Cucumis melo (muskmelon): 103491446
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Entry
103491446 CDS
T03195
Name
(RefSeq) nuclear pore complex protein NUP96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103491446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103491446
03036 Chromosome and associated proteins [BR:
cmo03036
]
103491446
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103491446
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103491446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Duc1_FFAT_like
Motif
Other DBs
NCBI-GeneID:
103491446
NCBI-ProteinID:
XP_008449614
UniProt:
A0A1S3BNC9
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All DBs
Position
5:complement(1587678..1595688)
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AA seq
1067 aa
AA seq
DB search
MASSSCLPLVSENFCEDYDARSYLSPLRPDLDATTSEDQATTQHKRRKIASDADFSSHDD
LKELKNSFPTLQSPDYYMSPNLEEMSIHVLKDPNYTSQVLDFTIGRCGYGSVKFLGKTDV
RWLDLDQIVKFHKNEVIVYEDETTKPIAGQGLNKPAEVTLVLQSITTSSLGRQFDNVVKK
LKYFTERQGAHFISFEPENCEWKFSVNHFSRFGLTEDEEEDIVMDDPNAVQEPAEINCNE
ISENNENSPMDFTESVLCHSLPAHLGLDPLKMKEMRMVIFPENEQEFEDYNESPKFQKSF
TGREYMRTPFKDSSQRTNQKLNSLVVRKTPLALLEYNQGSLDSNSPGSILMSQPKKVTPV
KRSKAEGFKLDLTHETPITLDHSCNIVDAGLFMGRSFRVGWGPNGILVHNGNLVGSKNSQ
RVLSSIINVEKVSIDNVVRDENSKMRKELIEFAFDLPLNLHKEMNHEFEEEVGSFNLKLQ
KIVFNRLMLSDICRGYIDIVEKQLEVPGLSSSTRLVLTHQIMVWELIKVLFSERENVGNS
FDDDNEEDMMQDIKEDSPEFDLEALPLIRRAEFSCWLQESVFPQVQYDLGSLKDSSYLEH
IFLLMTGRQLDAAVQLASSKGDVRLACLLSQAGGFTVGSTVKRNDVALQLDIWRRNGLDF
NFIEKERTQLYELLAGNIFDALHDFDLDWKRFLGLLMWYRLPPDTTLPVIFHSYQHLLKS
GRAPLPVPVYADGPQELALKSNTNECLDLSYFLMLLHANEDPEFGFLKTMFSAFSSTDDP
LDYHMIWHQRAVLEAIGAISYKDLHILDMGFVSQLLCLGQCHWAIYVVLHMPFRDDFPHL
QAKVIKEILFQYCEIWSSQESQFEFIENLGVPRIWLHEAMAVFFSYLGNLPEALEHFIEC
RNWHKAHTIFTTSVAHKLFLSAEHSDVWKFATSMEMHKSEIENWEFGAGIYISFYSLRSS
LQENTEGSVLDSLESRNVACGEFIGRLNESLAVWGDRLPVEARVVYSKMAEEISRLLLSD
IGEGSTRDAQLSCFDTIFSAPMREDLRSSHLQDAVSLFTCYLSEISS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcctcttgtcttcctttggtttctgagaatttctgtgaagattatgatgca
agaagctacctatcacccttgaggccggatcttgatgctacgacctctgaagatcaagct
actacacagcacaagagaagaaaaattgcctctgatgctgatttttcatctcatgatgat
ttgaaggagctcaaaaattcctttccgacattgcagtctcctgattattatatgtctcca
aacttggaggagatgtctatccatgttctgaaagatcccaattatactagccaagtgtta
gattttacaataggacgttgtggttatggatctgttaagtttttggggaagactgacgtt
agatggttagatttagaccaaattgtcaagtttcataagaatgaagtaattgtgtatgaa
gatgaaactaccaagcctattgctggtcaaggccttaacaagcctgctgaagttactttg
gttctccagtcaataacaaccagctctttagggaggcaatttgataatgttgtgaagaaa
ttgaaatactttactgagagacagggagctcacttcatttcatttgaaccagaaaattgt
gaatggaagttctcagttaaccatttcagccggtttggcttgacagaagatgaagaagaa
