Cucumis melo (muskmelon): 103491889
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Entry
103491889 CDS
T03195
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cmo
Cucumis melo (muskmelon)
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
103491889
Enzymes [BR:
cmo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
103491889
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
103491889
NCBI-ProteinID:
XP_050942189
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Position
6:complement(20289635..20303620)
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AA seq
683 aa
AA seq
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MKKPSVNLTVCFIAVVVVVVSFFFFCLGHNGYRIRTSPVRRYLRDIDINNSSRLFNVTLQ
RKGGYVIMDNGIVQVTLSTPDGDVVGLSYNGIPNILETKNEEQNRGYWDAVWNNPDEPIA
TDRLKGESYEVIIGNEEQLEISFNKTWSSGVGNETVPVNVDKRYVLLRGSSGFYSYGIFE
RPTGWPQIEMDQVRIVFKLQSQMFDYMAVSDDRQRVMPTMLDRENGEPLAFPEAVLLTNP
SNEELRGEVDDKYQYSTEDKDNQVHGWICSDPPVGFWMITPTDEFRVAGPVKQDLTSHAG
PITLSMFVSTHYAGKDIGMRFAAGEPWKKVFGPVFVYLNSVSPEEDSLSLWEDAKQQLAI
EINDWPYTFPQSEDFPSSAQRGSVTGQLLVRDGYISSRLMRASNAFVGLALPGPVGSWQT
ESKGYQFWTQADNHGNFLIKNIRVGVYNLYAFVPGFIGDYKYKANITIEFGSEINLDVMV
FDPPRQGPTLWEIGFPDRTAAEFYVPDPYPTLMNKLYNNHADKFRQYGLWERYAAIYPNN
DLVFTVGVDDYTVDWFYAHVNRNVGNQTYEATTWEIRFFLQSVNQTANYTLQIALASAAE
CELQVRLNNRESEQSAFSTGRIGKDNAIARHGIHGLYWLYSIPFPGDQFLQGNNSIYLTQ
ARSESPFEGLMYDYIRLEAPPLT
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagccatcggttaatttgaccgtttgcttcatagctgtggttgtcgtcgttgtc
tccttcttcttcttctgtctcggtcacaatggctatcggattcggacatcaccggtcagg
agatacctaagggacatagacatcaacaattcttcgagactattcaatgtaacactacaa
agaaaaggtggatatgttataatggacaatggcattgtccaagttactctttcaactccc
gatggcgacgtggttggattgagctacaatggaatccccaacattctcgaaaccaaaaac
gaagagcaaaacagaggctactgggacgccgtatggaacaacccagacgaacccattgcc
acggacagattaaaaggagagagttatgaagtgataatagggaacgaggagcaactagaa
atatcgtttaacaaaacatggagttctggagttgggaatgagacggtgcctgtaaatgtg
gacaaaagatacgtattgctgagaggaagctctgggttttatagttatgggatattcgag
aggcccactgggtggccccagattgaaatggatcaagttagaattgtttttaagcttcaa
agccaaatgtttgattatatggctgtgtcggacgataggcagagagtgatgcccacaatg
ctagaccgtgaaaatggtgagccattggcttttcccgaggctgttcttttgactaatcct
tccaatgaagagctcagaggagaggtggatgacaagtaccaatactcaacagaggacaag
gacaaccaagttcacggctggatctgcagtgatccgccggtgggattctggatgatcact
cccaccgacgagttccgggttgccggtccggtcaagcaggatctcacctcccatgccggc
cccatcactctctccatgttcgttagcactcactacgctggaaaggatattggcatgaga
tttgcagctggagagccctggaagaaggtcttcggccctgtctttgtttatctcaactct
gtttcccctgaagaggattctctatccctctgggaagatgccaaacaacagttggcaata
gaaatcaacgactggccctatacttttcctcaatcagaagacttcccttcttctgcacaa
agagggagcgtcacaggccagttattagttcgtgatgggtacatcagtagccgacttatg
cgggcgagtaatgccttcgttggattggcattgcctggtcctgttggatcttggcagacg
gaaagcaagggctatcagttctggactcaagctgacaatcacggcaacttcttaatcaag
aacatccgagttggggtttacaatctgtatgcttttgtccctggcttcattggagactac
aaatacaaggcaaacattacaatcgagtttgggtctgaaatcaacttggatgtaatggtg
tttgatccaccgagacaaggccctaccctctgggaaattggctttcccgatcgcactgca
gcggagttttatgtgcctgacccttatccaactctcatgaataaactatacaacaaccat
gctgacaagttcagacagtatggcttgtgggaacgttatgcggctatttatccaaataat
gatcttgtgtttactgttggtgtcgatgattatacagtggactggttctatgctcatgtt
aaccggaatgtggggaatcaaacatatgaagcgaccacttgggagatcagattttttttg
caatctgtgaaccaaacagcaaattacacactgcaaattgcattagcatctgctgctgag
tgcgaattacaggttcgattaaacaatcgagaatcagagcagtctgctttttcgacaggt
aggattggaaaggacaacgcaattgcaaggcatggcattcacggactttactggttatac
tccatacctttccctggcgaccaatttctgcaaggaaacaactccatctatctcactcag
gcaagaagcgaaagccctttcgaaggtctcatgtacgactacattcgactggaagctcca
cctcttacatga
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