Cucumis melo (muskmelon): 103491443
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Entry
103491443 CDS
T03195
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03030
DNA replication
cmo03410
Base excision repair
cmo03420
Nucleotide excision repair
cmo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103491443
03410 Base excision repair
103491443
03420 Nucleotide excision repair
103491443
03430 Mismatch repair
103491443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cmo03032
]
103491443
03400 DNA repair and recombination proteins [BR:
cmo03400
]
103491443
DNA replication proteins [BR:
cmo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103491443
DNA repair and recombination proteins [BR:
cmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103491443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
RCF1-5-like_lid
PTCB-BRCT
Rad17
AAA_19
AAA_30
Sigma54_activ_2
AAA_assoc_2
BRCT_2
nSTAND3
RuvB_N
AAA_5
AAA_18
RsgA_GTPase
Zeta_toxin
AAA_24
AAA_17
Gp44_lid
AAA_33
AAA_14
AAA_28
DUF7197
DNAX_ATPase_lid
Motif
Other DBs
NCBI-GeneID:
103491443
NCBI-ProteinID:
XP_008449609
UniProt:
A0A1S3BLT1
LinkDB
All DBs
Position
5:complement(1624817..1637203)
Genome browser
AA seq
973 aa
AA seq
DB search
MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSISAELQSGKTGPSGGESTGRRITSKYF
ASEKQKAKDTEETEVPPIIGKSPQDTKESPAKRKFQKYNGESPKASPLKKSNKIDDNDDD
AVLCSSKKNMSEVTPNKKLKSGSGKGITQKPVEMEASDDEETKGTDSSLKPSGRGRGGRG
SSAATIGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLER
EEAEDLIKRHGGRVTGSVSKKTNYLLCDEDIGGRKSSKAKELGTGFLTEDGLFDMIRASG
KKAPPRQDPKKSMVKSEESPTEKKFQKVQAKSHKDLTAGASPAKQKSRTAEFSNLTWTEK
YRPKVPNDIIGNQSLVKQLHDWLAHWNENFLDVGSKKKVKKASDSGAKKAVLLCGGPGIG
KTTSAKLVSQMLGFEAIEVNASDNRGKSDAKIQKGIGGSNANSIKELISNESLHFKMDQP
KHHKTVLIMDEVDGMSAGDRGGVADLIASIKMSKIPIICICNDRYSQKLKSLVNYCLILS
FRKPTKQQMAKRLIQVANAEGLQVNEIALEELAERVNGDMRMALNQLQYLSLSMSVIKYD
DIRQRLLSSRKDEDISPFTAVDKLFGFNSGKLRMDERIDLSMSDLDLVPLLIQENYINYR
PSGVSKDDNGIKRMDLIARAAESIADGDIINVQIRRHRQWQLSQSSCIASCIIPASLLHG
QRETLEQFERNFNRFGAWLGKNSTFGKNMRLLEDLHVHILASRESCSGREHLRVENLTLF
LKRLTEPLHTLPKDEAVKTVVEFMSLYSISQEDFDTVLELSKFQGRKNPLDGVAPAVKAA
LTKAYKEASKTHMVRAADLITLPGMKKAPKKRIAAILEPTEDTVEGAGGETLVESDDENS
VDNEGEENSTNGEKLQLELQSLNKKGMQVQLDLKGVEDSSAKKSGGRGRGGRTSQASEKK
SGRGSGSATKRKR
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgggggatattagaaaatggttcatgaaagcacacgacaaagacaacggcagtgggtca
aagaaagcaaaacctgctccaagcagcttagagaaatccatttcagctgaactacagtcc
ggaaaaacagggccaagtggtggagaaagtactggcagacggataactagcaagtatttt
gcatcagagaagcagaaggccaaggatacagaagaaacagaggtacccccgatcatagga
aagtccccacaggatactaaggaatcaccagccaaaagaaagtttcaaaagtataatggg
gaatcaccgaaagcttcacctctaaaaaaatcaaacaaaattgatgacaacgatgatgat
