Cucumis melo (muskmelon): 103490644
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Entry
103490644 CDS
T03195
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X3
KO
K08739
DNA mismatch repair protein MLH3
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103490644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103490644
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103490644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103490644
NCBI-ProteinID:
XP_008448458
UniProt:
A0A1S3BJQ0
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Position
6:27529806..27542691
Genome browser
AA seq
1219 aa
AA seq
DB search
MGTIKPLPKSVRNSVRAGVILYDVTKVVEELVYNSLDAGASKISIFIGIGTSYVKVVDDG
SGITRDGLVLLGERYVTSKFHDLIDMDLKGGTFGFRGEALASISDLSLVEIITRACGRAN
GYRKVLKGCKCLYLGIDDMEDFGTTVIVRDLFYNQPVRRKHMQSSPKKVLHAVKKCVVRT
ALVHSKVSFKIVDSESESILLCTDPSPSPLSLLRSGFGSEVSRSLHELKIGGGDLKLSGY
ICSPFDNFSIKGVQYVYINRRFICKGQIHKLLNQLAGRFMSLDPQTDLVFHRRKRSRSEA
NPAYVLNLECPVSFYDLTFESSKTFVQFKDWTPILTFIEEAIQQFWKEKYNCGKSVVHSA
PIVGDELWKDEDNTISTKSNDILSVKKNRMQSCQASLIDMFSPSVMFTKHDDILSYRFCD
KKARESSHTSSIEFDDGDHHLAKMQFSHQAGHFPKSWDTPLAKCSTTAVRNNDHYQLVPE
FPFVSEGSFLDRRLNSPKGCDDIVEENIFCSDFKGQSSKMHIDMITGSAESTPSSYFHEI
SYDDCIFMGNKPSLTGCSSMSSFHPYIQNDVIDRTQMQGMLDDEVDIMKLDAYIKGSDFC
AGSSLHAEHMQMFLSSYQTRNSPNAHMTSKSILATEWDVDCFSVRDEVERSWRSRDRTPF
KQLVDDDEKGCRFDYDIMLSSSKKNNYKSSYTDSAMIVDDVFDTRENLGNFLKKSNNFEH
SSPRSPDMHSRQKYFSNWRLPERDCEKAYGSSEPKFGHQAFKQKYCSVERPRRGKSAPPF
YKRKTSFYCLDQQKAERPNAASFYCLNEGKADQSSASSFYCMDQGKVEKLKASVFLDSPP
HLEPVELRDSEHVSGTSNQYVKPFPVDDLLVETRSSRTDTIKMSAIIGNGEEKQGEISKQ
SQSDVKVTESAIELCSKETQESSDLWIKWKNCCPTTRNEDSHAFDDEVSILDISSGFLSL
ASNSLVPDLIDKNFLENAKVLLQLDKKFIPVVSGGILAVIDQHAADERIRLEDLRQKLLS
GEAKTTAYLDAEHELALPEIGYQLLYNYADQVKEWGWICNIHAQDSKSFRSNLNILHKQE
TVITLMAVPCILGVNLSDVDLLEFLHQLADTDGSSTMPPSVLRVLNSKACRGAIMFGDSL
LPSECSLIVEELKQTSLCFQCAHGRPTTVPLVDLEALHKQIKELEIHGKSGSNGTWNGLG
RHELSIERMLQRLSSAEGL
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atggggactatcaagcccctgccgaagtcagttcgtaattctgtgcgtgctggcgttatt
ctctatgatgtcacgaaggtcgtggaagagcttgtttataatagtttggatgctggtgcg
tcaaagatttcaattttcattggcattgggacatcctatgttaaagtagtggacgatgga
tctggtattactcgagatgggttagtcttgctcggagaaagatatgtgacatcaaaattt
cacgatctcatcgacatggatctcaaaggtggaacatttggctttcgaggagaggcattg
gcttccatttcagatttgtcattagtggagatcataactagagcatgtgggagggcaaat
ggatatcgtaaagtcttaaagggttgcaaatgcttgtatcttggaattgatgatatggaa
gattttggcactactgttattgttcgagatctgttttacaaccaaccagttcgaaggaaa
catatgcaatccagccccaagaaggtcttgcatgcagtcaagaaatgtgtagttcgaact
gcccttgtacattctaaagtttccttcaaaattgtagatagtgaaagtgagagtattctt
ctttgcacggatccctctccttctcctttatcacttttgagaagtgggtttggtagtgag
gtttccaggtctctccatgaattaaaaatcggtggtggggacttaaagctatcaggctat
atatgcagtccgtttgacaatttcagtatcaagggtgttcaatatgtctatattaacagg
cgattcatttgcaagggccaaattcataaattacttaatcaactggccggtagatttatg
agcctggatccacagactgaccttgtctttcacagaaggaagagaagcaggtctgaagca
