacaacaagaaatccaga
tccggaaattcgagaggacgcggaagaggttctggacctggtcccgtccgtcgatttccc
aatcgcgccgctaaccgcacaccttattccgctcccaaggcgccggagacgacgtggcaa
catgatatgttcgccgatccgagttctggattcattgggcaaggtgggcgagcttctgct
attcagactgggactaagctttatatatctaatttagattacggtgtttctaacgaagat
attaaggagcttttttctgaagtcggtgatatgaaacgtcacggaatccattatgacaaa
agtgggagatccaagggaacagcggaagtagttttctcacgacgactagatgctgttgcg
gctgtcaagaagtacaacaacgttcagcttgatggaaaaccaatgaagatagagatcgtt
ggaactaatatttccacgcctgctgttggtcctaccgctgccgtgaaccctttcgaaaat
tcaaatggggctccgagaagcgataccatcctctga |
|---|
