Cucumis melo (muskmelon): 103491070
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Entry
103491070 CDS
T03195
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like isoform X1
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103491070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103491070
03036 Chromosome and associated proteins [BR:
cmo03036
]
103491070
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103491070
Coactivators
SAGA/TFTC/STAGA complex
103491070
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103491070
STAGA complex
103491070
TFTC complex
103491070
SAGA complex
103491070
SLIK complex
103491070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
TFIID-31kDa
Histone
CEP76_N
Motif
Other DBs
NCBI-GeneID:
103491070
NCBI-ProteinID:
XP_008449110
UniProt:
A0A1S3BM78
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All DBs
Position
6:32195890..32200725
Genome browser
AA seq
554 aa
AA seq
DB search
MSVVPKESIEIVAQSIGISNLSPEVALALTPDVEYRVREIMQEAVKCMRHSKRTVLSSSD
VDNALKLRNLEPIYGFAACDSLRFKRAVGHKDLFYIDDKDVELNNVIESPLAKAAVDTSV
AAHWLAVEGVQPAVPESLLTEERTQLKPILQSYLDCLSILLVEPHDGKKSDLKEEELPYD
SKAPTKHVISRDLQLYFEKITGLILNKSGSILFREALRSLAVDSGIQPLLPYFTCFIADE
VSKNLCNCQLLIALMRMVWCLLRNPQIHMAPYLHQLMPSIITCLVAKQLGKRLSDNHWEL
RDLAASLVSLVCKRFGHVYHNIQPRVTKTLLHVFLDPSKLLPQHYGAVQGLADLGPDVVR
QFILPNLEPYMQYLEMEKQKNEMRRHEACQVYRTLLDAAGKCMHGWLKVFPLSLSPPMRS
TSKINANINEKVVKTISNKRKAILDNSVQQPALKKMATDNSLGAIPMNSMMVDMQGATTG
LPTPLGGSNIGVTRNFPNETRPGREGELGSKGSTALAVAWKEDLDAGPLITSLFQLFGED
LFSFIPKPELSFFL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttgttccgaaggaatcgattgaaatcgttgcgcagagcattgggatttctaac
ctttcccctgaggttgctcttgcactcactcccgatgtcgagtaccgggtccgtgaaatc
atgcaggaggcagttaaatgcatgcgtcactcaaagcgaactgttctctcttccagtgat
gttgataatgcacttaaattaagaaacttagagccaatatatggctttgctgcatgtgat
agtttgcggttcaaaagagctgttggacacaaggatctcttttacattgatgacaaggat
gtggagttaaataatgttattgagtcacctttagccaaagcagcggttgatacatcagtt
gctgctcactggctggcagttgaaggtgttcagcctgcagttccagagagcttgctgact
gaagaacgtactcaattaaagccaattctacaaagttatttggattgtttatccattttg
cttgtagaaccccatgatggaaagaaatccgacttgaaggaggaagaacttccttatgac
tctaaagcacctactaagcatgtgatttcaagggatcttcagctttacttcgagaaaata
actggccttatcttgaacaagtctgggtctattctatttagagaagctttaaggagcctg
gcagttgactcaggaattcagcctttgcttccatactttacttgcttcattgccgatgag
gtttcgaaaaatctatgtaattgtcaactcttgattgctttgatgaggatggtctggtgc
cttcttcgaaatccacagattcatatggcaccttatttacaccaattgatgccatccatc
attacctgccttgttgccaaacaattaggtaaaagattgtccgacaatcattgggagctt
agagacttagcagcaagcctggtttctttggtatgcaaaagatttggacatgtatatcac
aatattcaacctcgtgttacaaagactcttctccacgttttcttggacccctcaaaatta
ttgcctcagcattatggcgcagttcaggggctagcagatcttggtcctgatgtggttcgc
cagtttatactaccaaatcttgaaccttatatgcaatatttagagatggagaagcaaaag
aatgaaatgaggaggcatgaagcttgtcaagtttataggacgttactggatgcagctggt
aaatgtatgcatggttggttgaaggtttttccgctctctctatctccaccaatgcgtagt
acttcgaagataaatgcgaatatcaatgagaaagtggtgaagacaatttcaaataaacgc
aaagccattttggacaactcggtgcagcaaccagcactcaaaaagatggcaacagataac
tcattgggcgcaataccgatgaactccatgatggtcgatatgcaaggagccacaactggg
cttccaacaccacttggaggttcaaacatcggtgtcactcgaaatttcccaaacgaaacg
aggcctggtagggaaggtgaactaggatctaagggttctactgctcttgctgtagcatgg
aaagaggatttggatgctgggccattgataacttcgctttttcaactttttggggaagat
ctgttctccttcatcccaaaacccgagctatccttttttctgtga
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