Cucumis melo (muskmelon): 103491185
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Entry
103491185 CDS
T03195
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103491185
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103491185
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
103491185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
T2SSE
DEXQc_Suv3
AAA_19
Motif
Other DBs
NCBI-GeneID:
103491185
NCBI-ProteinID:
XP_016899361
UniProt:
A0A1S4DTP3
LinkDB
All DBs
Position
12:27763598..27789012
Genome browser
AA seq
2088 aa
AA seq
DB search
MLFQIPRLTSSLREPFDVDQAYLHRKLLLQNHKPTHSVASSGESELARKIVYQWDEASFE
IRQAYKQFIAGVVGLVDREVPSEELGEVALTIYRLFGEKNEENDLDCAAKNMEELQKLIG
NTVSGARLQKVISLAQKLFILQPRDHATALLAEKHVNKGDSNVEFGADLAFREPTRFLVD
MSLENSDLLGMDSTAPTFYDRQHVHDDSINFDLSNEKGKLNLSWLRDACGEITKKSTSQL
SLDELAMAICRVLHSEKPGEEIAGDLLDLVGDGAFEFVQDLISHRRELVDDINHGLTIIK
SEKTNSSSQSRMPSYGTQVTVQTESERQIDKLRRKEEKKNKRGIEYGSESDFSAISFSSL
VQASQRKSPFDDLIGSGEGTNSLTVSALPQGTQRKHFKGYEEVIIPAIPAAQMKPGEKLI
EIKELDDFAQAAFRGFKYLNRIQSRIFDTVYNTNENILVCAPTGAGKTNIAMISILHEIS
QHFKDGYLHKDEFKIVYVAPMKALAAEVTSTFSHRLSPLNVTVRELTGDMQLSKNELEET
QMIVTTPEKWDVITRKSSDMSLSMLVKLLIIDEVHLLNDDRGPVIEALVARTLRQVESTQ
TMIRIVGLSATLPNYLEVAQFLRVNSGTGLFFFDSSYRPVPLAQQYIGISEHNFAARNEL
LNEICYKKVVDALKHGHQAMVFVHSRKDTAKTAEKLVEIGRKYDDLELFKNDAHPQFGII
KKEVIKSRNKDLVELFNFGIGVHHAGMLRSDRGLTERLFSDGLLKVLVCTATLAWGVNLP
AHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIITSHDKLAHYLRL
LTSQLPIESQFIGSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMRLNPLAYGIGWDE
VMADPSLSSKQRALITDAARALDKSKMMRFDEKSGNFYCTELGRIASHFYIQYSSVETYN
EMLRRHMNDSEIIDMVAHSSEFENIVVRDEEQSELEMSVRTSCPLEVKGGPSNKHGKISI
LIQLYISRGSIDTFSLVSDAAYISASLARIMRALFEICLRRGWCEMTLFMLEYCKAVDRR
IWPHQHPLRQFDKDLSSDILRKLEEREADLDRLQEMEEKDIGALIRYAPGGRLVKQYLGY
FPLIQLSATVSPITRTVLKVEVLITADFIWKDRFHGGSQRWWILVEDNENDHIYHSELFT
LAKKKAREPQRLSFTVPIFEPHPPQYYIHAVSDSWLQAEAFYTISFQNLALPEARTSHTE
LLDLKPLPITALGNRSYESLYKFSHFNPIQTQIFHVLYHSDDNILLGAPTGSGKTISAEL
AMLRLFNTQPEMKVVYIAPLKAIVRERMNDWKNCLVSRLGKKMVEMTGDYTPDLMALLSA
DIIISTPEKWDGISRNWHSRSYVTKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQTE
RKVRFVGLSTALANASDLGDWLGVGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMNSM
NKPTYAAICTHSPTKPVLIFVSSRRQTRLTALDLIQFAASDEHPRQFLNMPEEELQMILC
QVTDQNLRHTLQFGIGLHHAGLNDGDRSMVEELFANNKIQVLVCTSTLAWGVNLPAHLVI
IKGTEYYDGKSKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYEPF
PVESSLKEQLHDHINAEIVSGTICHKEDAVHYLSWTYLFRRLMVNPAYYGLDSMEPEILS
SYLSRLVQSTFEDLEDSGCIKMEEDSVEPMMLGSIASQYYLSYITLSMFGSNIGPDTSLE
VFLHILSAASEYDELPVRHNEENYNGALSERVRYKVDKDRLDDPHVKANLLFQAHFSQLE
LPISDYVTDLKSVLDQSIRIIQAMIDICANSGWLSSSITCMRLLQMVMQGLWFDVDSALW
MLPCMNDDLASSLKKSGYLTLQQLLDLPKTALQNLIGNFPASKLTQDLQIFPRVQMKIKL
QRKDDDVEKAPSLSIRLEKISSRKNKTRAYAPRFPKIKDEAWWLVLGNTSTSELYALKRV
SFSDRLVTTMQLPPERNDFQEMQLILVSDCYLGYEQEYSIKELINGSS
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttcagattccccgattgaccagctctctcagggagccattcgatgtcgatcag
gcgtatctccatcgcaagctccttcttcagaatcacaaaccgacccactccgtagcttca
tcaggcgagtcagagctagcgcggaagatagtttatcaatgggacgaagcatcctttgaa
attcgacaagcctataagcagttcattgcgggagttgttgggttggtggacagagaagta
ccatccgaggaacttggtgaggtagctctgactatttatcgcctttttggcgagaaaaat
