Cucumis melo (muskmelon): 103492340
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Entry
103492340 CDS
T03195
Name
(RefSeq) THO complex subunit 6
KO
K13175
THO complex subunit 6
Organism
cmo
Cucumis melo (muskmelon)
Pathway
cmo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cmo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103492340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cmo03019
]
103492340
03041 Spliceosome [BR:
cmo03041
]
103492340
Messenger RNA biogenesis [BR:
cmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103492340
Spliceosome [BR:
cmo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103492340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
103492340
NCBI-ProteinID:
XP_008450878
UniProt:
A0A1S3BQ99
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Position
2:complement(2313414..2321620)
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AA seq
369 aa
AA seq
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MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN
QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH
LCTFCCQYR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgttggcggacgcaacaaattgggacgaagctgcctacagagagagtatatataaagaa
agagagattcaaactcgtactgtgttcagaactgcctgggcgccttctttaaatggctgc
cctgagaccattgtagctgcatccagtgatggatccgttgcctcttattctattgcttct
tgcatctctaagctgcaatttggttatggaaatactaaaagtttgttagcagcagagcct
cattgcttccttcaagggcacgatgggcccacatatgatgtcaaattttatgacaatggc
gacaatactctattactgagctgtggggatgatggtcacattcgaggatggaggtggaga
gattgtacagatatagaagtgcccatttatttgcaaggtagtcatattgagcctgtaatg
gacctgatgaatcctcaattcaaaggtccttggggtgctctttctccaatccccgaaaat
aatgcaattgctactgatgcccagagtggatccattttctctgctgctggagattcttgt
gcgtattgttgggatttggagagcggtaaagtaaagatggtgtttaaggggcactctgac
tacttgcactgtattgttgctcgaaacactgtcaatcaaatcataactggttcagaagat
ggtacagcacgaatatgggattgcaagagtggaaagtgcattcaactaattgaccctgct
aaggataagaagctgaaagggcatttctcatttgttagatgcattgctcttgatgcaagt
gaaagctggttggcctgtgctgatggtcggagtttatctgtttggaaccttccgtcttct
gaattcatttcaaaaactttgacccgttcttcattgcaggatatggttttttgtgataat
caaatattaggtgttggagcagagccattcctaactcgcttcgacataaatggatcagtg
ctttcacaaatacaatgcgcccctcagtcagctttttctgttgcattgcatccatctggc
gttgcagcagttggagggtacggtggtctcatcgatgttatctcgcagtttggaagtcac
ttatgcacattctgctgtcaatacagataa
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integrated database retrieval system