Cucumis melo (muskmelon): 103492008
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Entry
103492008 CDS
T03195
Name
(RefSeq) RNA-binding protein Y14
KO
K12876
RNA-binding protein 8A
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03013
Nucleocytoplasmic transport
cmo03015
mRNA surveillance pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103492008
09122 Translation
03013 Nucleocytoplasmic transport
103492008
03015 mRNA surveillance pathway
103492008
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103492008
03041 Spliceosome [BR:
cmo03041
]
103492008
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103492008
Spliceosome [BR:
cmo03041
]
Complex C
Other components
EJC/TREX
103492008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
103492008
NCBI-ProteinID:
XP_008450386
UniProt:
A0A1S3BNH9
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Position
2:complement(6515202..6521606)
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AA seq
197 aa
AA seq
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MASADVEAVDFEPEEDDLMDEDGAAEADASPRAPFPKLKSAITGGASSSLSGGPKKTKGR
GFREESDRNTRLAGSDFDSLKSADGPGPQRSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
IKNLHLNLDRRTGFVKGYALIEYESFEEAEKAISAMDGAELLTQIINVDWAFSHGPIRRK
NARPARERRSRSPRRRY
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggccagcgctgatgtagaggctgtcgactttgaacctgaggaagatgacctcatggac
gaggatggagccgccgaagccgatgcctccccacgagctccatttcctaagctcaaatcc
gccattaccggcggcgcatcttcctcgctttctggtggtccaaagaagactaagggtcgt
ggatttcgagaggagtctgatcgaaacacccgccttgctgggtcggacttcgattccctc
aagtctgctgatggccctggcccccaacgatctattgaaggatggatcattctggtaact
ggtgtacatgaagaggcacaagaggatgatctacaaaatgcatttggtgagtttggggag
ataaagaatttgcatctaaatctcgatcgtcgtactgggtttgtcaagggatatgcgtta
atcgaatacgagagttttgaggaagcagagaaagcaatatctgccatggatggtgctgaa
cttctgacccaaattatcaatgttgattgggcattcagccatggacccatcagaaggaag
aacgcaaggcctgctcgagaacgacgttcgaggagccctaggagaagatactga
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