gaagaaaatgatctcgactgtgctgctaaaaacatggaagaattgcaaaagcttattggc
aatacagtttcaggtgctaggctgcagaaagttatttctctagctcagaagctatttatt
ttgcagccaagggaccatgcaactgcattgctggcagagaagcatgttaacaagggtgac
tccaatgttgagtttggtgctgatcttgcttttagagaacctactaggtttctggtggac
atgtctctggaaaattcagatttactgggcatggatagtactgcacctacattttatgac
agacaacatgtgcatgatgattccataaactttgatctctctaatgaaaaaggaaagtta
aatttgagttggttgagggatgcatgtggcgagataacaaaaaaaagtacctcacaactt
tctcttgatgaacttgcaatggccatttgccgagttcttcattcagaaaaacctggcgag
gagatagctggagatctattggatcttgttggtgatggagcatttgagtttgttcaagat
cttatttcacaccgaagggaacttgttgatgatattaatcatggattaacaataataaaa
tccgagaaaacaaattcaagctcacaatcacgaatgcctagctatggaactcaggttact
gttcaaacagaatcagagagacaaattgataagcttcgacgtaaggaggaaaagaaaaat
aaacgaggaattgaatatggttctgaaagtgatttctctgctataagcttttcttctcta
gttcaagcaagtcaaaggaaaagtccatttgacgatcttattggatctggtgagggcact
aactcccttacggttagtgcccttcctcaaggaacacaaaggaagcattttaagggatac
gaggaggtaattatccctgcaatcccagcagcgcaaatgaaacctggagaaaagctgatt
gaaataaaggaattggatgattttgctcaagctgcctttcgcggattcaaatacttaaat
cgtatacagagtcgcatttttgatactgtttataacaccaatgagaatatactagtctgc
gctccaacaggggctgggaaaaccaatatagccatgatctccattctccacgagatttca
cagcactttaaggatggatatttgcataaagatgaatttaagatagtttatgttgctcct
atgaaggcgttggctgcagaggtcacatctacttttagccatcgtttatcacctttgaat
gttactgtaagagaactaactggagacatgcaactttcgaagaatgaacttgaagaaact
cagatgatagtgacaacacctgagaaatgggatgtcattactcgcaaaagcagtgacatg
tcactgtcgatgttagtcaaactcttaatcattgatgaggtacatcttctaaatgatgac
cgagggccggtaattgaggcactagttgcacgaactcttcgtcaggtggagtcaacacaa
acaatgatacgtattgttggcctttcagccaccctccctaattacttagaggttgcacag
tttcttagagtgaattcaggaacaggacttttcttctttgattctagctaccgtcctgtg
cctcttgcacaacaatatattggcatcagtgagcataactttgcagctcgcaatgaattg
ttaaatgaaatatgctacaagaaggttgttgatgcattaaagcatgggcatcaagcaatg
gtgtttgttcattctcgaaaggacacagcaaagacagcagagaaactggtcgaaattggt
cgaaagtacgatgatcttgagctatttaagaatgatgcgcacccacaatttggtattatc
aagaaagaagtcatcaaatccaggaataaagatctagtagaactttttaattttggaatt
ggtgtgcatcatgctggaatgctacgctctgatagaggtttaactgaaaggcttttctca
gatggattgttgaaggttcttgtttgtacagccaccttagcatggggtgtaaatctgcct
gctcatacggttgttataaagggcactcaattgtatgatccaaaagctggtggatggcga
gatttgggtatgcttgatgtcatgcagatttttggacgagctgggagacctcagttcgac
aaaagtggtgaaggcatcataattacgtctcatgataagcttgcccattatctgcgattg
cttacaagtcagctccccatagagagtcagtttattggttctttgaaagataatttgaat
gcggaggttgcactgggtactgtaacaaatgtgaaagaagcttgtgcttggcttggatat
acatatctatttataaggatgagactaaatcctctggcatatggcattggatgggatgag
gtcatggctgatccatctttaagttcaaagcaaagagctctcataactgatgctgcacgt
gcacttgacaaatcaaagatgatgcgctttgatgaaaaaagcggcaacttttattgtaca
gagctcggccgcattgccagccacttctatattcagtattccagtgttgaaacatataat
gagatgttgagacgtcatatgaatgacagtgagattattgacatggttgctcattcttct
gagtttgaaaatattgttgttcgagatgaggagcagagtgagctggagatgtcggtacga
acatcatgccccttggaagttaaaggtggcccatcaaataaacatggaaaaatttccatc
ctaattcagttgtacatttccagaggttccattgacaccttctctctagtctccgatgct
gcttatataagtgctagcttggctcgtattatgcgagctctatttgaaatatgtttgaga
aggggttggtgcgaaatgactttgttcatgttggaatactgcaaagctgttgatcgtcga
atatggccacaccagcatcctctaagacaatttgacaaggatctttcttcagatatattg
