Cucumis melo (muskmelon): 103491483
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Entry
103491483 CDS
T03195
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cmo03021
]
103491483
03036 Chromosome and associated proteins [BR:
cmo03036
]
103491483
Transcription machinery [BR:
cmo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
103491483
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
103491483
SLIK complex
103491483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
103491483
NCBI-ProteinID:
XP_008449672
UniProt:
A0A1S3BNH7
LinkDB
All DBs
Position
5:1296985..1317469
Genome browser
AA seq
1760 aa
AA seq
DB search
MAFFRNHSNEPGSHGVLEDKGQGQVTDRTHTSAGNDEEDMSTDKEFNMNMDAPYHRGGQV
DDNSRFQNEPAADDGIATRMSNLQNSGRRTAVGRRWGSTFWKDCQPMIHGGSDSAQESKS
ESDNRSGEGSEDNLSNEKDGGSEFEDDDQSKEVKDQRRYTDVPAEDGMLSDEYYEQDGDE
QSDSLPYRGFHNSVKSNRLQSQSVNANSNHMRRNSRVVNDEDDDDGYDEDHNDDADYEED
EEEEDDPDDVDFEPDYGVGSGRSVKKQDKDWDGEDYEEDDGSDDDDLEISDDEGPNYGKK
GRGKPRGKGGRNVKSTSERKVYQSSIRQRKGKFSYEEDESSMEDSASDSVEAFKSSVKTG
THLRKNSGRYSVTAGVSGRRSEVRTSSRSVRKVSYVESEESEEFDEGKKKKSQKEEVEEE
DGDAIEKVLWHQPKGTAEVAIRNNRPIDPVLSSHSFDSEPDWNEVEFLIKWKGQSHLHCQ
WKPFSELQYLSGFKKVLNYTKKVMEEIRYRKSVSREEIEVYDVSKEMDLDLIKQNSQVER
VIADRISKDGSGDVVPEYLVKWQGLSYAEATWEKDVDISFAQDAIDEYKAREAAISVQGK
SVDLQRKKSKVSLRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKT
VQSVSMLGFLQNAQQIYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQ
HEFENKRTGRPIKFNALLTTYEVVLKDRAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLSE
FSTKNKLLITGTPLQNSVEELWALLHFLDPDKFKSKDDFIHNYKNLSSFDEIELANLHME
LKPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLL
NIVVELKKCCNHPFLFESADHGYGGDFDSNDSSKLDRIIWSSGKLVILDKLLMRLHETKH
RVLIFSQMVRMLDILADYMSYRGFQFQRLDGSTKAEFRQQAMDHFNAPGSDDFCFLLSTR
AGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSSSVEEDILER
AKKKMVLDHLVIQKLNAEGRLEKKEAKKGIGFDKNELSAILRFGAEELFKEDKNDEDSKK
RLQSMDIDEILERAEKVEEKEAGGEEGHELLSAFKVANFCSAEDDGSFWSRWIKPEAVSQ
AEEALAPRAARNTKSYAEANQPENSGKRKKGSGPVERVQKRRKGDISAPSAPMIEGASAQ
VRRWSCGNLSKRDALRFYRVVMKFGNESQISLIAGEVGGTVAAAKPEEQIELFNALIDGC
RDAVESGSTDPKGPMLDFFGVLVKANELLNRVEELQLLAKRISRYEDPIKQFRALMHLKP
SNWSKGCGWNQIDDARLLLGVHYHGFGNWEKIRLDEKLGLMKKIAPVELQHHETFLPRAP
NLRDRANALLEMELAALGKSLNSKAGRKTAKKDRENIPKASTSRSLDRKGKPGSPKVNLK
LRDRTSKPQRVETLVKEEGEMSDNEEVYEHFKEVKWMEWCEDVMADEIRTLERLHRLQTT
SAKLPKEKVLSKIRNYLQLLGRRIDQVVFDHEEEPYKQDRMTMRLWNYVSTFSNLSGERL
HQIYSKLKQEKEVGAGPSYLNGTGSALMGRDGDSSHFGALSRHLPRVRGNKNNTSLQISE
PVQKGVETEKFEAWKRRRRGGDADNQYHVPCPPDRPMSNGGRITDPNSLGILGAAPTENR
RFANDRPYRIRQTSFPVRQG
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggccttttttaggaatcattcaaacgaaccaggttctcatggtgtattggaagataaa
ggccagggacaagttaccgatagaactcatacctctgcaggaaatgacgaagaagacatg
