Cucumis melo (muskmelon): 103491641
Help
Entry
103491641 CDS
T03195
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cmo04131
]
103491641
04121 Ubiquitin system [BR:
cmo04121
]
103491641
Enzymes [BR:
cmo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103491641
Membrane trafficking [BR:
cmo04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103491641
Ubiquitin system [BR:
cmo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103491641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
RING_XB3-XBAT31
Zf_IFT144_1st
PRC2_EED_ins
zf-RING_5
zf-HC5HC2H
DUF7560
Motif
Other DBs
NCBI-GeneID:
103491641
NCBI-ProteinID:
XP_008449904
UniProt:
A0A1S3BNR7
LinkDB
All DBs
Position
5:129210..131048
Genome browser
AA seq
366 aa
AA seq
DB search
MDELIATRYWCHMCSQMVNPIVDVEIKCPFCRSGFVEEIGNGISSDNNDNNNNNNNNNEL
ESDFGSERALSLWAPILLGMMGNPRGRRRFRHLEFDDDDDDNEHEDGEGNHVSSETTELD
SVIRRRRSSATILQLLQGIRAGIATAESENSYEGERSRERERVILINPFNQTIVVQGGEN
QNQNHNSIGSLGDYFVGPGLDLLLQHIAENDPNRYGTPPAQKEAVDALPTVRVELEEDSR
LQCSVCLDEFEVDEEAKEMPCKHKFHTGCILPWLELHSSCPVCRHQLPGDESKRDVDGGS
AARFMSDLNNGNGNGNGNGSGEIEERNSSESGRRFSFPWPFNGLFTSQGNSSAGSASDSQ
RDHTSI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atggacgagttaattgcaaccagatattggtgtcacatgtgttctcaaatggtgaatccc
atcgttgacgtggaaattaaatgccccttctgccgcagcggctttgttgaggagatagga
aacggtatttccagcgacaataacgataacaacaacaataacaataataacaatgagctc
gaatccgattttgggtcggagcgagctttgtctctctgggctccgatcttgctgggtatg
atgggaaatccccgtgggcgacgaagattcagacatctagagtttgacgacgacgatgat
gataatgagcatgaggatggagaggggaatcatgtgagtagtgagacgactgagcttgat
tcagtcattaggaggaggagaagttcagctaccattcttcagttgctccaaggtatcagg
gctggaatcgcaactgctgaatcagagaatagttatgagggagagaggagcagagaaaga
gagagggttattcttataaatcctttcaatcagaccattgtagttcaaggaggtgagaat
caaaatcaaaaccataactccattgggtcgctgggtgattatttcgtaggacctggtttg
gatttgttattgcaacatatagccgagaatgatcccaacagatatggcactccaccagca
cagaaggaggcagttgatgcgctgcccaccgtgagggttgaacttgaggaggatagccgt
ttgcaatgttcagtgtgtttggatgagtttgaggtggatgaagaagccaaagagatgcca
tgtaagcataaatttcatacaggttgtatcctgccatggctggagctgcatagttcttgc
ccagtttgtaggcatcaattgcctggggatgaatccaagcgtgatgtagatggtgggtct
gctgccaggttcatgagcgacctcaataatggtaatggtaatggtaatggcaatggcagc
ggggagattgaggagagaaattcatccgagtctgggaggaggttttcgtttccatggcct
tttaatggcttgtttacttcccaaggaaactcctcggctggaagtgcgagtgattctcaa
agggatcacacttccatttga
DBGET
integrated database retrieval system