cgcaagcttgaggagagagaggctgacttggatcgtctacaggagatggaggaaaaagat
ataggagcattgattcgttatgcacctggtggaagattggttaagcagtacttgggatat
tttccactaattcagttatcagcaactgtcagtccaataacaagaaccgtcctaaaggtt
gaggtgctcataacagccgacttcatatggaaagatcgttttcatggtggttctcaacgc
tggtggatactagttgaggacaacgagaatgaccatatctatcactctgagcttttcact
ctggcaaagaagaaggctagagagcctcaaaggctttccttcacagtcccaatatttgag
ccacatccacctcaatattatattcatgccgtttctgactcttggctgcaagcagaagca
ttttacaccatatctttccaaaacttagcactaccggaggcccgtacatcacacactgag
ctcctagacttaaagcctcttccaataactgctcttggtaacagaagttacgaatccctg
tataaattttcacattttaatccaatacaaacacagatttttcatgtgttgtatcattcc
gatgataacattctgttgggagctcccactggcagtggaaaaaccatatctgctgaactt
gctatgcttcgtctcttcaatactcagcctgaaatgaaggttgtctacatagcacctctg
aaggccattgtccgtgaaagaatgaatgactggaaaaattgtcttgtttctcggctcggc
aaaaaaatggttgaaatgaccggagattatacccctgatctgatggcacttttatcagca
gatattattatatcaaccccggaaaagtgggatggtattagtagaaattggcacagtcga
agctatgttacaaaggttggactaatgattctggatgagattcacttactgggagcagat
cgaggtcccattcttgaggttattgtttcaaggatgaggtatatatcatcacagactgag
cgaaaagttagatttgtaggcctttcaactgctttagcgaatgcaagcgatttgggtgac
tggttaggtgtgggagaaaatggacttttcaatttcaaaccaagtgtaagaccggtacct
cttgaagttcatatccagggatatcctggaaagttctactgtcctagaatgaacagtatg
aataaaccaacgtatgcagccatctgcacccattcaccaaccaagccagttcttatattt
gtctcatctcgtcgtcagacacgactcaccgcattggaccttattcagtttgcagcttca
gacgaacatccaaggcaatttcttaatatgcccgaagaagagcttcagatgatcctttgt
caagttactgatcaaaatctcaggcacaccttgcagtttggtatcgggctacaccatgca
ggtctaaatgatggggataggtctatggttgaggaactgtttgcaaacaacaaaattcag
gtattggtttgtactagtacattagcttggggtgtgaaccttcctgcacatctagttatt
atcaagggaacagaatattatgatggaaaatcaaagagatacgttgactttccaatcaca
gatattctgcaaatgatgggtcgtgcaggtcgaccacagtatgatcaacatggaaaagca
gttattcttgttcatgaacccaaaaagagcttttataagaagtttttgtacgaaccattc
cctgttgagagtagtctgaaggagcagttgcatgaccatatcaatgctgagatagtttcg
ggcaccatttgtcataaagaagatgcagtgcactatcttagctggacctatttgtttcgt
aggctgatggtaaatcctgcttactatgggttggatagtatggaacctgaaattctaagt
tcgtacttgtctaggttagtacaaagcacatttgaggatcttgaggatagtggatgcata
aagatggaggaagacagtgtggagccaatgatgttgggctcaatagcatctcagtattac
ctcagctacattactttatcaatgttcggctcaaatataggtccagatacgtcacttgaa
gtatttttgcacatcctttctgctgcttctgaatatgatgaacttcctgtgcggcataat
gaggaaaattacaatggtgctctatccgagagggttcgatataaggtggacaaagatcgt
cttgatgatccacatgtgaaggcaaatttactttttcaggcacatttttctcagttggaa
ttaccaatcagtgactacgttaccgacttaaagtcggtgttggatcaaagtattcgcatt
attcaggccatgattgatatatgtgccaacagtggatggttatcaagctcgattacatgc
atgcgtctattacaaatggtcatgcagggcttgtggttcgatgtggattcggcattgtgg
atgttaccatgcatgaatgatgacctcgcaagttcacttaaaaaatcgggatatctaact
ctgcagcaactgttggatcttcccaagacagctttgcaaaatttgattggaaattttcct
gcttcaaaattaactcaggacttgcagatttttcctcgtgtccaaatgaagataaaactt
caaaggaaggacgatgacgttgaaaaggctccctcacttagcattagattggagaagata
agttcgaggaaaaacaaaaccagggcatatgcaccacggtttcccaagataaaagatgaa
gcatggtggcttgtacttggtaacacctctacgtcggaactgtatgctttaaaaagagtt
tctttctctgatcgcttggtcacaaccatgcagttaccgccagaaagaaatgatttccag
gaaatgcaattgattttggtctcagattgttatcttggctatgagcaagaatactccatt
aaagaactgataaatggaagcagttga
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integrated database retrieval system
