Cucumis melo (muskmelon): 103492007
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Entry
103492007 CDS
T03195
Name
(RefSeq) nuclear cap-binding protein subunit 1 isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03013
Nucleocytoplasmic transport
cmo03015
mRNA surveillance pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103492007
09122 Translation
03013 Nucleocytoplasmic transport
103492007
03015 mRNA surveillance pathway
103492007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103492007
03041 Spliceosome [BR:
cmo03041
]
103492007
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103492007
Spliceosome [BR:
cmo03041
]
Common components
Common spliceosomal components
Cap binding complex
103492007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
DUF5798
Motif
Other DBs
NCBI-GeneID:
103492007
NCBI-ProteinID:
XP_008450385
UniProt:
A0A1S3BQ48
LinkDB
All DBs
Position
2:6536258..6558956
Genome browser
AA seq
864 aa
AA seq
DB search
MSSWKSLLLRIGDKSPEYGTSSDFKDHIETCFGAIRRELDHYGDEILPFLLQCVEQLPHK
TPLYGTLIGLMNLENEDFVKKVVEKTHKSFQDALNSGHCHKIRILLRFLTALMSSKVLLS
TSLVVVFETLLSSAATTVDDEKGNPAWQARADFYITCILSCFPWGGAELVEQVPEELERV
MVGVEAYLSIRRQTLDTGLSFFEEDGEVEKTLNEKDFLEDLWGRIQMLATGGWKVDSVPR
PHLLFEAQLVAGKSHEFGAIKCPEQPNPPPTLSGVTYGKQKYDAELNYPQRIRRLNIFPS
SKFEDVQPIDRFVVEEYLLDVLLFFNGCRKECASFMVGLPVPFRYEYLMAETIFSQLLLL
PQPPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFEKIADLDMECRIRLILWFSHHLS
NFQFIWPWEEWAYVLELPKWAPQRVFVKEVLDREVRLSYWDKVKQSIENAPGLEELLPPK
GGPSFKFSAEDDGEKSEQHALSAELYNMVKGRAPARELISWLDESVIPKHGLDVSLVVVV
QTLLDIGSKSFTHLITVLERYGQVISRICHDQDKQVLLISEVGSYWKNNTQMTAIAIDRM
MGYRLISNLSIVKWIFSPENLQQYHTSDRPWEILRNVLCKTYNRISDLRKEISSLKKDVV
AAEEAVARTQEELGAAESKLSLVDGEPVLGENPVRLKRLKSYAGRAKEQEISIRDSLEAK
EALLARALEENEILFLSLYKSFSSILTERLPASAQTLQDLKSTNPADTNAMDVEEPSAME
MDNVESRPEKSHLNGRTEHAYTVCENEQWCLTTLGYVKAFSRQYASEIWPHIEKLDAEVL
LSEDSHPLFRKAVYSGLRRSLDLI
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggaagagtcttcttctccgaattggtgacaagtccccggaatatggcacc
tcctccgacttcaaagatcacattgaaacctgctttggtgcgattcggcgggagctagat
cattatggagatgaaattttacctttccttctgcaatgtgttgaacaattgccgcacaag
actcctttatacgggacattgattggattaatgaatttggaaaatgaagacttcgtgaaa
aaagttgtggaaaaaactcacaaaagttttcaggatgccttaaactctggacattgccac
aagatccgaattttgttacggtttctaactgcattgatgagcagtaaagtcctactatcc
acatctcttgtagttgtttttgaaacattactctcttcagctgccacaacagtggatgat
gagaagggaaaccctgcatggcaggcacgggctgacttttacataacttgcattctttct
tgctttccctggggaggtgctgaactggttgagcaagttcctgaagagcttgagcgggtt
atggttggagtagaagcatacttaagcattcgaagacagaccttggacactggcttatcc
ttttttgaggaggatggtgaagtcgagaaaactcttaacgagaaggattttttagaagat
ttatggggacgtatacaaatgttagctactggtggatggaaagtggacagtgttccaagg
cctcaccttctatttgaagctcagctagttgctgggaagtctcatgaatttggagccatc
aaatgtccagagcaacctaatcctcctccaacactatctggcgttacttatggtaaacag
aaatatgatgcagagttaaattatcctcaaaggatacgtcgacttaatatatttccatct
agtaaatttgaggatgtacaacctattgatcgctttgtcgtggaggagtatcttttagac
gtgcttctcttcttcaatggctgtcgaaaggaatgtgcatctttcatggttggccttcct
gtaccttttagatacgagtatcttatggcagagacaattttctcgcagctactcctgcta
cctcaacctccattcaaacctatttattatacactggtcattattgacctttgcaaggct
cttcctggggcctttcctgcagttgtagctggtgcagttcgggccctatttgagaaaatt
gcagatttagacatggagtgccgcatacggttgatactttggttttcacaccatttatca
aactttcaatttatatggccatgggaagaatgggcttacgtattagaacttccaaaatgg
gccccacaaagagtgtttgtgaaggaggttctggatcgagaggtccgtctatcatattgg
gataaagtaaagcagagcattgagaatgcacctggtttagaagagttgctacctcccaag
ggtggaccaagcttcaaattttccgcagaagatgatggagagaaaagtgaacaacatgca
ctttctgctgaattatacaatatggtgaaaggacgagctccagcacgtgaactcatttca
tggttggatgaaagtgtaattccgaagcatggtttagatgtttctctcgtcgtggtcgtg
caaactcttctggatattgggtcaaagagtttcactcatttgataacagtcttggagaga
tatggacaagttatttcaagaatatgccatgatcaggataagcaggtcttgcttatatct
gaagtgggatcttactggaagaataatactcaaatgacggcaatagcaattgatagaatg
atgggctataggttaatttccaatttgtccatcgttaaatggatcttttctccagaaaat
cttcagcaatatcatacatcagatcgtccatgggagatattaaggaatgtgttatgcaag
acgtataatcgtatttctgatcttagaaaagaaatatcctccctgaagaaagacgttgtt
gcagctgaagaagctgttgctaggacacaggaagaattgggtgctgctgaatcaaagctc
tcacttgtggatggtgaacctgttttgggagagaatcctgtgagattgaagcgattgaaa
tcttatgctggaagagcaaaagagcaggagatatcgatacgggactctttagaagccaaa
gaagctcttcttgctcgagctctcgaggagaatgagatattatttctatctttgtacaaa
agtttttccagtatattgacagaacgccttccagctagtgcgcaaactctgcaggatttg
aagtctactaatcctgctgatacgaatgctatggatgttgaagaaccatcagccatggag
atggacaatgtagagtcaagacctgaaaaaagtcatttgaatggtagaacagagcatgcc
tacacggtatgtgaaaatgaacaatggtgtttaaccaccttgggatatgtcaaggccttc
tcgaggcaatatgcttccgagatatggcctcatattgagaagttggatgcggaagtcctg
ttatcagaagattcacacccacttttcaggaaagctgtctacagtggccttcgtcgatct
ttggacttgatctaa
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