gctgttctttgtagttctaaaaagaacatgtctgaagtcactcccaacaaaaagttgaag
agtggttctggaaagggaattacacagaaacctgttgaaatggaagcgagtgatgatgag
gaaaccaagggcaccgattcttctctaaagccaagtggaaggggtaggggtggaagaggt
tcgtctgctgcaaccattggtggtagaggcagaggtggtggtgggcggggtggatttatg
aattttggggaaaggaaagatcctccacacaaaggggaaaaggaagtccctgaaggtgct
ccggactgtttagccggtttaacttttgtaattagtggaacccttgacagtctggaacga
gaagaagcagaagatttgattaaacgccatggtggccgagtaactggatctgtcagcaaa
aaaacaaattatctactatgtgatgaagatattggtggccgaaaatcgtcaaaagcaaaa
gagctgggaactggttttctcactgaggatggcttgtttgacatgatccgtgcatctggc
aaaaaagctcctcctaggcaagatcctaaaaaatctatggttaaatctgaggaatctccg
acggagaaaaaattccagaaagtacaagcaaaatcccacaaagatttgactgctggtgct
tcacctgctaagcaaaaaagccgaacagctgagttctctaacctaacatggacagaaaaa
tataggcccaaggttccaaatgacattatagggaatcagtcactggtcaaacaacttcat
gattggttggcacattggaacgaaaacttcctagatgttggaagcaaaaagaaggttaaa
aaggccagtgattctggtgcgaaaaaagctgtcttgttatgtggaggtcctggcataggt
aaaactacatcggctaagttggttagccagatgcttggttttgaggctatagaggtaaat
gccagcgacaataggggtaaatcagatgccaaaattcaaaagggaattggtggaagcaat
gcaaattctataaaggagcttatcagcaatgaatcacttcatttcaaaatggatcagcca
aaacatcacaaaactgtgttgatcatggatgaggtagatggaatgtctgctggagatagg
ggtggagttgctgatctgattgcgagcattaagatgtccaaaattccaattatctgcatc
tgtaatgaccgttacagccagaaactgaaaagccttgtgaactattgtcttattctcagc
tttaggaaacctacaaaacaacagatggcaaaaagattgattcaagttgcaaatgcagaa
ggccttcaagttaatgagattgctcttgaggaacttgcagaaagagtaaatggggatatg
cgtatggcactaaatcagttgcagtacctgagtctgtctatgtcagttattaaatatgat
gatattcggcaacggcttctgagcagtaggaaagatgaagacatctcacccttcactgct
gttgataagctgtttggttttaattctgggaagttaaggatggatgaacggattgatctc
agcatgagtgatcttgatctagtccctcttcttattcaggaaaattatattaattatagg
ccaagtggtgttagcaaggatgacaatgggatcaaacggatggatttgattgcccgtgca
gctgaatcaattgcagatggggatataatcaatgtacagattcgaaggcatcgacagtgg
caactttctcaaagtagttgtattgcttcttgtataatcccagcttcgttattgcatggg
caaagagaaacgcttgagcagtttgagcgtaattttaatagatttggtgcatggctggga
aagaattccacatttggaaaaaatatgagacttttggaggatttgcatgttcacattctt
gcttctcgcgaatcctgttcagggagggaacacctacgagttgagaaccttactctgttt
ctaaagaggttgactgaaccactgcacacgctgcctaaggatgaggctgttaaaacagtg
gttgaatttatgagcctatactcaatcagtcaggaggattttgatactgttcttgagttg
tcaaaatttcagggtcgtaagaatccactagatggagttgcccccgcagtcaaagctgct
ctaaccaaggcatacaaagaagcaagcaagacacacatggtgcgggctgcagatcttatt
acacttcctggaatgaaaaaagcccccaagaagcgaattgcagcaattctagaacctact
gaggatactgttgaaggtgctgggggagagacattggtggaaagtgatgatgaaaactct
gtggacaatgagggcgaagaaaactccacaaatggtgagaagctgcaattagaacttcaa
agcttgaacaagaaaggaatgcaagtgcaattggatttgaagggtgtggaagattcaagc
gccaagaaatccggtggcagaggaagaggaggtagaacttcccaggcttcagagaagaaa
agtggtcgaggttcaggatctgccacaaagaggaaaagatga
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