Cucumis melo (muskmelon): 103491293
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Entry
103491293 CDS
T03195
Name
(RefSeq) transcription initiation factor TFIID subunit 6-like
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103491293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103491293
03036 Chromosome and associated proteins [BR:
cmo03036
]
103491293
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
103491293
Coactivators
SAGA/TFTC/STAGA complex
103491293
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
103491293
STAGA complex
103491293
TFTC complex
103491293
SAGA complex
103491293
SLIK complex
103491293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
CBFD_NFYB_HMF
TFIID-31kDa
Motif
Other DBs
NCBI-GeneID:
103491293
NCBI-ProteinID:
XP_008449395
UniProt:
A0A1S4DXQ6
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All DBs
Position
5:complement(3389572..3398621)
Genome browser
AA seq
543 aa
AA seq
DB search
MSIIPKENIEVIAQCIGINNLSSDVALDIAPDVEYRLREIMQEAIKCMRHSKRTTLTADD
VDGALNLRNVEPMYGFSSGGLLRFRRAIGHRDLFYLEDKDLEFKEIIDAPLPKAPLDTAV
FCHWLAIEGVQPAIPENAPVEVILPPSDAKSNEQMGGLPVDIKLPVKHILSKELQLYFDK
ITELVVSKSSSILFKKALVSLATDSGLHPLVPYFTCFIADEVARGLGDYSLLFALMRVVW
SLLQNPHIHIEPYLHQMMPSVVTCLVAKRLGNRFSDNHWELRDFTAKVVALICKRFGHVY
NTLQTKLTKTLLNAFLDPKRALTQHYGAIQGLAALGMNVVHLLILPNLEPYLGLLEPEML
LANQKNEMKRHEAWRVYGALLRAVGQCIYDRVKIFPPLPSMPAGSILRTNARVITTTFPN
KRKANADHIRGQAPLKKMVMDSPMGVMPTNSSASHMEGAVNPASSGNSSLVLPTSSQPLQ
NEIIPGSTSRKGKCDDQILKRSAVLSQVWKEDLKSGKLLTSMLDLFGESMLCFIPAPELS
MFL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgagtattatacctaaagaaaatattgaggtcattgcgcaatgtattgggatcaataac
ttgtcctcggatgttgctttggatattgctcccgatgttgaatatcgtctgcgggagatc
atgcaggaggccatcaaatgcatgcgtcactctaagagaactacgttgacagcggatgat
gttgatggtgcactaaacctaagaaatgttgagccaatgtatggtttttcttctggaggt
ctcttgcgatttagaagagccattggacatcgggatctgttttaccttgaagacaaggat
ctggaatttaaagagataattgatgctccactgccaaaagctcctcttgatactgcagtg
ttttgccattggctagcaatcgaaggtgtacagcctgcaattcccgaaaatgctcctgta
gaagtaattttacctccttctgatgccaaaagtaatgaacaaatgggtgggttgcctgtt
gacattaaattaccagttaagcatattctgtccaaggagcttcagctatattttgacaaa
atcacggagcttgttgttagtaagtcaagctcaattctatttaagaaggcactagtgagt
ttagctacggactcgggacttcaccctttggttccttattttacgtgctttatagctgat
gaggttgcacgtggactcggtgattattcccttctttttgctttaatgcgtgttgtctgg
agtcttcttcagaatcctcacatccacatagaaccttatctacaccaaatgatgccatcg
gttgtaacctgcctagttgcaaaaaggttggggaacaggttttcagacaaccactgggaa
cttagagacttcacagcgaaagtggttgctttaatctgtaaaaggtttggtcatgtttac
aacacacttcagacgaagctcacaaaaactcttctcaatgcatttctagaccccaaacgg
gctttgactcaacattatggtgcaattcaaggattagcagccttggggatgaatgtggtt
cacctccttatacttccaaatcttgagccatatctgggacttttggaacctgaaatgctt
cttgctaatcaaaagaatgagatgaagaggcatgaagcctggcgcgtttatggagccttg
ctgcgagcggttggtcaatgcatttatgatcgtgtcaagatttttcctcctttgcctagt
atgcctgcaggttctatcttgcggacgaatgctagagttatcaccaccacattcccaaac
aaacgcaaggcaaatgccgaccacataagagggcaggctccccttaagaagatggtaatg
gatagtccaatgggtgtcatgccaactaattcatctgcatcacacatggaaggagcagtt
aatccagcttcttccggcaattccagtctggttttgccgacatcttctcaaccattgcaa
aatgaaatcattccaggcagcactagtaggaaaggcaagtgtgatgatcaaattcttaaa
aggtcagctgtcttatctcaagtctggaaggaggatcttaaatctggaaagttgttaaca
tccatgttagatttgtttggtgaaagtatgttatgcttcattcctgctcctgaattgtcc
atgtttttgtaa
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