agtacagataaagaatttaatatgaacatggacgcaccctatcacaggggaggtcaggta
gatgataacagtaggtttcaaaacgagccagctgcagatgatggaattgctacgagaatg
tcaaacttacaaaattctggaagaagaacggcagtgggtagaaggtggggttcaacattt
tggaaggactgccagcctatgattcatgggggttctgattctgcgcaggagtctaagagc
gagtctgacaatagaagcggagaaggatcagaagataatttatccaatgagaaggatgga
ggttcagaatttgaagatgatgaccaatcaaaagaggttaaagatcaaagaaggtatact
gatgtccctgcagaagatgggatgttgtcagatgaatattacgagcaggatggagatgag
cagagtgattccctgccgtacagggggtttcataactcagtaaagtcgaataggttgcag
tcacagtctgttaatgccaacagcaatcacatgcgaagaaattctagagttgtgaatgac
gaagatgatgacgatggatatgatgaagaccataatgatgatgccgattatgaagaggat
gaggaagaagaagatgaccctgacgatgttgacttcgaacctgattatggcgttggaagt
ggccgctcagtgaagaagcaggacaaagactgggatggtgaagattatgaggaagatgat
gggagtgatgatgatgatttagagatttctgatgatgaaggacctaattatggaaagaaa
ggcaggggaaagccacgaggtaaaggaggacgcaatgtaaaatctaccagtgaacgtaaa
gtataccaatcatctattcggcaaagaaaaggaaaattctcatatgaagaggatgaatca
tcgatggaggattctgctagtgatagtgttgaggcttttaaaagttcagtgaaaactggc
actcaccttcgcaagaatagtggccgctattctgtaacagcaggtgtttcaggacgacga
agtgaggtcagaacttctagtaggtcagttcgaaaagtttcatatgttgaaagtgaagaa
agtgaagaatttgatgagggcaaaaagaaaaagtcccaaaaggaggaagttgaagaggaa
gatggtgatgcaattgaaaaagttctctggcaccagccaaagggcactgctgaagttgct
ataagaaataacagaccgatagatcctgtcctgtctagtcattcatttgattctgaacca
gactggaatgaggtggaatttttgataaaatggaaaggccagtcgcatttacactgtcaa
tggaaaccattctctgaactacaatatcttagtggttttaagaaggttttaaactacact
aaaaaggtcatggaggaaatcaggtacaggaagagtgtctcccgtgaggagatcgaggtc
tatgatgtcagtaaggaaatggatttggatctcatcaagcaaaatagtcaggtggagaga
gttattgctgaccgtatcagcaaagatggttcaggtgatgtagtaccagagtatttggta
aagtggcaagggttgtcttatgccgaagcaacttgggaaaaggatgtagacatttcattt
gcacaagatgctattgacgagtataaggctcgtgaagctgcaatatctgtgcaagggaaa
tcagttgatcttcagcggaaaaagagtaaagtgagtttaaggaaacttgatgaacagcct
gagtggttgaagggaggcaagcttcgagactatcagcttgagggtttgaattttcttgtt
aatagttggagaaatgatactaatgtaattttagctgatgaaatgggtcttgggaaaact
gttcagtctgtttccatgcttggctttctacagaatgcccaacaaatttacggtccattt
cttgttgttgtaccactgtccaccctgtcaaactgggctaaagaatttaggaagtggctg
cctgatatgaatgttattgtctatgtcggtacccgtgccagcagagaggtttgtcagcag
catgaatttgaaaataaaagaaccggcagacctataaagtttaatgcattgttgactacg
tatgaagttgttctgaaggaccgtgccgttctttcaaagattaagtggaattatttgatg
gttgatgaagcacatagattaaagaatagtgaggcacagttgtatacgaccctttcggaa
tttagcacaaaaaataaattgctcattactggtactccgttgcagaacagtgtggaagag
ctatgggctctgctgcactttcttgatcctgataagttcaagagtaaggatgattttatt
cataattacaagaaccttagttcgttcgatgagattgagcttgctaatctccacatggaa
ctgaagcctcacatcctgcgtcgtgttatcaaggatgtcgagaagtctttgcctcctaaa
attgagcgtattcttagggtagagatgtctccgcttcagaaacaatattacaagtggatt
ttagagcgcaactttcatgacttaaacaaaggagttcgtgggaatcaggtttctcttttg
