KEGG   Cucumis melo (muskmelon): 103490941
Entry
103490941         CDS       T03195                                 
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03022  Basal transcription factors
cmo03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103490941
  09124 Replication and repair
   03420 Nucleotide excision repair
    103490941
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cmo03021]
    103490941
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103490941
Transcription machinery [BR:cmo03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     103490941
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     103490941
SSDB
Motif
Pfam: Tfb5
Other DBs
NCBI-GeneID: 103490941
NCBI-ProteinID: XP_008448918
UniProt: A0A1S3BK87
LinkDB
Position
6:complement(30240470..30242955)
AA seq 70 aa
MVNAIKGMFISCDVPMAQFIINYNASLPASHRFIIHILDNTHMFVQPHVADMIRNAISEF
RDQISYEKPT
NT seq 213 nt   +upstreamnt  +downstreamnt
atggttaatgctattaaagggatgttcatctcctgtgacgtacctatggcacaatttatc
atcaattacaatgcctccttgcctgcatcccatagatttataatccatatactggataac
actcacatgtttgtgcaaccccatgtagctgacatgattcggaacgccatctcagaattt
cgagatcagatttcttatgagaaacctacttga

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