Cucumis melo (muskmelon): 103491582
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Entry
103491582 CDS
T03195
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103491582
03041 Spliceosome [BR:
cmo03041
]
103491582
03036 Chromosome and associated proteins [BR:
cmo03036
]
103491582
Enzymes [BR:
cmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103491582
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103491582
mRNA cycle factors
Common to processing body (P body) and stress granule
103491582
Spliceosome [BR:
cmo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103491582
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103491582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Mcm-like_N
Motif
Other DBs
NCBI-GeneID:
103491582
NCBI-ProteinID:
XP_008449803
UniProt:
A0A1S3BM96
LinkDB
All DBs
Position
5:551174..557581
Genome browser
AA seq
624 aa
AA seq
DB search
MRTSWADLAASSAAENVAAGSANNCSAGTTTAPGRSAYVPPHLRNRTAPSDLPAAANSGP
AVGNDRSGHAGSRWGGGPRNDYNNRSGYSGGSRGGGWGGSRGGGWDRGRGDREVNPFGDE
EDTEEAFGEQENTGINFDAYEDIPVETSGENVPPPVNTFAEIDLGDALNQNIRRCKYVKP
TPVQRHAIPISLAGRDLMACAQTGSGKTAAFCFPIISGIMKGQSMPRPARGARTVYPLAL
ILSPTRELSMQIHEEARKFSYQTGVRVVVAYGGAPINLQLRDLERGVDILVATPGRLVDL
LERAKVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGVRQTMLFSATFPREIQ
RLASDFLDKYIFLAVGRVGSSTDLIAQRVEYVHEPDKRSHLLDLLHAQRANGVQGKQSLT
LVFVETKKGADALEHWLCLNGFPATTIHGDRTQQEREQALRSFRSGNTPILVATDVAARG
LDIPHVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNMSLARSLADLMTESN
QEVPDWLIRFGARSAYSGGRNRRSGGGRFGSRDYRRESSFNRGGSDYYGGGNNNSGGGYG
GGSGGYGGGGGGGFSGSGVTSAWD
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttcgtgggcagatttggctgcaagctcggctgctgagaatgtagctgctggt
tctgctaacaattgtagtgctggaactactacagcacctggccgatcggcttatgtaccc
ccacatctgcggaatcgcacagccccatccgatctgcctgctgcagcaaatagtgggcct
gctgtgggtaatgatcgttctggacatgcagggtctcgctggggtggtggtccccggaac
gattataataatcgatccggttatagtggtggtagtcgtggaggaggatgggggggaagt
agaggaggtggatgggatcgtgggaggggggatcgggaagtgaatccatttggagatgag
gaggatacagaggaagcatttggagagcaagaaaataccggtattaattttgatgcttat
gaagatattcctgtggaaacaagtggcgaaaatgtaccccctccggtgaatacgtttgct
gaaattgatttgggtgatgcacttaatcaaaacattcgacggtgcaagtatgtaaaacca
acacctgtccagcggcatgctattcctatctctcttgcagggagagacttaatggcttgt
gctcagactggatctggaaagactgctgctttttgtttccccattatcagtggcataatg
aagggccagagtatgccgagaccagctcgaggtgcacgcacagtttacccacttgctctc
attctctctccaactagggagctttcaatgcaaatacatgaagaagcaaggaaattctct
tatcaaaccggggtcagagtggtggttgcttatggaggtgcaccaatcaacctacagcta
cgtgatctagaaagaggtgttgatattcttgttgcgactccaggaagattagtagatttg
cttgaaagggctaaagtttcactgcagatgataagatacttggcccttgatgaagcagac
cgcatgttagatatgggatttgagccccaaatcaggaaaatagtagaacaaatggacatg
cctccacctggtgtaaggcagactatgctgttcagtgcaacttttccaagggagattcag
agacttgcctctgattttctagacaagtatatatttctggctgttggaagagtgggttcg
agcactgatctaattgctcaaagagttgagtatgttcatgaacctgacaagagaagtcat
ttattggaccttcttcacgcacagagggcaaatggtgtgcagggaaagcaatctcttact
ctggtttttgtggagacaaagaagggagctgatgctcttgaacattggttatgcctcaat
ggttttcctgccactaccattcatggtgatagaacacaacaggaaagagaacaagcattg
aggtcgtttcgaagtgggaacacaccgattttagtggcaactgatgtagctgctcgaggg
cttgacattcctcatgttgcacatgtggtgaacttcgatctccctaatgacatcgatgat
tatgttcatagaattggacgaacggggagagctgggaaaactggtttagcaactgccttt
tttaacgagaacaatatgtccttggcaagatccttggctgatctgatgacagaatcaaat
caggaagttcctgattggctaatacgatttggtgccaggtctgcatacagtggaggaaga
aaccgtcgttctgggggaggccgatttggtagccgtgactatagaagagaaagctctttc
aacaggggtggttccgattattatggtggaggcaacaacaacagtgggggtggttatggt
ggtggttctggtggatatggaggaggaggtggaggaggattcagtggttcaggggtgact
agtgcatgggactaa
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