Cucumis melo (muskmelon): 103492152
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Entry
103492152 CDS
T03195
Name
(RefSeq) serine/arginine-rich splicing factor SR30 isoform X1
KO
K12890
serine/arginine-rich splicing factor 1
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103492152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cmo03041
]
103492152
Spliceosome [BR:
cmo03041
]
Common components
Common spliceosomal components
SR proteins
103492152
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103492152
NCBI-ProteinID:
XP_008450613
UniProt:
A0A1S3BPM4
LinkDB
All DBs
Position
2:complement(706037..711042)
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AA seq
320 aa
AA seq
DB search
MSSRNSRTIYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDVRDAED
AIYGRDGYKFDGCRLRVEFAHGGRGHSSSVDRYSRSGSSRGGVPRRTDYRVLVTGLPSSA
SWQDLKDHMRRAGDVCFSEVFRDRGGMAGIVDYTNYDDMKYAIRKLDDSEFRNAFSRAYV
RVKEYDSRHSYSRSPSLDSRRSDYSRSPSRSPYRGRGRSQSRSRSRSRSRSYSGRSTSLS
PRHKHSRRSRSISEQSLSRSRSRSRSRSRSRSPVSSRHRASRPRSRSRSRSKSRSLSPNV
RSDQSRSRSQSVDSRDQYSE
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagaaacagtcgcaccatctatgttgggaatcttcctggtgacattcgtttg
agagaagtagaagatctgttctacaagtatggacccattgttgatattgatttgaagatt
ccaccacgaccaccgggctatgcttttgttgagtttgaagatgttcgtgatgctgaagat
gcaatttacggccgagatgggtataagtttgatggatgtcgattgcgggtggaatttgcg
catggtggaaggggacactcttcttctgtggatcgttacagtcgtagtggaagtagccgt
ggtggtgttcctcgacgaacagactatcgggttttggttactggattaccttcttctgct
tcatggcaagacctgaaggatcacatgcgtcgtgctggtgatgtctgcttctctgaagtt
ttccgtgatcgtggtggaatggcaggaatagttgattatacaaactatgatgacatgaaa
tatgctattagaaaacttgatgattctgaatttcggaatgccttttctcgagcatatgta
cgggtgaaggaatatgactctagacacagctactccaggagtccatctcttgattctaga
cgaagtgattattctagaagtcccagtcgtagtccatataggggaagaggccgaagccag
agccgaagcagaagtcgaagccgtagccgtagttatagcggcaggagcactagtctatct
ccaaggcacaagcactctcgtcggtcacgttcaatttctgaacaatccctctcaaggtct
aggtcgaggtcgagatcaagatcacggtcacgatcaccagtttcatcccgtcatcgtgca
agcagacctcggagtcggagcagatctcggtccaagtccagatccctttcaccgaatgtg
agatctgatcaaagccgaagccgaagccaatctgttgattccagggaccaatattcagaa
tag
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integrated database retrieval system