aacattgtggtggagttaaagaaatgctgcaatcacccctttctgttcgaaagtgcagat
catggttatggtggggacttcgactcaaatgatagcagcaagctggatagaataatctgg
agcagcgggaagttagttatacttgataaattgttaatgagattgcatgaaacaaagcat
cgggttctgattttttcacagatggttagaatgcttgatattctggctgactacatgtca
tatagaggattccaatttcagaggcttgatggaagtacaaaggctgagtttcggcagcag
gctatggatcatttcaatgcacctggtagtgatgatttttgcttccttctttcaactcga
gctggtggcttaggtataaaccttgcaacagcagatacagttatcatatttgattcagac
tggaacccacaaaatgacttacaggctatgagtagagctcacagaattggacaacaggaa
gtagttaatatatacagatttgttacaagcagtagtgttgaggaagatatcttggagcga
gcaaagaaaaagatggttcttgaccatctggtaatccaaaaattaaatgcggagggtaga
ttggagaagaaagaagcaaagaaaggcattggttttgataaaaatgagctatcagcgatc
ttaagatttggggctgaggaacttttcaaggaggacaagaatgatgaagatagtaagaaa
cgacttcaaagtatggatattgacgagattcttgagagggcagagaaggttgaagaaaaa
gaagcaggaggagaggaagggcatgaattgctgagtgctttcaaggttgctaacttttgt
agtgctgaagatgatggaagtttttggagtcgttggataaaacctgaagccgtgtctcag
gctgaagaagctctcgctcctcgtgctgccaggaatacaaagagctatgcagaggctaat
caacctgagaatagtggtaaaagaaaaaaaggatctgggcctgtggagagggttcagaaa
cgccgtaaaggtgatatttctgctccttcagcaccaatgattgagggtgcatctgctcaa
gtgagaaggtggtcttgtgggaatttgtcgaaaagagatgcattacgtttttatcgtgtg
gttatgaaatttgggaatgagagtcaaattagcttgatagccggtgaggttggcggtaca
gttgcagcagctaagcctgaagagcaaatagaacttttcaatgctttaattgatggctgt
cgagacgctgttgaatcaggatcaacagatccaaagggacctatgttagatttctttggt
gtgctagtgaaagctaatgagcttctcaatcgagttgaagaacttcagcttctagcaaaa
agaattagccgctatgaagatcctattaaacaatttcgtgccttgatgcacctgaaacct
tcaaattggtcaaaaggttgtggttggaaccaaattgatgatgcaagattacttttggga
gtacactatcatggtttcggtaattgggaaaagatcaggttggatgagaaactcggtctc
atgaaaaagattgctccagtggaacttcaacatcatgagaccttcctgccacgtgctcca
aatttgagagatcgtgctaatgcgcttctggagatggaacttgctgccctcggtaaaagt
ctgaattctaaagctggtcgcaagactgcaaagaaggatagggaaaatatcccaaaagct
tcgacatcgcgtagcttggatcgaaaggggaaaccaggttctcccaaggttaacctaaaa
ttgagggaccggacttctaaacctcagagagttgagaccctggtgaaggaggagggtgaa
atgtctgacaacgaagaagtatatgagcattttaaggaagttaaatggatggaatggtgt
gaagatgtcatggctgatgaaattagaactctagaacgacttcatagattacagacaact
agtgccaaactcccaaaggaaaaggtgctttcgaaaattcgcaattacttgcagcttctt
ggacgaaggatagatcaagttgtttttgatcacgaggaagaaccatataaacaagatagg
atgactatgcgattgtggaattatgtctccaccttttcaaatttatctggggagagactt
catcaaatttattcaaaactcaagcaagaaaaagaagtgggagcaggtccatcctatctc
aatggcactggctctgctcttatgggcagggatggggactcctctcattttggagcctta
tctcgtcatcttccaagggtacgggggaacaaaaataatacttccttacaaatatctgaa
ccagttcagaagggggttgaaaccgagaaattcgaagcatggaaacgacgaagaagaggg
ggggatgcggataaccaataccatgttccttgtccacctgatagacccatgagtaacggt
ggtcggataacagatccgaactcattggggattcttggggcagcaccaaccgagaacagg
aggtttgctaatgatcggccatataggattcgtcaaactagttttcctgtgagacaaggt
tga
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