Cucumis melo (muskmelon): 103491067
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Entry
103491067 CDS
T03195
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103491067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103491067
Spliceosome [BR:
cmo03041
]
Common components
Common spliceosomal components
SR proteins
103491067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_5
Nup35_RRM_2
RRM_Nup35
DUF2129
Motif
Other DBs
NCBI-GeneID:
103491067
NCBI-ProteinID:
XP_008449100
UniProt:
A0A1S4DXA1
LinkDB
All DBs
Position
6:complement(32156901..32173024)
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AA seq
374 aa
AA seq
DB search
MKPIFCGNFEYDARQPDLERLFSRYGKVDRVDMKSGFAFIYMEDERDAEDAIRALDRREF
GRKGRRLRVEWTKQERGIRRPGGGGGGGGGGGGSRRSSTNTRPSKTLFVINFDPYHTRTR
DLERHFDPYGKILSVRIRRNFAFVQYELQEDATRALELTNMSKLMDRVISVEYAVRDDDD
KRNGYSPDRNRDRSPDRKRRSPSPYRRERGSPDYGNGISRSPYRRQRASPDYGSRRSPSP
YQRERERGSPDYGRGRSPNHSPYRRERERSSDHVRGAPSNRPTHQRERPNDDRVPNRSPS
PYGREREKGSPTEGRGTSYSPRDRERSSNPDNGHDHGHDQQQNTVPEPGESPNYGDTQSP
KHRGYSSRSPQAEE
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaagccgattttttgtggaaacttcgagtatgatgctcgccagcctgatttggaaagg
ctgtttagtcgatatggaaaagttgatagagtggatatgaaatctggttttgcttttata
tatatggaggatgagagagatgctgaggatgccattcgtgcacttgatcggcgagaattt
ggccgaaagggtcgtagactacgtgttgagtggaccaaacaagagcgtgggattagaaga
ccaggtggaggtggtggtggaggtggaggaggaggaggttcaaggagatcctctactaat
acaagaccttcaaagactttgtttgttatcaactttgacccatatcatactagaacaagg
gatttagagaggcacttcgatccttatggtaagatattgagtgtaaggattcgaaggaat
tttgcatttgtccagtatgaattgcaggaggatgccactagagcattggagctgacaaac
atgagcaaattgatggatagagtgatttcagtggaatatgctgtcagagatgatgatgat
aagagaaatggatatagtcctgataggaatcgtgataggtctcctgataggaaaaggcga
tccccaagtccctatagaagagagcgaggaagccctgattatggaaatggtattagccgc
agtccatataggagacaaagagctagtcctgattatggtagccgtcgtagtccaagtcct
tatcagagagagagggagaggggttctcctgattatggtcgaggtcgtagtcccaatcat
agtccttataggagggagagagagagatcgagcgaccatgttaggggggcccccagcaat
agacctacccatcagagggaaagaccaaatgatgaccgagtccccaaccgaagtcctagt
ccttacgggagagagagggagaaggggagtcctactgaaggacgtggcactagctacagt
cctcgtgatagagagaggtcgtcaaaccctgacaatggtcatgatcatggccatgatcag
cagcagaacacggtacccgaacctggtgagagccccaattatggtgacacccagagcccg
aagcatcggggatatagcagccgttcacctcaagcagaggaatga
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integrated database retrieval system