aatcctgcttatgttttaaatttagagtgccctgtatctttctacgatctaacatttgaa
tcatccaagacctttgttcagtttaaggactggaccccaatacttaccttcattgaagag
gccattcaacaattttggaaggaaaaatataattgtggaaaatctgtggtccattcagcc
cccatagttggagatgagctgtggaaggatgaagataacacgatttcaacaaaatcaaat
gatattctatctgtgaagaagaacagaatgcaaagctgccaggcttccctcattgatatg
ttttcaccatcagtcatgttcacaaaacatgatgacatcttgtcctataggttttgtgac
aaaaaggcacgtgagagttcacacacaagttcaattgaatttgatgacggtgatcaccat
ctagctaagatgcaatttagtcaccaagccggtcatttcccaaaatcatgggatactccc
ttggcaaaatgctcaactacagctgtccgaaacaatgaccattaccaattggtacctgaa
tttccttttgtatctgaaggctcctttttggatagaaggctgaattctccaaaaggatgt
gatgacattgttgaggagaatatcttctgttcagattttaaaggtcaatcatctaaaatg
catatcgatatgatcactgggtctgccgaaagtacaccatcttcttactttcatgaaatt
agctatgatgattgtatcttcatgggtaacaaaccttcacttacgggatgctcctcaatg
agcagttttcatccgtacattcaaaatgatgtcatcgacagaacccaaatgcaaggaatg
cttgatgatgaagttgatattatgaaacttgatgcttacatcaagggttctgatttttgt
gccggatcctcattgcatgctgagcatatgcagatgtttttgtcaagttatcagaccaga
aattccccaaatgctcacatgacttcaaaatccatattagctacagaatgggatgttgat
tgcttcagtgttagggatgaggtcgaaaggagctggagatctagagataggacacccttc
aagcagttggtggatgatgatgaaaagggctgccgatttgattatgatatcatgttgagt
agctccaaaaaaaataattacaagtcaagttacaccgatagtgcaatgatagttgatgat
gtttttgatactagagaaaaccttggtaacttccttaaaaagtcaaataattttgaacat
tcttctcctaggagtcctgatatgcactcccgtcagaagtatttttccaattggagattg
cctgaaagagattgtgaaaaggcttatggaagctcagaacctaagtttggacatcaagct
tttaaacagaagtactgttctgttgaaaggcctagaagaggcaaatcggctccacctttt
tacaaaagaaagacgagtttctattgcctggaccaacagaaggcagaaaggcctaatgcc
gctagtttctattgcctgaacgaaggaaaagctgatcagtctagtgcctctagtttctat
tgcatggaccaggggaaagttgaaaagcttaaggcatcggtcttccttgacagcccaccc
catttagaaccagttgagctgagagattccgaacatgtctctggtactagtaatcaatat
gttaagccttttcctgttgatgacttattggttgaaaccagatcttccagaacagatacg
ataaagatgtctgctattataggaaatggtgaggagaaacaaggagagatctccaagcag
tcccaatccgatgttaaggttactgaaagtgctatagaattatgctcaaaggaaactcaa
gagtcctcagatctatggatcaaatggaaaaattgctgtccaactacaagaaatgaggat
tcacatgcttttgacgatgaagttagcatacttgatatctcttcagggttcctatcgctt
gctagcaattccttagttccagacttgatcgataaaaatttccttgaaaatgcaaaagtt
cttctacagctagacaagaaattcattccagttgtttctggtggaattttggctgttatt
gatcagcatgctgcagatgaaagaatccgacttgaagatcttcgtcaaaagctgttgtcc
ggtgaagcaaagactacagcctatctagatgctgaacacgagctggcactgccagagatt
ggttaccagttgctgtataactatgctgatcaggttaaagagtggggttggatctgtaat
attcatgctcaagattcaaaatccttccgaagcaatttgaacatcctacacaagcaggaa
acggtcatcacgctaatggcagtaccatgcatattaggggttaatttatctgatgtagat
cttctggagtttcttcatcagcttgctgatacagatggctcatcaacgatgccaccatcc
gtacttcgagttcttaattcaaaggcctgcagaggtgcaattatgtttggagactctttg
ttaccttcggagtgctcccttatcgttgaagaactgaagcagacttctctatgtttccaa
tgcgcccatggacggccaacgacggtacctcttgtggacttggaggcattgcataagcag
ataaaggagctggaaatacatggcaaaagtggttcaaatggaacgtggaatggtctggga
cgacacgagctgagcatagaaaggatgttgcagcgcttgagttcggctgaaggtttataa
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integrated database retrieval system
