KEGG   Cucumis melo (muskmelon): 103491443
Entry
103491443         CDS       T03195                                 
Name
(RefSeq) replication factor C subunit 1
  KO
K10754  replication factor C subunit 1
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03030  DNA replication
cmo03410  Base excision repair
cmo03420  Nucleotide excision repair
cmo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103491443
   03410 Base excision repair
    103491443
   03420 Nucleotide excision repair
    103491443
   03430 Mismatch repair
    103491443
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cmo03032]
    103491443
   03400 DNA repair and recombination proteins [BR:cmo03400]
    103491443
DNA replication proteins [BR:cmo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103491443
DNA repair and recombination proteins [BR:cmo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103491443
SSDB
Motif
Pfam: RFC1 BRCT AAA AAA_22 RCF1-5-like_lid PTCB-BRCT Rad17 AAA_19 AAA_30 Sigma54_activ_2 AAA_assoc_2 BRCT_2 nSTAND3 RuvB_N AAA_5 AAA_18 RsgA_GTPase Zeta_toxin AAA_24 AAA_17 Gp44_lid AAA_33 AAA_14 AAA_28 DUF7197 DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 103491443
NCBI-ProteinID: XP_008449609
UniProt: A0A1S3BLT1
LinkDB
Position
5:complement(1624817..1637203)
AA seq 973 aa
MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF
ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDNDDD
AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG
SSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG
KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK
YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG
KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP
KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS
FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD
DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR
PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG
QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF
LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA
LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS
VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK
SGRGSGSATKRKR
NT seq 2922 nt   +upstreamnt  +downstreamnt
atgggggatattagaaaatggttcatgaaagcacacgacaaagacaacggcagtgggtca
aagaaagcaaaacctgctccaagcagcttagagaaatccatttcagctgaactacagtcc
ggaaaaacagggccaagtggtggagaaagtactggcagacggataactagcaagtatttt
gcatcagagaagcagaaggccaaggatacagaagaaacagaggtacccccgatcatagga
aagtccccacaggatactaaggaatcaccagccaaaagaaagtttcaaaagtataatggg
gaatcaccgaaagcttcacctctaaaaaaatcaaacaaaattgatgacaacgatgatgat
gctgttctttgtagttctaaaaagaacatgtctgaagtcactcccaacaaaaagttgaag
agtggttctggaaagggaattacacagaaacctgttgaaatggaagcgagtgatgatgag
gaaaccaagggcaccgattcttctctaaagccaagtggaaggggtaggggtggaagaggt
tcgtctgctgcaaccattggtggtagaggcagaggtggtggtgggcggggtggatttatg
aattttggggaaaggaaagatcctccacacaaaggggaaaaggaagtccctgaaggtgct
ccggactgtttagccggtttaacttttgtaattagtggaacccttgacagtctggaacga
gaagaagcagaagatttgattaaacgccatggtggccgagtaactggatctgtcagcaaa
aaaacaaattatctactatgtgatgaagatattggtggccgaaaatcgtcaaaagcaaaa
gagctgggaactggttttctcactgaggatggcttgtttgacatgatccgtgcatctggc
aaaaaagctcctcctaggcaagatcctaaaaaatctatggttaaatctgaggaatctccg
acggagaaaaaattccagaaagtacaagcaaaatcccacaaagatttgactgctggtgct
tcacctgctaagcaaaaaagccgaacagctgagttctctaacctaacatggacagaaaaa
tataggcccaaggttccaaatgacattatagggaatcagtcactggtcaaacaacttcat
gattggttggcacattggaacgaaaacttcctagatgttggaagcaaaaagaaggttaaa
aaggccagtgattctggtgcgaaaaaagctgtcttgttatgtggaggtcctggcataggt
aaaactacatcggctaagttggttagccagatgcttggttttgaggctatagaggtaaat
gccagcgacaataggggtaaatcagatgccaaaattcaaaagggaattggtggaagcaat
gcaaattctataaaggagcttatcagcaatgaatcacttcatttcaaaatggatcagcca
aaacatcacaaaactgtgttgatcatggatgaggtagatggaatgtctgctggagatagg
ggtggagttgctgatctgattgcgagcattaagatgtccaaaattccaattatctgcatc
tgtaatgaccgttacagccagaaactgaaaagccttgtgaactattgtcttattctcagc
tttaggaaacctacaaaacaacagatggcaaaaagattgattcaagttgcaaatgcagaa
ggccttcaagttaatgagattgctcttgaggaacttgcagaaagagtaaatggggatatg
cgtatggcactaaatcagttgcagtacctgagtctgtctatgtcagttattaaatatgat
gatattcggcaacggcttctgagcagtaggaaagatgaagacatctcacccttcactgct
gttgataagctgtttggttttaattctgggaagttaaggatggatgaacggattgatctc
agcatgagtgatcttgatctagtccctcttcttattcaggaaaattatattaattatagg
ccaagtggtgttagcaaggatgacaatgggatcaaacggatggatttgattgcccgtgca
gctgaatcaattgcagatggggatataatcaatgtacagattcgaaggcatcgacagtgg
caactttctcaaagtagttgtattgcttcttgtataatcccagcttcgttattgcatggg
caaagagaaacgcttgagcagtttgagcgtaattttaatagatttggtgcatggctggga
aagaattccacatttggaaaaaatatgagacttttggaggatttgcatgttcacattctt
gcttctcgcgaatcctgttcagggagggaacacctacgagttgagaaccttactctgttt
ctaaagaggttgactgaaccactgcacacgctgcctaaggatgaggctgttaaaacagtg
gttgaatttatgagcctatactcaatcagtcaggaggattttgatactgttcttgagttg
tcaaaatttcagggtcgtaagaatccactagatggagttgcccccgcagtcaaagctgct
ctaaccaaggcatacaaagaagcaagcaagacacacatggtgcgggctgcagatcttatt
acacttcctggaatgaaaaaagcccccaagaagcgaattgcagcaattctagaacctact
gaggatactgttgaaggtgctgggggagagacattggtggaaagtgatgatgaaaactct
gtggacaatgagggcgaagaaaactccacaaatggtgagaagctgcaattagaacttcaa
agcttgaacaagaaaggaatgcaagtgcaattggatttgaagggtgtggaagattcaagc
gccaagaaatccggtggcagaggaagaggaggtagaacttcccaggcttcagagaagaaa
agtggtcgaggttcaggatctgccacaaagaggaaaagatga

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