gatattgtaatggacgatcctaatgcagtgcaagaacctgcagaaatcaactgcaacgag
atatctgaaaataatgaaaacagccctatggacttcaccgaatctgtgctttgtcattcc
cttcccgcacatcttgggcttgatccattaaagatgaaagaaatgagaatggttatattt
cctgaaaacgagcaggaatttgaggattataatgaatcccctaaatttcaaaaatcattc
acaggtagagaatatatgagaactccttttaaggattcttctcagaggacgaaccaaaaa
ttaaattctctagttgtcagaaagactccactagcattacttgaatacaatcaaggtagc
cttgactcaaattctcctggttccattttgatgtcccaaccaaaaaaggttactcctgtt
aagcgctcgaaagcagaaggtttcaagctagacctcacacatgaaactccaattactcta
gatcattcttgcaacatagttgatgcaggtttgtttatgggtaggtcatttcgagtgggg
tggggccctaatggcatcctagttcataatggaaatttggtggggagtaagaattcacag
agggtcctttcttccataataaatgtagagaaagtttccattgacaatgtggtgagagat
gaaaatagtaaaatgcgtaaagaattgattgaatttgcttttgatcttcctttaaattta
cacaaggaaatgaatcatgaatttgaagaagaagtgggatccttcaatttgaaacttcaa
aagattgtcttcaatcgtctaatgctttcagatatttgtaggggctatatagatattgtt
gaaaaacagctcgaagttcctggattatcgtcttccactcgtttagtcttgacacaccag
ataatggtctgggaattgataaaagttcttttttctgaaagggaaaatgttgggaatagt
ttcgacgatgataatgaggaagacatgatgcaggatataaaagaagattcaccggaattt
gacttggaagcactccctcttattcggagggctgaattcagctgttggctacaagagagt
gtttttcctcaggtgcagtatgacttaggttcattaaaagattccagttatcttgaacat
atatttcttctcatgactgggcggcagctggatgcagcagtgcaacttgcttcttctaaa
ggtgatgtgagacttgcttgtttgctgagccaggctggtggattcactgttggatccact
gtgaagcggaatgatgttgctctacaacttgatatttggagaaggaatggattggatttc
aactttattgagaaggaacggacacagttatatgagttgctggcagggaatatatttgat
gctttgcatgactttgacctcgactggaagagatttctagggctgttgatgtggtatcgt
ctgccaccagacaccactcttcctgtaatatttcactcttatcagcatcttcttaagagt
ggaagggctccactccctgttccagtttatgctgatgggcctcaagaactggctttgaag
tctaatacgaatgaatgtcttgacctctcatattttctcatgctgcttcatgctaatgaa
gatcctgaatttggctttcttaagaccatgtttagtgccttctcatcaacagatgaccca
cttgattatcacatgatctggcatcagcgtgcagtgttggaagctattggtgcaatcagt
tataaagatctgcatattcttgatatgggattcgtttctcaattgctgtgtttggggcaa
tgtcactgggccatctatgtggtccttcacatgcccttccgtgatgattttccacacctc
caggctaaagttatcaaggaaatactattccaatactgtgaaatatggagttcacaggaa
tcgcaatttgaatttattgagaacttgggtgttccaagaatatggctacatgaggctatg
gccgtttttttcagttaccttgggaatctaccagaggccctcgaacatttcattgaatgt
agaaattggcataaagctcatactatttttacaacttcagttgctcataaattattcctt
tcagctgagcattcagatgtatggaagtttgctacttcaatggagatgcacaagtctgaa
atagaaaattgggaattcggtgctggaatttatatatcattctactctctgaggagttct
ttgcaggaaaacactgaagggagtgtactggattcacttgagagtagaaatgttgcttgt
ggagaatttatcggtcgacttaatgaatcattggcagtttggggtgatagattaccagtt
gaggcaagagttgtttactccaagatggccgaggagataagtagattacttctatcagat
attggggagggttctactcgtgatgctcagttgagttgctttgacactatattttctgcc
ccaatgcgagaggatcttcgctcaagtcacttgcaggatgcagtttctctttttacttgt
tacctgtcagaaatctcatcatag
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integrated database retrieval system
