Cucumis melo (muskmelon): 103492327
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Entry
103492327 CDS
T03195
Name
(RefSeq) WD-40 repeat-containing protein MSI4
KO
K10752
histone-binding protein RBBP4
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03082
ATP-dependent chromatin remodeling
cmo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103492327
03083 Polycomb repressive complex
103492327
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cmo03036
]
103492327
Chromosome and associated proteins [BR:
cmo03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103492327
Histone modification proteins
HAT complexes
HATB complex
103492327
HDAC complexes
Sin3A-HDAC complex
103492327
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103492327
PRC2.2
103492327
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103492327
Heterochromatin formation proteins
Other heterochromatin formation proteins
103492327
Chromatin remodeling factors
NuRD complex
103492327
NuRF complex
103492327
NuRF complex (fruit fly)
103492327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
eIF2A
Beta-prop_WDR90_POC16_2nd
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IP5PC_F
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
103492327
NCBI-ProteinID:
XP_008450857
UniProt:
A0A1S3BPL6
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All DBs
Position
2:2097491..2104014
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AA seq
518 aa
AA seq
DB search
MDSSQPQQQQQQQQPPQQQQTPPPPQQQTPVVKKKETRGRKPKPKDEKKDEQQTKKMKAQ
QQPSVDERYTQWKSLVPVLYDWFANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDG
SVPNTLVIANCEVVKPRVAAAEHISQFNEEARSPFVKKYKTIIHPGEVNRIRELPQNSRI
VATHTDSPDVLIWDVEAQPNRHAVLGATNSRPDLILTGHQENAEFALAMCPTEPYVLSGG
KDKLVVLWSIQDHITTSATEAGASKSPGSGGSIIKKPGEANDKASDGPSIGPRGVYHGHE
DTVEDVTFCPSNAQEFCSVGDDSCLILWDARTGSSPAVKVEKAHNADLHCVDWNPHDDNL
IITGSADNSIRLFDRRNLTSNGVGSPIYKFEGHKAAVLCVQWSPDKSSVFGSSAEDGLLN
IWDYDKVGKKTERATRTPAAPPGLFFQHAGHRDKVVDFHWNAADPWTVVSVSDDCDTTGG
GGTLQIWRMSDLIYRPEEEVLAELEKFKSHVIECAAKP
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggactcttctcagccgcagcaacaacaacaacaacaacaaccacctcaacagcagcag
acaccgccgccgccgcagcagcagacacctgttgtgaagaagaaggaaaccagaggccgt
aaacccaagccgaaggacgagaaaaaggacgaacaacaaactaagaagatgaaagctcaa
caacaaccttccgttgatgagcgttatactcagtggaagtctcttgttcctgttctctat
gactggtttgctaaccataatctcgtttggccttctctctcttgccggtggggtcctcag
cttgagcaagctacgtataagaatcgacagcgactttatctttctgaacagactgatggc
agtgttccaaatacactggttattgcaaattgtgaagttgtgaagcctagagttgcagct
gcagagcacatttctcagttcaatgaagaagcacgctcaccatttgtgaagaagtacaag
actatcatacaccctggtgaggttaacagaattagggaacttccccagaattctcgaatt
gttgccacacacactgatagtccagatgtcctcatatgggatgttgaggcacaacctaac
cgtcatgctgtccttggtgccacaaattctcgcccagatttgatcctgactggtcatcaa
gaaaatgccgagtttgctctagcaatgtgccccactgaaccttatgttctctctggaggg
aaggacaaattagtcgttttatggagtatccaggaccacataacaacttctgccacagag
gctggtgcttcaaaatcaccaggatctggaggatctatcataaagaagcctggagaggca
aatgataaagcttctgatggcccttctattgggccacgaggagtttaccatggacacgag
gataccgttgaagatgtgaccttctgtccatccaatgcacaggagttttgcagtgttgga
gatgattcttgcctaatattatgggatgcccgtactggctcaagccccgctgtcaaggtc
gaaaaggcacataatgctgatcttcattgtgttgattggaatccccatgatgacaatctt
ataataacagggtcagcagataattctattcgtttgtttgatcgtcggaatctcacttct
aatggcgttggctcgccgatctataaatttgagggccacaaagcagctgttctttgtgtt
cagtggtccccagataaatcatctgtctttggaagttcagcagaagatgggctgttaaat
atttgggattatgataaggttggtaaaaagacagagcgtgctacaagaacgcctgctgct
cctcccggtttatttttccagcatgctgggcacagggataaagtcgttgacttccattgg
aatgcagctgatccatggactgttgtgagtgtgtctgacgattgtgatacaactggtgga
ggagggactttgcagatttggcgcatgagtgacctaatttataggccagaagaagaggtg
ttagctgagcttgaaaagttcaaatctcatgtaattgaatgtgctgcaaagccttga
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