KEGG   Cucumis melo (muskmelon): 103492340
Entry
103492340         CDS       T03195                                 
Name
(RefSeq) THO complex subunit 6
  KO
K13175  THO complex subunit 6
Organism
cmo  Cucumis melo (muskmelon)
Pathway
cmo03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:cmo00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103492340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cmo03019]
    103492340
   03041 Spliceosome [BR:cmo03041]
    103492340
Messenger RNA biogenesis [BR:cmo03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103492340
Spliceosome [BR:cmo03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103492340
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st EIF3I WDR55 Beta-prop_CAF1B_HIR1 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_EML WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_IFT122_1st Ge1_WD40 Beta-prop_WDR19_1st
Other DBs
NCBI-GeneID: 103492340
NCBI-ProteinID: XP_008450878
UniProt: A0A1S3BQ99
LinkDB
Position
2:complement(2313414..2321620)
AA seq 369 aa
MLADATNWDEAAYRESIYKEREIQTRTVFRTAWAPSLNGCPETIVAASSDGSVASYSIAS
CISKLQFGYGNTKSLLAAEPHCFLQGHDGPTYDVKFYDNGDNTLLLSCGDDGHIRGWRWR
DCTDIEVPIYLQGSHIEPVMDLMNPQFKGPWGALSPIPENNAIATDAQSGSIFSAAGDSC
AYCWDLESGKVKMVFKGHSDYLHCIVARNTVNQIITGSEDGTARIWDCKSGKCIQLIDPA
KDKKLKGHFSFVRCIALDASESWLACADGRSLSVWNLPSSEFISKTLTRSSLQDMVFCDN
QILGVGAEPFLTRFDINGSVLSQIQCAPQSAFSVALHPSGVAAVGGYGGLIDVISQFGSH
LCTFCCQYR
NT seq 1110 nt   +upstreamnt  +downstreamnt
atgttggcggacgcaacaaattgggacgaagctgcctacagagagagtatatataaagaa
agagagattcaaactcgtactgtgttcagaactgcctgggcgccttctttaaatggctgc
cctgagaccattgtagctgcatccagtgatggatccgttgcctcttattctattgcttct
tgcatctctaagctgcaatttggttatggaaatactaaaagtttgttagcagcagagcct
cattgcttccttcaagggcacgatgggcccacatatgatgtcaaattttatgacaatggc
gacaatactctattactgagctgtggggatgatggtcacattcgaggatggaggtggaga
gattgtacagatatagaagtgcccatttatttgcaaggtagtcatattgagcctgtaatg
gacctgatgaatcctcaattcaaaggtccttggggtgctctttctccaatccccgaaaat
aatgcaattgctactgatgcccagagtggatccattttctctgctgctggagattcttgt
gcgtattgttgggatttggagagcggtaaagtaaagatggtgtttaaggggcactctgac
tacttgcactgtattgttgctcgaaacactgtcaatcaaatcataactggttcagaagat
ggtacagcacgaatatgggattgcaagagtggaaagtgcattcaactaattgaccctgct
aaggataagaagctgaaagggcatttctcatttgttagatgcattgctcttgatgcaagt
gaaagctggttggcctgtgctgatggtcggagtttatctgtttggaaccttccgtcttct
gaattcatttcaaaaactttgacccgttcttcattgcaggatatggttttttgtgataat
caaatattaggtgttggagcagagccattcctaactcgcttcgacataaatggatcagtg
ctttcacaaatacaatgcgcccctcagtcagctttttctgttgcattgcatccatctggc
gttgcagcagttggagggtacggtggtctcatcgatgttatctcgcagtttggaagtcac
ttatgcacattctgctgtcaatacagataa

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