Cucumis melo (muskmelon): 103490678
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Entry
103490678 CDS
T03195
Name
(RefSeq) vacuolar protein sorting-associated protein 35A-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103490678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103490678
Membrane trafficking [BR:
cmo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
103490678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
103490678
NCBI-ProteinID:
XP_008448526
UniProt:
A0A1S3BJA0
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Position
6:27804470..27814957
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AA seq
790 aa
AA seq
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MISDGVEDEEKWLAAGIAGLQQNAFYMHRSLDSNNLKDALKYSAQMLSELRTSKLSPHKY
YDLYMRAFDELRKLEIFFMEETKRGCSIIDLYELVQHAGNILPRLYLLCTVGSVYIKSKE
APAKDILKDLVEMCRGIQHPLRGLFLRSYLSQVSRDKLPDIGSEYEGDADTVIDAVEFVL
QNFTEMNKLWVRMQHQGPARDKEKREKERSELRDLVGKNLHILSQVEGVDLDMYKDIVLP
RVLEQVVNCKDEIAQFYLMECIIQVFPDEYHLQTLDVLLGACPQLQPSVDIKTVLSQLME
RLSNYAASSAEVLPEFLQVEAFSKLSKAIGKVIEAQVDMPTVGVVTLYSALLTFTLHVHP
DRLDYADLVLGACVKKLSGRGKIEDTRATKQIVALLSAPLEKYNDIVTTLKLSNYSHVME
YLDGETIKVMATVIVQSITKNKTQISTADNVEALFELIRGLIKDLDGSLPDEVDEDDFKE
EQSSVARLIQMLYNDDPDEMFKIISTVKKHILTGGIKRLPFTVPALVFSSLKLVRQLQGQ
EENPFGDETPTTPKKIFQLLTQTIEILSSVPAPELAFRLYLQCAEAANDCDLEPVAYEFF
TQAYILYEEEISDSKAQVTALHLIIGTLQKMHVFGVENRDTLTHKATGYSAKLLKKPDQC
RAVYACSHLFWLDDHDNMKDGERVMLCLKRALRIANAAQQMSNATRGSTGPVSLFIEILN
KYLYFFEKGNPQITVATIQGLIELITTEMQSDTTTPDSSADAFFASTLRYIEFQKQKGGA
VGEKYEPIKV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgatttccgacggagttgaggacgaggagaagtggcttgctgctgggatcgccggcctc
cagcagaatgcgttctacatgcaccgatctttggactccaacaatctcaaagatgctttg
aagtattctgcgcagatgctttctgagctgcggacttcgaagctttcccctcataaatac
tacgatttatacatgcgagcgtttgacgagttgaggaagctggagattttctttatggag
gagacgaagcggggttgctcaataatcgacttgtatgaacttgtacagcatgctggcaat
atattacccagactgtaccttctttgtactgtgggatcagtgtatatcaaatccaaggag
gctcctgcaaaagatattcttaaagatctggtcgagatgtgccgtggtattcagcatccc
ttacgtgggctgtttttgaggagttatctttctcaagtcagtagggataagctacctgat
attggctcagagtatgaaggagatgcagacactgtcattgatgcagttgaatttgtactc
caaaatttcacagaaatgaacaaactttgggtacgaatgcagcatcaggggcctgcccgg
gacaaggagaaacgggagaaggaaaggagcgagctacgtgatcttgttggaaagaatctg
catatactcagtcaggtggagggtgttgaccttgatatgtacaaggatattgtacttcct
agagttctggagcaggtcgttaattgtaaggatgaaattgctcaattttatttgatggaa
tgcattattcaagtatttcctgatgagtatcacttacaaaccctggatgttttgttgggc
gcctgcccccagcttcagccatctgttgatatcaagacggtgttgtcccaattaatggaa
aggctttcaaactatgctgcttcaagtgcagaagttttaccagaattcttgcaagtagaa
gctttttcgaaactgagcaaagccattgggaaggtgatagaagcacaggtcgatatgcct
acagtgggagttgtaactttatactctgcacttcttacatttacacttcatgttcatcca
gatcggcttgattatgcagatcttgttttgggagcatgtgtgaagaaactctctggtaga
gggaaaatcgaagacacaagagcaacaaagcagattgttgcccttctgagtgctccattg
gaaaaatataatgacattgtcactacattgaaattgtcaaactattctcatgtcatggag
tatcttgatggtgaaacaatcaaagtcatggcaacagttattgtacaaagcataacaaag
aataaaactcaaatatctaccgctgacaatgttgaggcattatttgaattgataagaggg
cttatcaaggatttagatgggtctcttcccgatgaggttgatgaagatgatttcaaggag
gagcaaagttctgttgctcgtcttattcagatgttgtataatgacgaccccgatgaaatg
ttcaagataataagcaccgtgaagaagcatatcctgacaggaggaataaagcgtctgcca
tttactgttcctgcccttgttttttcatctctcaagttggttaggcaattgcaaggccaa
gaagaaaatccttttggagatgagacaccaactaccccgaagaaaatttttcagctatta
actcagaccattgagatcctttccagtgttcccgccccagaattggcgtttcggctgtac
ctacaatgtgctgaggctgccaatgattgtgatttagaacctgttgcttacgaatttttt
acccaagcgtacattctttatgaagaagaaatttcagattcaaaagctcaagtgactgca
ttacatttaataataggcacgcttcagaagatgcacgtttttggtgttgaaaacagggat
actttaacccacaaggccactgggtactctgcgaagcttttaaaaaaacctgatcaatgt
cgagctgtttatgcttgctcgcatctcttctggcttgatgatcatgataatatgaaggat
ggtgagagggtgatgctttgcctaaagcgtgcattaagaatagcaaatgctgctcagcaa
atgtcaaatgctacaaggggtagcactgggccagtctctcttttcattgagatactgaac
aaatacttatattttttcgagaagggcaacccgcagatcaccgtagctaccatccagggc
ctaattgaattgatcacaaccgaaatgcaaagcgataccactactccggattcatcggca
gatgctttctttgccagcacactccggtacatcgagttccaaaagcagaaaggtggtgca
gtgggtgagaaatatgagcccattaaagtgtag
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